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Results for R12E2.3

Gene ID Gene Name Reads Transcripts Annotation
R12E2.3 rpn-8 11194 R12E2.3 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]

Genes with expression patterns similar to R12E2.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12E2.3 rpn-8 11194 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
2. F49C12.8 rpn-7 15688 7.827 0.970 0.989 0.977 0.989 0.981 0.990 0.981 0.950 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
3. F10G7.8 rpn-5 16014 7.809 0.980 0.983 0.976 0.983 0.983 0.994 0.966 0.944 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
4. F29G9.5 rpt-2 18618 7.806 0.977 0.990 0.967 0.990 0.982 0.988 0.962 0.950 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
5. F23F1.8 rpt-4 14303 7.796 0.981 0.985 0.967 0.985 0.984 0.981 0.955 0.958 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
6. C02F5.9 pbs-6 20120 7.789 0.971 0.979 0.974 0.979 0.982 0.981 0.949 0.974 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
7. C06A1.1 cdc-48.1 52743 7.788 0.977 0.989 0.972 0.989 0.983 0.987 0.934 0.957 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
8. C30C11.2 rpn-3 14437 7.774 0.962 0.976 0.975 0.976 0.987 0.990 0.951 0.957 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
9. F56H1.4 rpt-5 16849 7.772 0.988 0.986 0.967 0.986 0.979 0.989 0.959 0.918 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
10. F30A10.10 usp-48 11536 7.768 0.979 0.982 0.976 0.982 0.980 0.980 0.948 0.941 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
11. C23G10.4 rpn-2 17587 7.764 0.973 0.981 0.984 0.981 0.979 0.984 0.945 0.937 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
12. Y49E10.1 rpt-6 7806 7.756 0.971 0.978 0.965 0.978 0.987 0.973 0.965 0.939 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
13. Y40B10A.1 lbp-9 30119 7.753 0.978 0.970 0.971 0.970 0.976 0.975 0.965 0.948 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
14. C50C3.8 bath-42 18053 7.752 0.980 0.985 0.978 0.985 0.976 0.978 0.953 0.917 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
15. F20G4.3 nmy-2 27210 7.752 0.981 0.987 0.978 0.987 0.968 0.978 0.953 0.920 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
16. C34C12.3 pph-6 12139 7.743 0.970 0.975 0.950 0.975 0.978 0.993 0.955 0.947 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
17. F59E12.5 npl-4.2 5567 7.742 0.970 0.971 0.965 0.971 0.987 0.987 0.966 0.925 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
18. F49D11.9 tag-296 7973 7.741 0.970 0.980 0.953 0.980 0.978 0.979 0.933 0.968
19. C52E4.4 rpt-1 16724 7.738 0.973 0.961 0.960 0.961 0.984 0.989 0.964 0.946 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
20. T27A3.2 usp-5 11388 7.737 0.971 0.991 0.966 0.991 0.978 0.982 0.942 0.916 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
21. ZK287.5 rbx-1 13546 7.732 0.980 0.974 0.965 0.974 0.955 0.981 0.942 0.961 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
22. F16A11.3 ppfr-1 12640 7.729 0.978 0.986 0.962 0.986 0.973 0.980 0.937 0.927 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
23. T22D1.9 rpn-1 25674 7.728 0.973 0.993 0.958 0.993 0.983 0.972 0.951 0.905 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
24. B0348.6 ife-3 26859 7.72 0.967 0.990 0.965 0.990 0.964 0.964 0.943 0.937 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
25. F23C8.4 ubxn-1 25368 7.718 0.955 0.968 0.921 0.968 0.982 0.986 0.974 0.964 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
26. F44A2.1 tag-153 16535 7.712 0.976 0.985 0.974 0.985 0.952 0.934 0.950 0.956
27. C43G2.1 paqr-1 17585 7.707 0.960 0.971 0.976 0.971 0.985 0.973 0.918 0.953 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
28. T20F5.2 pbs-4 8985 7.707 0.961 0.973 0.972 0.973 0.965 0.975 0.937 0.951 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
29. Y45F10D.9 sas-6 9563 7.705 0.979 0.985 0.969 0.985 0.957 0.968 0.943 0.919 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
30. C03E10.4 gly-20 10739 7.704 0.963 0.979 0.971 0.979 0.965 0.974 0.940 0.933 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
31. B0464.5 spk-1 35112 7.704 0.981 0.972 0.968 0.972 0.974 0.947 0.948 0.942 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
32. F01G4.1 swsn-4 14710 7.704 0.959 0.982 0.968 0.982 0.972 0.957 0.935 0.949 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
33. C12D8.10 akt-1 12100 7.701 0.969 0.983 0.971 0.983 0.982 0.961 0.930 0.922 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
34. C41C4.8 cdc-48.2 7843 7.7 0.959 0.975 0.971 0.975 0.964 0.983 0.947 0.926 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
35. T16H12.5 bath-43 10021 7.7 0.957 0.983 0.958 0.983 0.969 0.989 0.935 0.926 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
36. T21E12.4 dhc-1 20370 7.699 0.980 0.978 0.963 0.978 0.958 0.960 0.939 0.943 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
37. K04G2.11 scbp-2 9123 7.698 0.965 0.966 0.966 0.966 0.986 0.982 0.935 0.932 SECIS (SeCis) Binding Protein homolog, partial [Source:RefSeq peptide;Acc:NP_492214]
38. F23F12.6 rpt-3 6433 7.698 0.975 0.975 0.952 0.975 0.986 0.975 0.955 0.905 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
39. F37A4.8 isw-1 9337 7.695 0.981 0.982 0.973 0.982 0.951 0.948 0.927 0.951 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
40. D1037.4 rab-8 14097 7.694 0.975 0.970 0.968 0.970 0.984 0.970 0.940 0.917 RAB family [Source:RefSeq peptide;Acc:NP_491199]
41. F55B12.3 sel-10 10304 7.693 0.974 0.975 0.936 0.975 0.973 0.976 0.928 0.956 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
42. Y92C3B.2 uaf-1 14981 7.69 0.982 0.980 0.952 0.980 0.966 0.972 0.929 0.929 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
43. ZK20.3 rad-23 35070 7.687 0.987 0.986 0.967 0.986 0.971 0.940 0.903 0.947
44. B0205.3 rpn-10 16966 7.686 0.973 0.986 0.958 0.986 0.961 0.968 0.948 0.906 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
45. F52E1.13 lmd-3 25047 7.684 0.967 0.987 0.966 0.987 0.976 0.950 0.922 0.929 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
46. K02B2.3 mcu-1 20448 7.681 0.982 0.978 0.974 0.978 0.985 0.973 0.932 0.879 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
47. F49E8.3 pam-1 25149 7.681 0.975 0.945 0.976 0.945 0.975 0.964 0.922 0.979
48. Y65B4BR.4 wwp-1 23206 7.681 0.980 0.980 0.971 0.980 0.983 0.966 0.925 0.896 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
49. F59E12.4 npl-4.1 3224 7.68 0.938 0.971 0.933 0.971 0.974 0.981 0.964 0.948 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495097]
50. DY3.2 lmn-1 22449 7.679 0.979 0.989 0.971 0.989 0.956 0.915 0.939 0.941 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
51. Y54G9A.6 bub-3 9123 7.679 0.976 0.980 0.972 0.980 0.956 0.967 0.909 0.939 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
52. C13B4.2 usp-14 9000 7.677 0.970 0.988 0.969 0.988 0.958 0.960 0.913 0.931 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
53. C05C10.6 ufd-3 6304 7.675 0.949 0.984 0.965 0.984 0.953 0.952 0.949 0.939 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
54. H19N07.2 math-33 10570 7.674 0.973 0.966 0.966 0.966 0.963 0.956 0.955 0.929 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
55. T06D8.8 rpn-9 11282 7.672 0.981 0.979 0.974 0.979 0.956 0.945 0.919 0.939 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
56. R01H2.6 ubc-18 13394 7.67 0.975 0.981 0.934 0.981 0.960 0.950 0.937 0.952 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
57. T12A2.8 gen-1 10490 7.669 0.945 0.978 0.963 0.978 0.976 0.982 0.939 0.908 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
58. M03D4.1 zen-4 8185 7.667 0.954 0.981 0.956 0.981 0.962 0.954 0.951 0.928 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
59. ZK858.7 ZK858.7 2817 7.665 0.955 0.980 0.956 0.980 0.976 0.981 0.899 0.938
60. R04F11.5 R04F11.5 4201 7.663 0.970 0.937 0.982 0.937 0.981 0.966 0.955 0.935
61. C03C10.1 kin-19 53180 7.663 0.954 0.941 0.962 0.941 0.978 0.966 0.971 0.950 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
62. F53C11.5 F53C11.5 7387 7.661 0.976 0.962 0.973 0.962 0.972 0.959 0.928 0.929
63. W02B12.2 rsp-2 14764 7.66 0.947 0.973 0.954 0.973 0.959 0.977 0.938 0.939 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
64. T19A5.2 gck-1 7679 7.66 0.944 0.958 0.965 0.958 0.971 0.976 0.925 0.963 Germinal center kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:H2L099]
65. ZK1248.10 tbc-2 5875 7.659 0.945 0.977 0.952 0.977 0.967 0.981 0.949 0.911 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
66. K10C8.3 istr-1 14718 7.659 0.974 0.983 0.965 0.983 0.989 0.941 0.902 0.922 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
67. F39H11.5 pbs-7 13631 7.659 0.963 0.983 0.975 0.983 0.961 0.941 0.902 0.951 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
68. Y94H6A.9 ubxn-2 7082 7.659 0.959 0.983 0.946 0.983 0.950 0.976 0.920 0.942 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
69. ZK520.4 cul-2 6732 7.658 0.960 0.964 0.958 0.964 0.983 0.981 0.961 0.887 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
70. R11D1.1 R11D1.1 2431 7.656 0.973 0.953 0.985 0.953 0.969 0.968 0.909 0.946
71. C54G10.2 rfc-1 8814 7.654 0.937 0.979 0.963 0.979 0.963 0.948 0.927 0.958 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
72. K08D12.1 pbs-1 21677 7.651 0.993 0.983 0.959 0.983 0.958 0.937 0.906 0.932 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
73. F11A10.4 mon-2 6726 7.651 0.936 0.971 0.959 0.971 0.957 0.976 0.936 0.945 Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
74. Y119D3B.15 dss-1 19116 7.65 0.951 0.972 0.950 0.972 0.965 0.960 0.938 0.942 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
75. K10B2.1 lin-23 15896 7.647 0.961 0.975 0.971 0.975 0.980 0.966 0.899 0.920 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
76. T05G5.8 vps-53 3157 7.645 0.959 0.950 0.957 0.950 0.961 0.982 0.934 0.952 Vacuolar protein sorting-associated protein 53 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34561]
77. T20G5.1 chc-1 32620 7.644 0.969 0.979 0.954 0.979 0.979 0.945 0.907 0.932 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
78. Y59A8A.3 tcc-1 20646 7.644 0.952 0.966 0.940 0.966 0.990 0.969 0.928 0.933 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
79. K08E3.6 cyk-4 8158 7.643 0.968 0.987 0.958 0.987 0.945 0.958 0.920 0.920 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
80. D1022.7 aka-1 10681 7.642 0.965 0.975 0.970 0.975 0.974 0.932 0.918 0.933 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
81. D2030.2 D2030.2 6741 7.641 0.964 0.963 0.961 0.963 0.958 0.977 0.944 0.911
82. Y71F9B.7 plk-2 6594 7.64 0.958 0.979 0.964 0.979 0.965 0.958 0.953 0.884 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
83. F09G2.8 F09G2.8 2899 7.639 0.971 0.965 0.965 0.965 0.973 0.963 0.920 0.917 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
84. F26F4.6 F26F4.6 2992 7.639 0.977 0.982 0.968 0.982 0.955 0.964 0.907 0.904
85. CD4.6 pas-6 18332 7.638 0.985 0.978 0.958 0.978 0.950 0.946 0.903 0.940 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
86. F11A10.1 lex-1 13720 7.638 0.933 0.977 0.967 0.977 0.964 0.943 0.920 0.957 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
87. F32B6.8 tbc-3 9252 7.635 0.962 0.969 0.959 0.969 0.972 0.987 0.887 0.930 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
88. C47D12.8 xpf-1 6173 7.63 0.969 0.975 0.960 0.975 0.973 0.957 0.938 0.883 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
89. F25H2.8 ubc-25 12368 7.629 0.945 0.962 0.946 0.962 0.956 0.980 0.915 0.963 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
90. C07D10.2 bath-44 6288 7.628 0.953 0.954 0.958 0.954 0.966 0.978 0.923 0.942 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_495550]
91. H06H21.6 ubxn-6 9202 7.628 0.990 0.966 0.952 0.966 0.970 0.956 0.951 0.877 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
92. C14B9.4 plk-1 18785 7.626 0.974 0.986 0.967 0.986 0.948 0.927 0.927 0.911 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
93. T09E8.1 noca-1 12494 7.624 0.967 0.986 0.947 0.986 0.975 0.977 0.896 0.890 NOn-Centrosomal microtubule Array [Source:RefSeq peptide;Acc:NP_872199]
94. F30A10.6 sac-1 4596 7.622 0.915 0.964 0.947 0.964 0.964 0.981 0.926 0.961 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
95. C02F5.1 knl-1 6637 7.621 0.979 0.981 0.969 0.981 0.965 0.951 0.889 0.906 Kinetochore null protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34278]
96. ZK353.8 ubxn-4 6411 7.618 0.964 0.951 0.952 0.951 0.956 0.980 0.917 0.947 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
97. F42G9.5 alh-11 5722 7.618 0.966 0.967 0.943 0.967 0.965 0.966 0.939 0.905 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
98. F48E8.5 paa-1 39773 7.617 0.969 0.983 0.974 0.983 0.983 0.919 0.919 0.887 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
99. K08F9.2 aipl-1 4352 7.617 0.952 0.983 0.960 0.983 0.947 0.949 0.944 0.899 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
100. F40G9.3 ubc-20 16785 7.615 0.957 0.975 0.963 0.975 0.974 0.932 0.921 0.918 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA