C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK643.5

Gene ID Gene Name Reads Transcripts Annotation
ZK643.5 ZK643.5 4029 ZK643.5

Genes with expression patterns similar to ZK643.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK643.5 ZK643.5 4029 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. B0240.4 npp-22 5510 7.421 0.962 0.969 0.956 0.969 0.889 0.915 0.899 0.862 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
3. R06F6.1 cdl-1 14167 7.406 0.933 0.967 0.983 0.967 0.869 0.920 0.895 0.872 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
4. T26A5.7 set-1 6948 7.384 0.972 0.980 0.973 0.980 0.884 0.889 0.929 0.777 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
5. F35H8.3 zfp-2 2599 7.368 0.930 0.981 0.970 0.981 0.877 0.900 0.941 0.788 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
6. Y66D12A.7 Y66D12A.7 1746 7.366 0.918 0.910 0.971 0.910 0.914 0.928 0.945 0.870 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BI40]
7. T05H4.14 gad-1 7979 7.353 0.941 0.949 0.963 0.949 0.901 0.916 0.819 0.915 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
8. C38D4.6 pal-1 7627 7.35 0.947 0.942 0.986 0.942 0.878 0.950 0.818 0.887 Homeobox protein pal-1 [Source:UniProtKB/Swiss-Prot;Acc:P34766]
9. Y42G9A.6 wht-7 2348 7.35 0.915 0.961 0.960 0.961 0.868 0.922 0.883 0.880 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
10. EEED8.1 tofu-6 3962 7.347 0.930 0.979 0.919 0.979 0.893 0.857 0.920 0.870 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
11. Y69A2AR.30 mdf-2 6403 7.342 0.959 0.964 0.972 0.964 0.917 0.909 0.902 0.755 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
12. F37A4.9 bath-41 2558 7.332 0.946 0.960 0.940 0.960 0.925 0.908 0.868 0.825 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
13. F43G9.5 cfim-1 9169 7.33 0.892 0.962 0.963 0.962 0.859 0.910 0.939 0.843 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
14. C37A2.4 cye-1 4158 7.33 0.955 0.934 0.955 0.934 0.835 0.932 0.950 0.835 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
15. K07A1.12 lin-53 15817 7.324 0.943 0.964 0.969 0.964 0.833 0.893 0.918 0.840 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
16. W03G1.6 pig-1 5015 7.321 0.943 0.971 0.961 0.971 0.906 0.879 0.853 0.837 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
17. Y37D8A.9 mrg-1 14369 7.32 0.944 0.949 0.973 0.949 0.866 0.880 0.898 0.861 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
18. C48D1.2 ced-3 4123 7.309 0.923 0.942 0.952 0.942 0.909 0.963 0.896 0.782 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
19. Y106G6H.15 ska-1 2362 7.299 0.945 0.969 0.929 0.969 0.859 0.929 0.899 0.800 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]
20. F57B9.7 flap-1 5377 7.298 0.944 0.963 0.977 0.963 0.895 0.921 0.839 0.796 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
21. Y65B4BR.8 psf-3 1866 7.297 0.943 0.966 0.944 0.966 0.816 0.918 0.866 0.878 PSF (yeast Partner of Sld Five) conserved replication factor, GINS complex [Source:RefSeq peptide;Acc:NP_490748]
22. T09A5.8 cec-3 5813 7.296 0.936 0.978 0.934 0.978 0.901 0.895 0.801 0.873 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
23. C09G4.3 cks-1 17852 7.289 0.949 0.958 0.982 0.958 0.910 0.823 0.843 0.866 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
24. F44G4.4 tdp-1 3335 7.288 0.914 0.944 0.980 0.944 0.891 0.905 0.911 0.799 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
25. F07A11.3 npp-5 2549 7.283 0.845 0.932 0.944 0.932 0.978 0.921 0.825 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496481]
26. F26B1.3 ima-2 18826 7.282 0.940 0.958 0.966 0.958 0.853 0.859 0.904 0.844 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
27. T23G5.1 rnr-1 5022 7.277 0.926 0.968 0.948 0.968 0.875 0.795 0.860 0.937 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
28. Y73B6BL.33 hrpf-2 4443 7.272 0.934 0.895 0.930 0.895 0.903 0.954 0.922 0.839 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
29. F32D1.10 mcm-7 21233 7.258 0.957 0.955 0.979 0.955 0.895 0.884 0.863 0.770 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
30. F32A5.7 lsm-4 3785 7.257 0.933 0.958 0.918 0.958 0.939 0.911 0.870 0.770 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
31. F32D1.6 neg-1 4990 7.257 0.939 0.959 0.979 0.959 0.846 0.885 0.887 0.803 Negative Effect on Gut development [Source:RefSeq peptide;Acc:NP_001256036]
32. Y41D4B.13 ced-2 10100 7.256 0.941 0.957 0.969 0.957 0.866 0.907 0.872 0.787 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
33. Y43F4B.4 npp-18 4780 7.254 0.902 0.955 0.973 0.955 0.905 0.892 0.863 0.809 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
34. C33H5.15 sgo-1 3674 7.253 0.937 0.949 0.959 0.949 0.920 0.937 0.809 0.793 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
35. M03C11.4 hat-1 3839 7.253 0.952 0.970 0.951 0.970 0.880 0.903 0.801 0.826 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
36. Y54G11A.11 Y54G11A.11 14933 7.251 0.903 0.968 0.931 0.968 0.931 0.901 0.886 0.763 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
37. C36B1.7 dhfr-1 2900 7.249 0.957 0.948 0.929 0.948 0.882 0.887 0.900 0.798 Putative dihydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q93341]
38. Y48G1A.5 xpo-2 11748 7.249 0.939 0.966 0.952 0.966 0.885 0.888 0.893 0.760 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
39. C10F3.1 cpg-4 1383 7.248 0.927 0.962 0.962 0.962 0.914 0.932 0.799 0.790 Chondroitin proteoglycan 4 [Source:UniProtKB/Swiss-Prot;Acc:O16883]
40. F53F10.5 npp-11 3378 7.247 0.883 0.955 0.941 0.955 0.889 0.926 0.889 0.809 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
41. C36B1.3 rpb-3 4442 7.245 0.895 0.957 0.915 0.957 0.883 0.914 0.863 0.861 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
42. T25G3.3 T25G3.3 7285 7.245 0.945 0.909 0.954 0.909 0.946 0.904 0.895 0.783
43. T14G10.6 tsp-12 10308 7.245 0.961 0.976 0.971 0.976 0.769 0.897 0.884 0.811 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
44. C36A4.5 maph-1.3 15493 7.244 0.947 0.914 0.983 0.914 0.837 0.898 0.926 0.825 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
45. K07A1.2 dut-1 5203 7.244 0.950 0.957 0.945 0.957 0.862 0.910 0.843 0.820 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
46. C15H11.8 rpoa-12 2257 7.243 0.938 0.904 0.967 0.904 0.808 0.932 0.916 0.874 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]
47. Y43F8C.14 ani-3 3013 7.242 0.951 0.940 0.971 0.940 0.906 0.826 0.896 0.812 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
48. K10B2.3 clec-88 12854 7.242 0.923 0.942 0.964 0.942 0.872 0.957 0.878 0.764 C-type lectin domain-containing protein 88 [Source:UniProtKB/Swiss-Prot;Acc:Q86NG3]
49. W01A8.5 tofu-5 5678 7.241 0.951 0.943 0.952 0.943 0.847 0.918 0.925 0.762 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
50. Y113G7B.5 fog-2 2753 7.239 0.934 0.943 0.953 0.943 0.920 0.898 0.879 0.769 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
51. C02B10.2 snpn-1 5519 7.239 0.919 0.937 0.980 0.937 0.880 0.864 0.878 0.844 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
52. F59B2.6 zif-1 10453 7.239 0.948 0.962 0.982 0.962 0.780 0.831 0.871 0.903 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
53. Y43E12A.1 cyb-2.1 12500 7.238 0.954 0.969 0.982 0.969 0.892 0.942 0.892 0.638 CYclin B [Source:RefSeq peptide;Acc:NP_502047]
54. ZK1010.3 frg-1 3533 7.237 0.931 0.951 0.937 0.951 0.876 0.899 0.875 0.817 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
55. T19B4.2 npp-7 13073 7.235 0.876 0.951 0.931 0.951 0.917 0.918 0.892 0.799 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
56. ZK616.4 swsn-6 2791 7.235 0.922 0.955 0.929 0.955 0.867 0.926 0.859 0.822 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]
57. Y46G5A.5 pisy-1 13040 7.233 0.881 0.970 0.980 0.970 0.899 0.905 0.856 0.772 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
58. R05D11.7 snrp-27 4159 7.233 0.953 0.961 0.969 0.961 0.866 0.885 0.827 0.811 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
59. C02B10.5 C02B10.5 9171 7.232 0.928 0.930 0.969 0.930 0.871 0.922 0.865 0.817
60. Y47D3A.26 smc-3 6256 7.229 0.857 0.918 0.928 0.918 0.853 0.959 0.928 0.868 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
61. C26E6.7 eri-9 8069 7.229 0.924 0.963 0.945 0.963 0.861 0.933 0.909 0.731 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
62. Y73F8A.34 tag-349 7966 7.228 0.928 0.950 0.952 0.950 0.951 0.893 0.794 0.810
63. T12D8.3 acbp-5 6816 7.228 0.947 0.935 0.968 0.935 0.883 0.847 0.879 0.834 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
64. ZK973.3 pdp-1 3966 7.228 0.933 0.974 0.959 0.974 0.874 0.883 0.757 0.874 Pyruvate Dehydrogenase Phosphatase homolog [Source:RefSeq peptide;Acc:NP_491357]
65. T01C3.1 cdt-2 5193 7.227 0.913 0.952 0.966 0.952 0.921 0.901 0.756 0.866 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
66. K04G7.11 K04G7.11 6153 7.225 0.924 0.948 0.972 0.948 0.828 0.899 0.950 0.756 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
67. K04G2.2 aho-3 15189 7.223 0.963 0.965 0.976 0.965 0.815 0.837 0.917 0.785
68. T07C12.14 suds-3 3352 7.222 0.936 0.954 0.928 0.954 0.854 0.955 0.902 0.739
69. K07A12.2 egg-6 18331 7.221 0.934 0.966 0.969 0.966 0.922 0.885 0.853 0.726 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
70. ZK1098.8 mut-7 4940 7.22 0.910 0.946 0.958 0.946 0.915 0.929 0.833 0.783 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
71. Y73B6BL.3 exos-2 2624 7.218 0.862 0.903 0.923 0.903 0.873 0.944 0.950 0.860 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
72. T23G7.5 pir-1 2816 7.213 0.947 0.943 0.954 0.943 0.884 0.897 0.803 0.842 Phosphatase Interacting with RNA/RNP [Source:RefSeq peptide;Acc:NP_495959]
73. F07A5.1 inx-14 2418 7.211 0.917 0.951 0.962 0.951 0.937 0.889 0.786 0.818 Innexin-14 [Source:UniProtKB/Swiss-Prot;Acc:O62136]
74. T22C1.3 T22C1.3 2305 7.21 0.905 0.966 0.935 0.966 0.882 0.956 0.808 0.792
75. Y39G10AL.3 cdk-7 3495 7.208 0.897 0.942 0.954 0.942 0.902 0.895 0.862 0.814 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
76. F11A10.2 repo-1 2791 7.208 0.905 0.920 0.955 0.920 0.867 0.942 0.876 0.823 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
77. F25B3.6 rtfo-1 11965 7.208 0.942 0.965 0.979 0.965 0.925 0.909 0.874 0.649 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
78. C18G1.5 hil-4 21692 7.206 0.925 0.968 0.947 0.968 0.900 0.841 0.807 0.850 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
79. E01B7.1 E01B7.1 2501 7.205 0.967 0.939 0.980 0.939 0.869 0.946 0.848 0.717
80. C25D7.6 mcm-3 15241 7.199 0.943 0.977 0.931 0.977 0.866 0.791 0.892 0.822 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
81. Y106G6H.8 Y106G6H.8 7319 7.199 0.936 0.976 0.968 0.976 0.897 0.886 0.836 0.724
82. Y111B2A.18 rsp-3 43731 7.199 0.907 0.953 0.923 0.953 0.897 0.796 0.887 0.883 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
83. H26D21.2 msh-2 2115 7.199 0.939 0.950 0.937 0.950 0.804 0.936 0.863 0.820 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
84. Y53C10A.12 hsf-1 7899 7.196 0.910 0.959 0.960 0.959 0.850 0.811 0.898 0.849 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
85. F57B1.2 sun-1 5721 7.195 0.923 0.956 0.959 0.956 0.879 0.818 0.879 0.825 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
86. F57C2.6 spat-1 5615 7.194 0.969 0.981 0.988 0.981 0.878 0.844 0.845 0.708 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
87. Y49E10.14 pie-1 7902 7.189 0.960 0.955 0.957 0.955 0.787 0.874 0.938 0.763 Pharynx and intestine in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94131]
88. C05C8.6 hpo-9 8263 7.188 0.899 0.945 0.963 0.945 0.900 0.929 0.840 0.767
89. W03D2.4 pcn-1 20288 7.188 0.959 0.959 0.951 0.959 0.880 0.828 0.892 0.760 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
90. T24D1.3 T24D1.3 5300 7.188 0.909 0.928 0.965 0.928 0.878 0.881 0.855 0.844
91. T20D3.7 vps-26 9349 7.187 0.889 0.955 0.951 0.955 0.885 0.917 0.892 0.743 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
92. C03C10.3 rnr-2 8430 7.186 0.921 0.947 0.960 0.947 0.899 0.827 0.855 0.830 Ribonucleoside-diphosphate reductase small chain [Source:UniProtKB/Swiss-Prot;Acc:P42170]
93. ZK353.1 cyy-1 5745 7.185 0.951 0.946 0.973 0.946 0.860 0.899 0.827 0.783 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
94. F48E8.7 skpt-1 2308 7.185 0.938 0.955 0.927 0.955 0.795 0.925 0.810 0.880 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
95. C14B1.4 wdr-5.1 4424 7.185 0.940 0.933 0.965 0.933 0.811 0.885 0.919 0.799 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
96. Y47G6A.20 rnp-6 5542 7.182 0.916 0.962 0.878 0.962 0.910 0.896 0.804 0.854 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
97. JC8.6 lin-54 5789 7.181 0.912 0.970 0.946 0.970 0.829 0.861 0.833 0.860
98. R03D7.7 nos-1 8407 7.178 0.878 0.951 0.961 0.951 0.750 0.913 0.930 0.844 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
99. K08E7.1 eak-7 18960 7.178 0.909 0.961 0.958 0.961 0.885 0.856 0.842 0.806 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
100. Y43F4B.3 set-25 8036 7.177 0.890 0.926 0.979 0.926 0.871 0.899 0.814 0.872 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]

There are 1437 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA