C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F23C8.4

Gene ID Gene Name Reads Transcripts Annotation
F23C8.4 ubxn-1 25368 F23C8.4 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]

Genes with expression patterns similar to F23C8.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F23C8.4 ubxn-1 25368 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
2. Y45F10D.9 sas-6 9563 7.763 0.975 0.983 0.960 0.983 0.971 0.977 0.949 0.965 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
3. C12D8.10 akt-1 12100 7.757 0.972 0.979 0.977 0.979 0.982 0.956 0.948 0.964 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
4. ZK632.7 panl-3 5387 7.754 0.978 0.981 0.971 0.981 0.969 0.986 0.929 0.959 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
5. C06A1.1 cdc-48.1 52743 7.747 0.969 0.981 0.958 0.981 0.968 0.973 0.948 0.969 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
6. M03D4.1 zen-4 8185 7.735 0.950 0.971 0.976 0.971 0.972 0.966 0.959 0.970 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
7. Y110A2AR.3 Y110A2AR.3 7003 7.733 0.991 0.950 0.981 0.950 0.970 0.967 0.966 0.958
8. F23F1.8 rpt-4 14303 7.724 0.956 0.968 0.939 0.968 0.977 0.978 0.972 0.966 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
9. R12E2.3 rpn-8 11194 7.718 0.955 0.968 0.921 0.968 0.982 0.986 0.974 0.964 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
10. F49D11.9 tag-296 7973 7.718 0.973 0.983 0.963 0.983 0.955 0.956 0.950 0.955
11. R01H2.6 ubc-18 13394 7.711 0.970 0.974 0.972 0.974 0.957 0.961 0.942 0.961 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
12. F56H1.4 rpt-5 16849 7.705 0.972 0.962 0.935 0.962 0.977 0.972 0.972 0.953 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
13. F49C12.8 rpn-7 15688 7.703 0.955 0.962 0.949 0.962 0.973 0.975 0.971 0.956 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
14. Y49E10.1 rpt-6 7806 7.7 0.979 0.967 0.958 0.967 0.977 0.940 0.965 0.947 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
15. T12A2.8 gen-1 10490 7.699 0.964 0.963 0.969 0.963 0.970 0.972 0.971 0.927 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
16. F10G7.8 rpn-5 16014 7.699 0.952 0.964 0.946 0.964 0.976 0.983 0.961 0.953 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
17. F30A10.10 usp-48 11536 7.699 0.964 0.960 0.936 0.960 0.971 0.993 0.957 0.958 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
18. F11A10.1 lex-1 13720 7.697 0.936 0.987 0.975 0.987 0.960 0.961 0.920 0.971 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
19. F29G9.5 rpt-2 18618 7.692 0.962 0.969 0.934 0.969 0.967 0.971 0.964 0.956 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
20. Y59A8A.3 tcc-1 20646 7.688 0.973 0.972 0.986 0.972 0.978 0.963 0.938 0.906 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
21. T19B10.6 dvc-1 3498 7.688 0.971 0.970 0.984 0.970 0.965 0.962 0.906 0.960 SprT-like domain-containing protein Spartan [Source:UniProtKB/Swiss-Prot;Acc:Q22557]
22. F23F12.6 rpt-3 6433 7.687 0.952 0.972 0.956 0.972 0.975 0.959 0.963 0.938 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
23. ZK287.5 rbx-1 13546 7.687 0.960 0.971 0.969 0.971 0.947 0.980 0.935 0.954 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
24. ZK1248.10 tbc-2 5875 7.687 0.940 0.969 0.975 0.969 0.964 0.986 0.940 0.944 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
25. F25H2.8 ubc-25 12368 7.686 0.971 0.956 0.970 0.956 0.948 0.985 0.930 0.970 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
26. F59E12.5 npl-4.2 5567 7.686 0.972 0.962 0.970 0.962 0.958 0.977 0.943 0.942 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
27. T22D1.9 rpn-1 25674 7.679 0.976 0.978 0.957 0.978 0.962 0.946 0.951 0.931 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
28. F55B12.3 sel-10 10304 7.679 0.971 0.956 0.951 0.956 0.966 0.981 0.922 0.976 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
29. ZK520.4 cul-2 6732 7.678 0.971 0.972 0.945 0.972 0.978 0.973 0.948 0.919 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
30. Y43F4B.6 klp-19 13220 7.677 0.957 0.977 0.984 0.977 0.926 0.957 0.943 0.956 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
31. F01G4.1 swsn-4 14710 7.675 0.963 0.979 0.979 0.979 0.965 0.946 0.929 0.935 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
32. K10B2.5 ani-2 11397 7.675 0.961 0.979 0.977 0.979 0.949 0.945 0.930 0.955 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
33. C50C3.8 bath-42 18053 7.674 0.979 0.969 0.950 0.969 0.959 0.972 0.946 0.930 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
34. F44F4.2 egg-3 5572 7.673 0.952 0.988 0.988 0.988 0.944 0.937 0.958 0.918 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_496341]
35. T12E12.1 T12E12.1 7629 7.672 0.974 0.982 0.960 0.982 0.949 0.949 0.938 0.938 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
36. F20G4.3 nmy-2 27210 7.667 0.966 0.963 0.940 0.963 0.975 0.967 0.944 0.949 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
37. C02F5.9 pbs-6 20120 7.666 0.953 0.953 0.925 0.953 0.976 0.983 0.955 0.968 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
38. C14B9.4 plk-1 18785 7.665 0.971 0.980 0.972 0.980 0.934 0.953 0.945 0.930 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
39. C05C10.6 ufd-3 6304 7.661 0.927 0.979 0.957 0.979 0.947 0.943 0.951 0.978 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
40. Y50E8A.4 unc-61 8599 7.659 0.959 0.989 0.974 0.989 0.938 0.924 0.927 0.959
41. C03E10.4 gly-20 10739 7.656 0.967 0.968 0.945 0.968 0.950 0.975 0.958 0.925 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
42. Y94H6A.9 ubxn-2 7082 7.653 0.944 0.974 0.948 0.974 0.934 0.984 0.942 0.953 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
43. C30C11.2 rpn-3 14437 7.651 0.964 0.955 0.955 0.955 0.964 0.974 0.943 0.941 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
44. F59E12.4 npl-4.1 3224 7.646 0.951 0.949 0.939 0.949 0.965 0.980 0.952 0.961 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495097]
45. K10B2.1 lin-23 15896 7.643 0.970 0.968 0.972 0.968 0.983 0.969 0.911 0.902 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
46. C13B4.2 usp-14 9000 7.642 0.975 0.970 0.975 0.970 0.939 0.955 0.910 0.948 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
47. T16H12.5 bath-43 10021 7.64 0.979 0.967 0.962 0.967 0.960 0.975 0.904 0.926 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
48. B0348.6 ife-3 26859 7.638 0.958 0.966 0.926 0.966 0.952 0.979 0.946 0.945 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
49. C23G10.4 rpn-2 17587 7.638 0.958 0.940 0.960 0.940 0.979 0.978 0.928 0.955 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
50. T27A3.2 usp-5 11388 7.636 0.965 0.968 0.943 0.968 0.948 0.974 0.940 0.930 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
51. T07E3.5 brc-2 3212 7.634 0.954 0.978 0.934 0.978 0.953 0.967 0.938 0.932 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
52. ZC404.3 spe-39 7397 7.629 0.954 0.974 0.983 0.974 0.924 0.951 0.908 0.961 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
53. Y53C12A.1 wee-1.3 16766 7.628 0.972 0.973 0.973 0.973 0.954 0.945 0.931 0.907 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 [Source:UniProtKB/Swiss-Prot;Acc:O18209]
54. D1037.4 rab-8 14097 7.628 0.977 0.954 0.954 0.954 0.981 0.956 0.918 0.934 RAB family [Source:RefSeq peptide;Acc:NP_491199]
55. B0205.3 rpn-10 16966 7.628 0.964 0.971 0.939 0.971 0.953 0.942 0.952 0.936 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
56. F59A3.4 F59A3.4 11625 7.619 0.941 0.980 0.933 0.980 0.971 0.976 0.919 0.919
57. K07C11.2 air-1 13838 7.618 0.963 0.974 0.968 0.974 0.969 0.968 0.911 0.891 Aurora/Ipl1 Related kinase [Source:RefSeq peptide;Acc:NP_505119]
58. ZK858.7 ZK858.7 2817 7.618 0.985 0.951 0.940 0.951 0.955 0.966 0.925 0.945
59. C52E4.4 rpt-1 16724 7.614 0.933 0.934 0.925 0.934 0.978 0.987 0.951 0.972 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
60. D1022.7 aka-1 10681 7.613 0.966 0.963 0.969 0.963 0.956 0.942 0.921 0.933 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
61. F35B12.5 sas-5 4606 7.613 0.959 0.982 0.975 0.982 0.930 0.942 0.888 0.955 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
62. F37A4.8 isw-1 9337 7.611 0.951 0.962 0.937 0.962 0.943 0.967 0.931 0.958 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
63. W09D10.2 tat-3 11820 7.609 0.953 0.964 0.958 0.964 0.951 0.963 0.924 0.932 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
64. F26H11.1 kbp-3 4177 7.609 0.963 0.967 0.951 0.967 0.945 0.944 0.929 0.943 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
65. C09G9.6 oma-1 18743 7.606 0.959 0.976 0.995 0.976 0.917 0.922 0.903 0.958
66. K08E3.6 cyk-4 8158 7.604 0.963 0.972 0.930 0.972 0.931 0.961 0.933 0.942 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
67. F18A1.5 rpa-1 3109 7.604 0.936 0.972 0.953 0.972 0.938 0.957 0.923 0.953 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
68. T20F5.2 pbs-4 8985 7.603 0.959 0.938 0.953 0.938 0.947 0.976 0.946 0.946 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
69. C17D12.1 dhhc-7 6002 7.601 0.958 0.949 0.955 0.949 0.965 0.941 0.917 0.967 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
70. T09B4.2 T09B4.2 2820 7.598 0.977 0.954 0.968 0.954 0.940 0.966 0.902 0.937
71. C47D12.8 xpf-1 6173 7.598 0.936 0.966 0.954 0.966 0.963 0.982 0.917 0.914 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
72. K08F9.2 aipl-1 4352 7.598 0.936 0.949 0.946 0.949 0.951 0.978 0.930 0.959 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
73. C04A2.7 dnj-5 9618 7.596 0.935 0.969 0.966 0.969 0.949 0.978 0.921 0.909 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
74. C07D10.2 bath-44 6288 7.595 0.972 0.963 0.961 0.963 0.958 0.982 0.877 0.919 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_495550]
75. M04F3.1 rpa-2 4944 7.595 0.958 0.964 0.950 0.964 0.948 0.955 0.930 0.926 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
76. Y105E8B.4 bath-40 6638 7.595 0.950 0.954 0.952 0.954 0.964 0.968 0.942 0.911 BTB and MATH domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9NF14]
77. D2030.2 D2030.2 6741 7.595 0.942 0.940 0.947 0.940 0.934 0.981 0.963 0.948
78. Y71F9B.7 plk-2 6594 7.588 0.959 0.953 0.951 0.953 0.949 0.953 0.958 0.912 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
79. W02B12.2 rsp-2 14764 7.586 0.964 0.943 0.917 0.943 0.947 0.974 0.945 0.953 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
80. F32B6.8 tbc-3 9252 7.586 0.954 0.959 0.945 0.959 0.950 0.966 0.912 0.941 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
81. Y110A7A.17 mat-1 3797 7.586 0.954 0.969 0.929 0.969 0.945 0.967 0.936 0.917 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
82. Y71F9AL.18 parp-1 3736 7.585 0.926 0.953 0.931 0.953 0.976 0.956 0.924 0.966 Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
83. F42G9.5 alh-11 5722 7.584 0.957 0.969 0.959 0.969 0.930 0.952 0.954 0.894 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
84. C54G10.2 rfc-1 8814 7.582 0.920 0.946 0.960 0.946 0.961 0.947 0.932 0.970 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
85. C43G2.1 paqr-1 17585 7.581 0.965 0.956 0.935 0.956 0.973 0.967 0.890 0.939 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
86. Y46G5A.12 vps-2 5685 7.578 0.983 0.967 0.961 0.967 0.940 0.966 0.889 0.905 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
87. K11D9.1 klp-7 14582 7.578 0.951 0.948 0.955 0.948 0.932 0.969 0.918 0.957 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001022677]
88. T05A6.2 cki-2 13153 7.578 0.969 0.964 0.956 0.964 0.960 0.947 0.931 0.887 CKI family (Cyclin-dependent Kinase Inhibitor) [Source:RefSeq peptide;Acc:NP_001022309]
89. D1007.16 eaf-1 4081 7.578 0.975 0.953 0.975 0.953 0.936 0.977 0.938 0.871 ELL Associated Factor homolog [Source:RefSeq peptide;Acc:NP_491404]
90. T06D8.8 rpn-9 11282 7.578 0.973 0.962 0.959 0.962 0.935 0.951 0.897 0.939 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
91. F26E4.8 tba-1 26935 7.578 0.952 0.952 0.962 0.952 0.972 0.966 0.886 0.936 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_001251213]
92. C41C4.8 cdc-48.2 7843 7.578 0.959 0.945 0.929 0.945 0.938 0.966 0.963 0.933 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
93. ZK353.8 ubxn-4 6411 7.577 0.973 0.941 0.951 0.941 0.937 0.960 0.930 0.944 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
94. R04F11.5 R04F11.5 4201 7.577 0.952 0.911 0.941 0.911 0.976 0.970 0.946 0.970
95. F16A11.3 ppfr-1 12640 7.576 0.967 0.958 0.920 0.958 0.948 0.965 0.955 0.905 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
96. K09H11.3 rga-3 6319 7.573 0.968 0.972 0.950 0.972 0.931 0.935 0.920 0.925 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
97. ZK20.3 rad-23 35070 7.571 0.966 0.965 0.923 0.965 0.954 0.951 0.895 0.952
98. H06H21.6 ubxn-6 9202 7.57 0.958 0.950 0.940 0.950 0.958 0.967 0.931 0.916 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
99. F20D12.4 czw-1 2729 7.57 0.967 0.952 0.924 0.952 0.965 0.960 0.935 0.915 Caenorhabditis Zeste White 10 (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_501327]
100. Y54G9A.6 bub-3 9123 7.568 0.934 0.956 0.945 0.956 0.960 0.984 0.891 0.942 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]

There are 1929 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA