C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y53F4B.10

Gene ID Gene Name Reads Transcripts Annotation
Y53F4B.10 Y53F4B.10 0 Y53F4B.10

Genes with expression patterns similar to Y53F4B.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y53F4B.10 Y53F4B.10 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. F58B6.3 par-2 3914 5.754 0.929 - 0.952 - 0.953 0.984 0.981 0.955
3. Y11D7A.12 flh-1 4612 5.743 0.947 - 0.964 - 0.947 0.970 0.969 0.946 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
4. F46F11.10 F46F11.10 968 5.72 0.932 - 0.956 - 0.961 0.963 0.960 0.948
5. C29E4.2 kle-2 5527 5.72 0.950 - 0.931 - 0.968 0.974 0.931 0.966 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
6. K05C4.8 K05C4.8 0 5.718 0.960 - 0.918 - 0.947 0.991 0.987 0.915
7. Y37E11AL.4 Y37E11AL.4 54 5.716 0.928 - 0.963 - 0.943 0.964 0.945 0.973
8. Y54G11A.4 Y54G11A.4 0 5.714 0.905 - 0.952 - 0.953 0.985 0.980 0.939
9. C17E4.10 C17E4.10 7034 5.713 0.936 - 0.961 - 0.906 0.981 0.969 0.960
10. Y69H2.9 Y69H2.9 236 5.707 0.919 - 0.914 - 0.968 0.973 0.958 0.975
11. Y73F8A.34 tag-349 7966 5.702 0.956 - 0.953 - 0.927 0.986 0.957 0.923
12. T24F1.2 samp-1 8422 5.699 0.980 - 0.936 - 0.924 0.948 0.967 0.944 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
13. C48B4.12 C48B4.12 23119 5.696 0.904 - 0.946 - 0.959 0.977 0.977 0.933
14. F18E2.3 scc-3 13464 5.691 0.922 - 0.955 - 0.941 0.965 0.968 0.940 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
15. K12D12.1 top-2 18694 5.69 0.937 - 0.962 - 0.959 0.956 0.927 0.949 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
16. C32E8.6 C32E8.6 0 5.688 0.939 - 0.918 - 0.923 0.987 0.951 0.970
17. C09G4.3 cks-1 17852 5.688 0.958 - 0.967 - 0.916 0.952 0.951 0.944 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
18. Y81G3A.3 gcn-2 5831 5.688 0.915 - 0.925 - 0.938 0.987 0.959 0.964 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
19. R06C7.1 wago-1 4303 5.687 0.961 - 0.946 - 0.932 0.970 0.967 0.911 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
20. T27A10.2 T27A10.2 0 5.686 0.947 - 0.956 - 0.903 0.974 0.946 0.960
21. H31G24.4 cyb-2.2 14285 5.681 0.948 - 0.940 - 0.934 0.970 0.914 0.975 CYclin B [Source:RefSeq peptide;Acc:NP_491297]
22. T17E9.1 kin-18 8172 5.68 0.945 - 0.966 - 0.971 0.950 0.956 0.892 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
23. B0334.5 B0334.5 4713 5.679 0.940 - 0.938 - 0.947 0.936 0.948 0.970
24. Y41E3.9 fcd-2 2268 5.678 0.937 - 0.968 - 0.912 0.958 0.939 0.964 human FANCD2 (Fanconi's anemia defect) ortholog [Source:RefSeq peptide;Acc:NP_001255848]
25. R148.5 R148.5 2927 5.678 0.913 - 0.938 - 0.978 0.939 0.932 0.978
26. D2005.6 D2005.6 0 5.674 0.906 - 0.912 - 0.939 0.982 0.984 0.951
27. D2089.1 rsp-7 11057 5.674 0.941 - 0.942 - 0.945 0.967 0.954 0.925 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
28. C05C8.4 gei-6 6026 5.673 0.943 - 0.943 - 0.941 0.968 0.931 0.947 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
29. C08F8.6 C08F8.6 5128 5.673 0.955 - 0.939 - 0.953 0.958 0.940 0.928
30. Y111B2A.14 pqn-80 6445 5.671 0.917 - 0.971 - 0.915 0.949 0.967 0.952 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]
31. Y39H10A.7 chk-1 3350 5.67 0.942 - 0.939 - 0.939 0.950 0.973 0.927 Serine/threonine-protein kinase chk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Z3]
32. W01B6.9 ndc-80 4670 5.669 0.946 - 0.956 - 0.933 0.955 0.923 0.956 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
33. F53F8.6 F53F8.6 0 5.669 0.906 - 0.975 - 0.975 0.952 0.957 0.904
34. C26E6.5 fsn-1 6615 5.668 0.925 - 0.969 - 0.911 0.959 0.975 0.929 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
35. T20B12.2 tbp-1 9014 5.667 0.952 - 0.966 - 0.962 0.939 0.905 0.943 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
36. Y55D9A.1 efa-6 10012 5.667 0.953 - 0.940 - 0.948 0.928 0.968 0.930 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
37. Y53H1A.5 nfya-2 4166 5.667 0.938 - 0.946 - 0.896 0.980 0.951 0.956 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
38. Y43C5A.6 rad-51 5327 5.663 0.910 - 0.950 - 0.942 0.966 0.967 0.928 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
39. Y34D9A.4 spd-1 3396 5.663 0.946 - 0.933 - 0.960 0.962 0.952 0.910 SPD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED58]
40. M04F3.2 M04F3.2 835 5.662 0.979 - 0.946 - 0.953 0.974 0.918 0.892
41. W03F9.5 ttb-1 8682 5.662 0.942 - 0.962 - 0.944 0.937 0.928 0.949 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
42. F45E4.10 nrde-4 2741 5.661 0.902 - 0.950 - 0.959 0.950 0.945 0.955
43. W05F2.7 W05F2.7 1179 5.661 0.912 - 0.928 - 0.930 0.987 0.964 0.940
44. C16C10.2 C16C10.2 2303 5.661 0.959 - 0.968 - 0.976 0.941 0.947 0.870 Probable U3 small nucleolar RNA-associated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09462]
45. F08F8.6 F08F8.6 213 5.66 0.949 - 0.968 - 0.951 0.892 0.933 0.967
46. F35C11.6 F35C11.6 0 5.66 0.958 - 0.911 - 0.983 0.940 0.940 0.928
47. C24G6.1 syp-2 2843 5.658 0.944 - 0.945 - 0.889 0.986 0.933 0.961
48. C47D12.1 trr-1 4646 5.657 0.894 - 0.957 - 0.931 0.951 0.957 0.967 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
49. F44E2.9 F44E2.9 1289 5.657 0.922 - 0.955 - 0.902 0.971 0.968 0.939
50. C40C9.3 C40C9.3 0 5.657 0.957 - 0.906 - 0.927 0.967 0.957 0.943
51. Y4C6B.2 Y4C6B.2 182 5.656 0.919 - 0.927 - 0.957 0.932 0.953 0.968
52. K07C5.9 K07C5.9 266 5.655 0.917 - 0.949 - 0.928 0.965 0.925 0.971
53. C08C3.2 bath-15 2092 5.654 0.943 - 0.948 - 0.920 0.988 0.905 0.950 BTB and MATH domain-containing protein 15 [Source:RefSeq peptide;Acc:NP_498694]
54. Y38C1AA.2 csn-3 3451 5.653 0.934 - 0.945 - 0.954 0.953 0.915 0.952 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
55. F43E2.2 rpb-4 2812 5.652 0.939 - 0.937 - 0.936 0.973 0.930 0.937 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
56. F17A9.4 F17A9.4 3508 5.652 0.936 - 0.899 - 0.969 0.975 0.954 0.919
57. T13F2.9 T13F2.9 22593 5.651 0.905 - 0.959 - 0.929 0.953 0.963 0.942
58. K02F2.1 dpf-3 11465 5.65 0.947 - 0.955 - 0.952 0.951 0.949 0.896 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
59. Y71D11A.2 smr-1 4976 5.65 0.932 - 0.950 - 0.920 0.957 0.947 0.944 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
60. T05E11.4 spo-11 2806 5.649 0.941 - 0.957 - 0.914 0.968 0.930 0.939 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
61. Y54F10BM.3 Y54F10BM.3 1469 5.649 0.929 - 0.966 - 0.949 0.934 0.926 0.945
62. C08C3.4 cyk-7 12075 5.649 0.904 - 0.943 - 0.944 0.949 0.942 0.967 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
63. T07F8.3 gld-3 9324 5.649 0.942 - 0.963 - 0.891 0.965 0.939 0.949 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
64. C34B2.7 sdha-2 3043 5.645 0.949 - 0.907 - 0.953 0.961 0.948 0.927 Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
65. T19B10.7 ima-1 2306 5.644 0.969 - 0.923 - 0.919 0.955 0.908 0.970 Importin subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22560]
66. C14B9.4 plk-1 18785 5.643 0.974 - 0.961 - 0.940 0.931 0.893 0.944 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
67. F55A12.6 F55A12.6 1289 5.642 0.944 - 0.951 - 0.865 0.951 0.956 0.975
68. F16D3.2 rsd-6 8211 5.64 0.934 - 0.942 - 0.951 0.944 0.939 0.930
69. EEED8.7 rsp-4 13043 5.639 0.964 - 0.966 - 0.898 0.956 0.930 0.925 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
70. Y49E10.3 pph-4.2 8662 5.639 0.963 - 0.932 - 0.938 0.924 0.958 0.924 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
71. C29F5.1 C29F5.1 3405 5.638 0.895 - 0.910 - 0.968 0.972 0.932 0.961
72. T28D6.9 pen-2 2311 5.637 0.938 - 0.956 - 0.937 0.942 0.907 0.957 Gamma-secretase subunit pen-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U357]
73. F56A8.6 cpf-2 2730 5.636 0.919 - 0.929 - 0.926 0.970 0.962 0.930 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
74. F32H2.4 thoc-3 3861 5.636 0.950 - 0.952 - 0.904 0.944 0.972 0.914 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
75. C18F10.2 C18F10.2 307 5.635 0.937 - 0.944 - 0.878 0.982 0.959 0.935
76. M01F1.3 M01F1.3 8063 5.635 0.938 - 0.963 - 0.904 0.956 0.923 0.951 Lipoyl synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q21452]
77. T10C6.4 srx-44 8454 5.634 0.949 - 0.936 - 0.923 0.950 0.960 0.916 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
78. T01C3.1 cdt-2 5193 5.634 0.908 - 0.924 - 0.928 0.972 0.961 0.941 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
79. F10G7.4 scc-1 2767 5.632 0.947 - 0.963 - 0.961 0.932 0.870 0.959 Sister chromatid cohesion protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19325]
80. C16C8.5 C16C8.5 1129 5.632 0.943 - 0.901 - 0.954 0.956 0.937 0.941
81. F26H11.1 kbp-3 4177 5.631 0.952 - 0.966 - 0.957 0.947 0.853 0.956 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
82. F59E12.3 F59E12.3 138 5.63 0.908 - 0.946 - 0.927 0.954 0.945 0.950
83. C07A9.5 C07A9.5 0 5.63 0.937 - 0.917 - 0.930 0.971 0.961 0.914 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
84. C08B11.6 arp-6 4646 5.628 0.932 - 0.910 - 0.918 0.965 0.969 0.934 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
85. F01G4.3 skih-2 3353 5.628 0.901 - 0.946 - 0.955 0.962 0.943 0.921 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
86. F46A9.4 skr-2 16831 5.628 0.885 - 0.943 - 0.913 0.991 0.953 0.943 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
87. T12D8.2 drr-2 16208 5.626 0.880 - 0.922 - 0.945 0.982 0.950 0.947 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
88. F59B2.7 rab-6.1 10749 5.626 0.912 - 0.970 - 0.944 0.949 0.931 0.920 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
89. C35D10.17 C35D10.17 1806 5.625 0.924 - 0.948 - 0.935 0.963 0.946 0.909 COX assembly mitochondrial protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8MNU7]
90. Y63D3A.4 tdpt-1 2906 5.625 0.903 - 0.925 - 0.947 0.958 0.961 0.931 5'-tyrosyl-DNA phosphodiesterase [Source:UniProtKB/Swiss-Prot;Acc:Q9XWG3]
91. F35G12.8 smc-4 6202 5.624 0.901 - 0.913 - 0.939 0.972 0.954 0.945 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
92. T06D8.6 cchl-1 26292 5.624 0.920 - 0.938 - 0.949 0.948 0.954 0.915 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
93. C09G9.6 oma-1 18743 5.622 0.966 - 0.942 - 0.927 0.930 0.948 0.909
94. F58G11.4 F58G11.4 0 5.622 0.943 - 0.949 - 0.960 0.979 0.902 0.889
95. C18G1.4 pgl-3 5291 5.622 0.953 - 0.910 - 0.940 0.969 0.967 0.883 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
96. ZK328.5 npp-10 7652 5.621 0.933 - 0.935 - 0.940 0.955 0.924 0.934 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
97. F26A1.3 F26A1.3 601 5.621 0.937 - 0.948 - 0.909 0.942 0.960 0.925
98. T19H12.3 T19H12.3 3850 5.62 0.957 - 0.958 - 0.861 0.949 0.939 0.956
99. B0547.1 csn-5 3568 5.62 0.919 - 0.940 - 0.959 0.968 0.938 0.896 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
100. Y105E8A.17 ekl-4 4732 5.62 0.941 - 0.940 - 0.927 0.963 0.916 0.933

There are 1318 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA