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Experiment herm2, region R11.

Sample reads: 4,848,699. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 18328.32 3780.05 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. R05G6.7 vdac-1 16618.00 3427.31 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
3. F13B10.2 rpl-3 16400.31 3382.41 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
4. Y18D10A.17 car-1 14947.71 3082.83 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
5. T27E9.1 ant-1.1 14864.73 3065.72 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
6. F31E3.5 eef-1A.1 13781.14 2842.23 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
7. F36A2.6 rps-15 13476.56 2779.42 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
8. E04A4.7 cyc-2.1 13348.68 2753.04 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
9. F42C5.8 rps-8 13320.37 2747.20 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
10. Y24D9A.4 rpl-7A 12931.84 2667.07 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
11. C49H3.11 rps-2 12441.78 2566.00 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
12. Y105E8A.16 rps-20 12341.23 2545.27 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
13. C04F12.4 rpl-14 12177.23 2511.44 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
14. Y71F9AL.13 rpl-1 12076.68 2490.71 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
15. RIT1P.688 11918.53 2458.09
16. R13A5.8 rpl-9 11767.22 2426.88 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
17. Y48B6A.14 hmg-1.1 11356.24 2342.12 HMG [Source:RefSeq peptide;Acc:NP_496970]
18. F56E10.4 rps-27 11195.16 2308.90 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
19. B0041.4 rpl-4 11146.35 2298.83 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
20. K02F2.2 ahcy-1 10962.83 2260.98 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
21. W09C5.6 rpl-31 10906.21 2249.31 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
22. Y75B12B.2 cyn-7 10355.62 2135.75 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
23. T04C12.6 act-1 10299.00 2124.08 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
24. F25H2.5 ndk-1 10187.72 2101.12 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
25. ZC434.2 rps-7 10108.64 2084.81 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
26. F39B2.6 rps-26 9924.14 2046.76 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
27. F59D8.2 vit-4 9844.09 2030.25 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
28. F52B5.6 rpl-25.2 9825.54 2026.43 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
29. D1007.6 rps-10 9529.75 1965.42 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
30. Y71A12B.1 rps-6 9428.23 1944.49 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
31. F37C12.4 rpl-36 9393.08 1937.24 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
32. K08D12.3 K08D12.3 9254.46 1908.65
33. Y69A2AR.18 Y69A2AR.18 9241.77 1906.03
34. C07H6.5 cgh-1 9208.58 1899.19 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
35. Y106G6H.2 pab-1 9201.74 1897.78 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
36. F59D8.1 vit-3 9043.60 1865.16 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
37. C42C1.14 rpl-34 8765.38 1807.78 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
38. T06E6.2 cyb-3 8651.36 1784.26 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
39. C44B12.5 perm-4 8524.65 1758.13 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
40. F40F11.1 rps-11 8460.80 1744.96 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
41. C06A1.1 cdc-48.1 8459.24 1744.64 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
42. W02A2.7 mex-5 8458.95 1744.58 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
43. T23G11.3 gld-1 8206.60 1692.54 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
44. H02I12.1 cbd-1 8171.84 1685.37 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
45. R10E11.8 vha-1 8150.66 1681.00 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
46. Y57G11C.15 sec-61 8058.60 1662.01 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
47. ZC395.10 ZC395.10 7932.67 1636.04 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
48. D2096.8 nap-1 7893.62 1627.99 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
49. Y82E9BR.3 Y82E9BR.3 7811.62 1611.08 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
50. C14B9.7 rpl-21 7740.36 1596.38 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
51. K08D12.6 K08D12.6 7651.13 1577.98
52. T07A9.14 T07A9.14 7488.50 1544.43
53. K11H12.2 rpl-15 7405.52 1527.32 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
54. C56C10.8 icd-1 7352.81 1516.45 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
55. F26D10.3 hsp-1 7211.25 1487.26 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
56. T04C12.4 act-3 7165.96 1477.91 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
57. ZC404.8 spn-4 7058.28 1455.71 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
58. F10B5.1 rpl-10 7046.28 1453.23 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
59. Y45F10D.12 rpl-18 7001.37 1443.97 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
60. Y56A3A.21 trap-4 6985.36 1440.67 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
61. F28C6.7 rpl-26 6924.25 1428.06 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
62. M01F1.2 rpl-16 6901.80 1423.43 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
63. F46F11.2 cey-2 6897.21 1422.49 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
64. F43D9.4 sip-1 6890.67 1421.14 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
65. W08E12.7 W08E12.7 6886.96 1420.37
66. B0280.5 cpg-2 6879.73 1418.88 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
67. F52E1.1 pos-1 6717.59 1385.44 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
68. B0513.3 rpl-29 6668.48 1375.31 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
69. ZC513.6 oma-2 6633.05 1368.01
70. F02A9.3 far-2 6594.29 1360.01 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
71. K02B2.5 rps-25 6442.98 1328.81 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
72. F57B9.5 byn-1 6434.29 1327.01 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
73. C34E10.6 atp-2 6371.72 1314.11 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
74. F11C3.3 unc-54 6283.86 1295.99 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
75. T04C12.5 act-2 6277.02 1294.58 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
76. B0250.1 rpl-2 6267.07 1292.53 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
77. C06B8.8 rpl-38 6240.90 1287.13 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
78. F54C9.5 rpl-5 6220.40 1282.90 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
79. T22F3.4 rpl-11.1 6198.93 1278.47 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
80. K07H8.10 K07H8.10 6197.95 1278.27
81. R09B3.3 R09B3.3 6079.83 1253.91
82. F01G4.6 F01G4.6 6070.26 1251.94 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
83. T01C3.6 rps-16 6064.21 1250.69 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
84. Y48B6A.2 rpl-43 6027.11 1243.04 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
85. F54C9.8 puf-5 6017.45 1241.04 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
86. M7.1 let-70 5941.79 1225.44 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
87. C08H9.2 vgln-1 5827.97 1201.97 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
88. F07A5.7 unc-15 5784.04 1192.90 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
89. Y111B2A.18 rsp-3 5722.93 1180.30 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
90. C16A3.9 rps-13 5707.89 1177.20 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
91. R151.3 rpl-6 5705.94 1176.80 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
92. W01D2.1 W01D2.1 5701.06 1175.79 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
93. T19H12.2 T19H12.2 5700.57 1175.69 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
94. B0393.1 rps-0 5621.99 1159.48 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
95. C42D8.2 vit-2 5618.08 1158.68 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
96. T05F1.3 rps-19 5582.94 1151.43 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
97. W06A7.3 ret-1 5558.05 1146.30 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
98. M03F4.2 act-4 5521.44 1138.75 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
99. F53G12.5 mex-3 5515.48 1137.52 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
100. Y57G11C.16 rps-18 5454.76 1124.99 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA