C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for R05D11.4

Gene ID Gene Name Reads Transcripts Annotation
R05D11.4 R05D11.4 2590 R05D11.4

Genes with expression patterns similar to R05D11.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R05D11.4 R05D11.4 2590 2 - 1.000 - 1.000 - - - -
2. E01A2.4 let-504 9788 1.972 - 0.986 - 0.986 - - - -
3. Y53C12B.3 nos-3 20231 1.972 - 0.986 - 0.986 - - - - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
4. F36F2.3 rbpl-1 15376 1.97 - 0.985 - 0.985 - - - - Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
5. Y17G7A.1 hmg-12 29989 1.97 - 0.985 - 0.985 - - - - HMG [Source:RefSeq peptide;Acc:NP_496544]
6. C38D4.4 C38D4.4 3791 1.97 - 0.985 - 0.985 - - - -
7. ZK1236.6 pqn-96 3989 1.968 - 0.984 - 0.984 - - - - Prion-like-(Q/N-rich) domain-bearing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:P34622]
8. F42A9.6 F42A9.6 5573 1.968 - 0.984 - 0.984 - - - -
9. F22D6.3 nars-1 18624 1.966 - 0.983 - 0.983 - - - - Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
10. T28D9.10 snr-3 9995 1.966 - 0.983 - 0.983 - - - - Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
11. ZK381.4 pgl-1 20651 1.966 - 0.983 - 0.983 - - - - P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
12. F22G12.5 F22G12.5 5456 1.964 - 0.982 - 0.982 - - - -
13. W06E11.4 sbds-1 6701 1.964 - 0.982 - 0.982 - - - - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
14. ZK973.1 ZK973.1 4334 1.964 - 0.982 - 0.982 - - - -
15. Y110A2AR.2 ubc-15 15884 1.964 - 0.982 - 0.982 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_494397]
16. C26E6.4 rpb-2 7053 1.964 - 0.982 - 0.982 - - - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
17. R74.8 R74.8 7722 1.962 - 0.981 - 0.981 - - - -
18. Y41D4B.19 npp-8 12992 1.962 - 0.981 - 0.981 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
19. R186.7 R186.7 4815 1.962 - 0.981 - 0.981 - - - -
20. D1081.8 cdc-5L 8553 1.962 - 0.981 - 0.981 - - - - Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
21. Y37E11AL.3 Y37E11AL.3 5448 1.962 - 0.981 - 0.981 - - - -
22. T05B9.1 T05B9.1 23308 1.962 - 0.981 - 0.981 - - - -
23. T23B3.1 T23B3.1 12084 1.962 - 0.981 - 0.981 - - - -
24. C17H12.13 anat-1 12995 1.962 - 0.981 - 0.981 - - - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
25. W05F2.6 W05F2.6 7609 1.962 - 0.981 - 0.981 - - - -
26. R07E5.14 rnp-4 11659 1.962 - 0.981 - 0.981 - - - - RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
27. Y40B10A.1 lbp-9 30119 1.962 - 0.981 - 0.981 - - - - Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
28. ZK546.14 ZK546.14 9848 1.96 - 0.980 - 0.980 - - - -
29. B0035.6 B0035.6 7327 1.96 - 0.980 - 0.980 - - - -
30. K05C4.5 K05C4.5 3271 1.96 - 0.980 - 0.980 - - - -
31. Y65B4A.1 Y65B4A.1 3597 1.96 - 0.980 - 0.980 - - - -
32. C48E7.3 lpd-2 10330 1.96 - 0.980 - 0.980 - - - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
33. F55A3.3 F55A3.3 15671 1.96 - 0.980 - 0.980 - - - - FACT complex subunit spt-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5R9]
34. C43E11.1 acin-1 7781 1.96 - 0.980 - 0.980 - - - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
35. C54G10.2 rfc-1 8814 1.96 - 0.980 - 0.980 - - - - RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
36. F19F10.9 F19F10.9 5319 1.958 - 0.979 - 0.979 - - - -
37. F54D5.14 smc-6 10569 1.958 - 0.979 - 0.979 - - - - SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_496476]
38. B0041.7 xnp-1 9187 1.958 - 0.979 - 0.979 - - - - Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
39. F29B9.4 psr-1 4355 1.958 - 0.979 - 0.979 - - - - Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI4]
40. C27B7.1 spr-2 14958 1.958 - 0.979 - 0.979 - - - - Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
41. B0261.7 B0261.7 10300 1.958 - 0.979 - 0.979 - - - -
42. C27A2.1 smc-5 2176 1.958 - 0.979 - 0.979 - - - - SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_494935]
43. F14B4.3 rpoa-2 7549 1.958 - 0.979 - 0.979 - - - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
44. F39H11.5 pbs-7 13631 1.958 - 0.979 - 0.979 - - - - Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
45. C44B9.4 athp-1 1278 1.958 - 0.979 - 0.979 - - - - AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_499397]
46. Y116A8C.42 snr-1 17062 1.958 - 0.979 - 0.979 - - - - Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
47. Y110A7A.8 prp-31 4436 1.958 - 0.979 - 0.979 - - - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
48. K01G5.4 ran-1 32379 1.958 - 0.979 - 0.979 - - - - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
49. R04F11.3 R04F11.3 10000 1.956 - 0.978 - 0.978 - - - -
50. Y37D8A.11 cec-7 8801 1.956 - 0.978 - 0.978 - - - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
51. H35B03.2 H35B03.2 3335 1.956 - 0.978 - 0.978 - - - -
52. ZK1236.7 ufbp-1 6217 1.956 - 0.978 - 0.978 - - - - DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
53. T19B4.2 npp-7 13073 1.956 - 0.978 - 0.978 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
54. ZK1128.6 ttll-4 6059 1.956 - 0.978 - 0.978 - - - - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
55. B0464.5 spk-1 35112 1.956 - 0.978 - 0.978 - - - - Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
56. C16A3.4 C16A3.4 10030 1.956 - 0.978 - 0.978 - - - -
57. C47B2.3 tba-2 31086 1.956 - 0.978 - 0.978 - - - - Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
58. K07A1.12 lin-53 15817 1.956 - 0.978 - 0.978 - - - - Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
59. K04G7.11 K04G7.11 6153 1.956 - 0.978 - 0.978 - - - - Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
60. ZK616.5 ZK616.5 10527 1.956 - 0.978 - 0.978 - - - -
61. F46B6.3 smg-4 4959 1.956 - 0.978 - 0.978 - - - - Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
62. Y37A1B.1 lst-3 10739 1.956 - 0.978 - 0.978 - - - - Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
63. F10E9.5 F10E9.5 7671 1.954 - 0.977 - 0.977 - - - -
64. F18E2.3 scc-3 13464 1.954 - 0.977 - 0.977 - - - - Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
65. T25G3.3 T25G3.3 7285 1.954 - 0.977 - 0.977 - - - -
66. F21C3.4 rde-2 6286 1.954 - 0.977 - 0.977 - - - -
67. C48B4.11 C48B4.11 4384 1.954 - 0.977 - 0.977 - - - -
68. ZK809.5 ZK809.5 5228 1.954 - 0.977 - 0.977 - - - -
69. D2096.2 praf-3 18471 1.954 - 0.977 - 0.977 - - - - Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
70. F17C11.10 F17C11.10 4355 1.954 - 0.977 - 0.977 - - - -
71. F01F1.7 ddx-23 4217 1.954 - 0.977 - 0.977 - - - - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
72. C53D5.6 imb-3 28921 1.954 - 0.977 - 0.977 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
73. D1037.1 D1037.1 4248 1.954 - 0.977 - 0.977 - - - -
74. ZK858.7 ZK858.7 2817 1.954 - 0.977 - 0.977 - - - -
75. C25D7.8 otub-1 7941 1.954 - 0.977 - 0.977 - - - - Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
76. F25D7.4 maph-1.2 15903 1.954 - 0.977 - 0.977 - - - - Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_001251372]
77. C14A4.4 crn-3 6558 1.954 - 0.977 - 0.977 - - - - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
78. C34E10.2 gop-2 5684 1.954 - 0.977 - 0.977 - - - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
79. C56C10.3 vps-32.1 24107 1.952 - 0.976 - 0.976 - - - - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
80. M03C11.3 M03C11.3 9388 1.952 - 0.976 - 0.976 - - - -
81. F56C9.3 F56C9.3 7447 1.952 - 0.976 - 0.976 - - - -
82. F41E6.4 smk-1 22394 1.952 - 0.976 - 0.976 - - - - SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
83. F36A2.1 cids-2 4551 1.952 - 0.976 - 0.976 - - - - pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
84. D2089.1 rsp-7 11057 1.952 - 0.976 - 0.976 - - - - Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
85. T21E12.4 dhc-1 20370 1.952 - 0.976 - 0.976 - - - - Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
86. Y50D4A.1 Y50D4A.1 2766 1.952 - 0.976 - 0.976 - - - -
87. F37A4.8 isw-1 9337 1.952 - 0.976 - 0.976 - - - - Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
88. Y62E10A.11 mdt-9 5971 1.952 - 0.976 - 0.976 - - - - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
89. Y54G9A.6 bub-3 9123 1.952 - 0.976 - 0.976 - - - - yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
90. Y23H5A.3 Y23H5A.3 4195 1.952 - 0.976 - 0.976 - - - -
91. DY3.2 lmn-1 22449 1.952 - 0.976 - 0.976 - - - - Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
92. F38A5.13 dnj-11 19678 1.952 - 0.976 - 0.976 - - - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
93. K03H1.2 mog-1 4057 1.952 - 0.976 - 0.976 - - - - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
94. E01A2.2 E01A2.2 12356 1.952 - 0.976 - 0.976 - - - - Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
95. Y65B4BL.2 deps-1 18277 1.952 - 0.976 - 0.976 - - - -
96. K06H7.6 apc-2 2979 1.952 - 0.976 - 0.976 - - - - Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514]
97. T09A5.5 T09A5.5 4514 1.952 - 0.976 - 0.976 - - - -
98. M01E5.5 top-1 25458 1.952 - 0.976 - 0.976 - - - - DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
99. T27F2.1 skp-1 3532 1.952 - 0.976 - 0.976 - - - - mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
100. C43E11.3 met-1 7581 1.95 - 0.975 - 0.975 - - - - Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]

There are 1521 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA