C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T27E9.3

Gene ID Gene Name Reads Transcripts Annotation
T27E9.3 cdk-5 6877 T27E9.3 Cyclin-dependent-like kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:G5ECH7]

Genes with expression patterns similar to T27E9.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T27E9.3 cdk-5 6877 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cyclin-dependent-like kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:G5ECH7]
2. R01H2.6 ubc-18 13394 7.643 0.961 0.975 0.969 0.975 0.957 0.977 0.918 0.911 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
3. C54G10.2 rfc-1 8814 7.606 0.941 0.959 0.965 0.959 0.971 0.969 0.920 0.922 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
4. C02F5.9 pbs-6 20120 7.603 0.932 0.970 0.946 0.970 0.975 0.963 0.914 0.933 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
5. C47D12.8 xpf-1 6173 7.593 0.941 0.961 0.962 0.961 0.968 0.953 0.907 0.940 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
6. F16D3.2 rsd-6 8211 7.593 0.957 0.961 0.968 0.961 0.962 0.967 0.896 0.921
7. C30C11.2 rpn-3 14437 7.589 0.955 0.936 0.972 0.936 0.980 0.966 0.913 0.931 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
8. F49E8.3 pam-1 25149 7.587 0.970 0.942 0.964 0.942 0.974 0.976 0.893 0.926
9. K10B2.1 lin-23 15896 7.585 0.968 0.943 0.966 0.943 0.981 0.979 0.903 0.902 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
10. F55B12.3 sel-10 10304 7.578 0.958 0.968 0.960 0.968 0.967 0.960 0.880 0.917 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
11. F12F6.3 rib-1 10524 7.574 0.948 0.965 0.967 0.965 0.946 0.975 0.891 0.917 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
12. CD4.6 pas-6 18332 7.569 0.969 0.976 0.941 0.976 0.946 0.972 0.887 0.902 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
13. D1022.7 aka-1 10681 7.564 0.967 0.958 0.958 0.958 0.971 0.953 0.913 0.886 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
14. Y76A2B.1 pod-1 12528 7.564 0.956 0.948 0.955 0.948 0.975 0.969 0.901 0.912 POD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDS2]
15. C02F4.1 ced-5 9096 7.562 0.937 0.967 0.974 0.967 0.958 0.977 0.890 0.892 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
16. F37A4.8 isw-1 9337 7.558 0.953 0.965 0.950 0.965 0.954 0.964 0.911 0.896 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
17. T10F2.3 ulp-1 8351 7.555 0.966 0.943 0.968 0.943 0.956 0.962 0.888 0.929 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
18. R12E2.3 rpn-8 11194 7.55 0.949 0.961 0.942 0.961 0.983 0.956 0.895 0.903 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
19. F30A10.10 usp-48 11536 7.549 0.973 0.950 0.957 0.950 0.965 0.958 0.913 0.883 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
20. F12F6.5 srgp-1 9048 7.546 0.915 0.969 0.969 0.969 0.959 0.983 0.896 0.886 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
21. C12D8.10 akt-1 12100 7.546 0.972 0.939 0.966 0.939 0.981 0.979 0.890 0.880 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
22. T23B12.4 natc-1 7759 7.545 0.947 0.945 0.951 0.945 0.949 0.974 0.911 0.923 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
23. C17D12.1 dhhc-7 6002 7.541 0.966 0.952 0.954 0.952 0.961 0.928 0.927 0.901 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
24. F32B6.8 tbc-3 9252 7.54 0.957 0.964 0.955 0.964 0.951 0.956 0.873 0.920 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
25. F25H2.8 ubc-25 12368 7.54 0.959 0.951 0.955 0.951 0.950 0.949 0.892 0.933 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
26. F23C8.4 ubxn-1 25368 7.535 0.974 0.938 0.961 0.938 0.978 0.945 0.886 0.915 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
27. Y106G6E.6 csnk-1 11517 7.534 0.976 0.965 0.944 0.965 0.974 0.932 0.903 0.875 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
28. K08D12.1 pbs-1 21677 7.534 0.951 0.973 0.969 0.973 0.942 0.943 0.882 0.901 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
29. F44A2.1 tag-153 16535 7.532 0.954 0.954 0.929 0.954 0.948 0.950 0.919 0.924
30. ZK1248.10 tbc-2 5875 7.531 0.949 0.967 0.956 0.967 0.962 0.961 0.866 0.903 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
31. ZK287.5 rbx-1 13546 7.53 0.955 0.960 0.964 0.960 0.947 0.979 0.887 0.878 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
32. C05C10.6 ufd-3 6304 7.529 0.939 0.947 0.956 0.947 0.969 0.969 0.915 0.887 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
33. C04A2.7 dnj-5 9618 7.528 0.940 0.954 0.939 0.954 0.953 0.959 0.906 0.923 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
34. ZC404.9 gck-2 8382 7.526 0.947 0.960 0.951 0.960 0.951 0.968 0.882 0.907 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
35. C03E10.4 gly-20 10739 7.525 0.970 0.975 0.941 0.975 0.964 0.961 0.899 0.840 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
36. Y32F6A.3 pap-1 11972 7.523 0.958 0.969 0.956 0.969 0.969 0.961 0.884 0.857 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
37. F01G4.1 swsn-4 14710 7.523 0.964 0.938 0.966 0.938 0.982 0.961 0.902 0.872 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
38. T17E9.1 kin-18 8172 7.523 0.942 0.966 0.967 0.966 0.923 0.942 0.906 0.911 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
39. W03F9.5 ttb-1 8682 7.52 0.961 0.969 0.969 0.969 0.926 0.967 0.854 0.905 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
40. F23F1.8 rpt-4 14303 7.52 0.946 0.956 0.947 0.956 0.965 0.961 0.893 0.896 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
41. T07E3.5 brc-2 3212 7.518 0.957 0.945 0.941 0.945 0.955 0.954 0.898 0.923 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
42. C03B8.4 lin-13 7489 7.517 0.934 0.932 0.959 0.932 0.956 0.977 0.906 0.921 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
43. B0464.5 spk-1 35112 7.516 0.945 0.955 0.946 0.955 0.975 0.953 0.901 0.886 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
44. T12E12.1 T12E12.1 7629 7.514 0.957 0.955 0.975 0.955 0.940 0.930 0.910 0.892 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
45. F58G11.1 letm-1 13414 7.514 0.955 0.963 0.943 0.963 0.966 0.946 0.903 0.875 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
46. F49D11.9 tag-296 7973 7.513 0.966 0.965 0.968 0.965 0.966 0.958 0.865 0.860
47. F18E2.3 scc-3 13464 7.513 0.961 0.957 0.962 0.957 0.951 0.924 0.892 0.909 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
48. Y17G7B.2 ash-2 5452 7.513 0.922 0.959 0.948 0.959 0.956 0.982 0.898 0.889 ASH histone methyltransferase complex subunit (Drosophila absent, small or homeotic discs) [Source:RefSeq peptide;Acc:NP_496555]
49. ZC262.3 iglr-2 6268 7.511 0.962 0.965 0.961 0.965 0.951 0.950 0.911 0.846 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
50. C13B4.2 usp-14 9000 7.51 0.985 0.946 0.963 0.946 0.952 0.975 0.864 0.879 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
51. Y110A7A.17 mat-1 3797 7.509 0.965 0.929 0.945 0.929 0.961 0.950 0.918 0.912 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
52. Y40B10A.1 lbp-9 30119 7.509 0.925 0.953 0.938 0.953 0.979 0.978 0.900 0.883 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
53. DY3.2 lmn-1 22449 7.509 0.941 0.970 0.939 0.970 0.959 0.974 0.866 0.890 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
54. K10B2.5 ani-2 11397 7.509 0.971 0.947 0.979 0.947 0.956 0.959 0.868 0.882 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
55. Y55D9A.1 efa-6 10012 7.507 0.951 0.941 0.965 0.941 0.944 0.951 0.875 0.939 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
56. F59B2.7 rab-6.1 10749 7.506 0.943 0.977 0.946 0.977 0.953 0.919 0.883 0.908 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
57. D1007.7 nrd-1 6738 7.506 0.936 0.970 0.980 0.970 0.935 0.969 0.861 0.885 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
58. T21E12.4 dhc-1 20370 7.505 0.956 0.942 0.951 0.942 0.953 0.970 0.896 0.895 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
59. F41E6.4 smk-1 22394 7.505 0.920 0.953 0.946 0.953 0.967 0.954 0.904 0.908 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
60. F14D2.12 bath-30 1909 7.505 0.965 0.934 0.969 0.934 0.938 0.956 0.869 0.940 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_494512]
61. H06H21.6 ubxn-6 9202 7.503 0.962 0.958 0.947 0.958 0.965 0.956 0.868 0.889 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
62. T20F5.2 pbs-4 8985 7.503 0.948 0.978 0.963 0.978 0.966 0.945 0.850 0.875 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
63. T24C4.6 zer-1 16051 7.502 0.950 0.967 0.964 0.967 0.968 0.942 0.888 0.856 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
64. T10H9.3 syx-18 2416 7.501 0.958 0.956 0.938 0.956 0.961 0.964 0.845 0.923 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
65. F26E4.1 sur-6 16191 7.5 0.945 0.972 0.929 0.972 0.959 0.929 0.871 0.923 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
66. F20G4.3 nmy-2 27210 7.499 0.960 0.969 0.965 0.969 0.959 0.921 0.879 0.877 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
67. M01E5.5 top-1 25458 7.499 0.881 0.971 0.951 0.971 0.965 0.960 0.902 0.898 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
68. F11A10.1 lex-1 13720 7.496 0.949 0.935 0.964 0.935 0.962 0.959 0.900 0.892 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
69. F42G9.5 alh-11 5722 7.496 0.973 0.947 0.947 0.947 0.942 0.961 0.920 0.859 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
70. C50C3.8 bath-42 18053 7.495 0.963 0.970 0.952 0.970 0.970 0.958 0.825 0.887 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
71. K07C5.8 cash-1 10523 7.494 0.969 0.939 0.941 0.939 0.953 0.935 0.909 0.909 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
72. R04F11.5 R04F11.5 4201 7.494 0.953 0.947 0.953 0.947 0.973 0.958 0.877 0.886
73. ZK520.4 cul-2 6732 7.494 0.974 0.935 0.961 0.935 0.975 0.973 0.907 0.834 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
74. F39H11.5 pbs-7 13631 7.493 0.935 0.957 0.954 0.957 0.966 0.947 0.848 0.929 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
75. Y71F9AL.18 parp-1 3736 7.493 0.924 0.947 0.935 0.947 0.970 0.946 0.893 0.931 Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
76. F38A5.13 dnj-11 19678 7.49 0.885 0.958 0.948 0.958 0.947 0.963 0.902 0.929 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
77. F26E4.8 tba-1 26935 7.49 0.936 0.954 0.970 0.954 0.960 0.915 0.901 0.900 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_001251213]
78. EEED8.7 rsp-4 13043 7.49 0.962 0.972 0.961 0.972 0.929 0.955 0.850 0.889 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
79. F23B2.6 aly-2 7301 7.49 0.955 0.956 0.955 0.956 0.920 0.951 0.883 0.914 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
80. F52C9.8 pqe-1 7546 7.489 0.923 0.969 0.973 0.969 0.929 0.957 0.879 0.890 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
81. T20G5.1 chc-1 32620 7.488 0.971 0.956 0.960 0.956 0.976 0.924 0.850 0.895 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
82. F40F12.5 cyld-1 10757 7.485 0.982 0.949 0.975 0.949 0.971 0.919 0.839 0.901 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
83. W02B12.2 rsp-2 14764 7.484 0.936 0.971 0.934 0.971 0.957 0.952 0.837 0.926 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
84. F35B12.5 sas-5 4606 7.484 0.961 0.923 0.968 0.923 0.943 0.948 0.909 0.909 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
85. D1037.4 rab-8 14097 7.483 0.957 0.969 0.971 0.969 0.982 0.910 0.854 0.871 RAB family [Source:RefSeq peptide;Acc:NP_491199]
86. Y48B6A.14 hmg-1.1 88723 7.483 0.933 0.963 0.943 0.963 0.952 0.949 0.882 0.898 HMG [Source:RefSeq peptide;Acc:NP_496970]
87. T27A3.2 usp-5 11388 7.483 0.962 0.950 0.957 0.950 0.967 0.946 0.882 0.869 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
88. M03D4.1 zen-4 8185 7.482 0.957 0.964 0.951 0.964 0.966 0.944 0.842 0.894 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
89. M106.1 mix-1 7950 7.481 0.900 0.957 0.964 0.957 0.946 0.941 0.890 0.926 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
90. Y45F10D.9 sas-6 9563 7.48 0.969 0.976 0.955 0.976 0.959 0.953 0.849 0.843 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
91. T16H12.5 bath-43 10021 7.478 0.973 0.954 0.952 0.954 0.962 0.960 0.834 0.889 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
92. W09D10.2 tat-3 11820 7.478 0.964 0.930 0.973 0.930 0.949 0.950 0.908 0.874 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
93. C07A9.3 tlk-1 12572 7.477 0.966 0.951 0.974 0.951 0.948 0.970 0.860 0.857 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
94. ZK20.3 rad-23 35070 7.477 0.957 0.946 0.947 0.946 0.952 0.948 0.865 0.916
95. C07G1.4 wsp-1 11226 7.477 0.942 0.939 0.967 0.939 0.932 0.938 0.908 0.912 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
96. C13F10.6 C13F10.6 1811 7.474 0.908 0.955 0.983 0.955 0.960 0.959 0.830 0.924
97. B0348.6 ife-3 26859 7.474 0.937 0.946 0.946 0.946 0.962 0.964 0.860 0.913 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
98. Y92C3B.2 uaf-1 14981 7.474 0.959 0.944 0.927 0.944 0.970 0.969 0.856 0.905 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
99. ZC308.1 gld-2 9622 7.472 0.973 0.931 0.945 0.931 0.955 0.962 0.881 0.894 Poly(A) RNA polymerase gld-2 [Source:UniProtKB/Swiss-Prot;Acc:O17087]
100. C25A1.5 C25A1.5 9135 7.471 0.942 0.963 0.939 0.963 0.943 0.941 0.887 0.893

There are 2136 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA