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Experiment herm4, section s43.

Sample reads: 56,170. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 294.00 5234.23 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. ZC404.8 spn-4 245.00 4361.86 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
3. T06E6.2 cyb-3 228.00 4059.20 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
4. Y24D9A.4 rpl-7A 216.00 3845.56 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
5. B0280.5 cpg-2 207.00 3685.33 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
6. H02I12.1 cbd-1 204.00 3631.92 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
7. F42C5.8 rps-8 191.00 3400.47 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
8. F52E1.1 pos-1 189.00 3364.86 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
9. B0041.4 rpl-4 185.00 3293.65 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
10. F54E7.2 rps-12 181.00 3222.43 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
11. ZC513.6 oma-2 173.00 3080.01
12. F43D9.4 sip-1 171.00 3044.40 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
13. Y18D10A.17 car-1 165.00 2937.58 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
14. R13A5.8 rpl-9 163.00 2901.97 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
15. W02A2.7 mex-5 163.00 2901.97 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
16. T04C12.4 act-3 156.00 2777.35 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
17. T27E9.1 ant-1.1 156.00 2777.35 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
18. F25H2.5 ndk-1 152.00 2706.13 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
19. C25A1.8 clec-87 142.00 2528.10 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
20. F13B10.2 rpl-3 142.00 2528.10 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
21. C07H6.5 cgh-1 140.00 2492.49 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
22. T04C12.6 act-1 138.00 2456.88 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
23. C49H3.11 rps-2 137.00 2439.08 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
24. E04A4.7 cyc-2.1 137.00 2439.08 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
25. R05G6.7 vdac-1 137.00 2439.08 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
26. F46F11.2 cey-2 135.00 2403.47 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
27. F53G12.5 mex-3 133.00 2367.87 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
28. F54C9.8 puf-5 132.00 2350.06 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
29. Y45F10A.2 puf-3 128.00 2278.85 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_502606]
30. F40F11.1 rps-11 127.00 2261.05 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
31. Y105E8A.16 rps-20 127.00 2261.05 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
32. W08E12.7 W08E12.7 122.00 2172.03
33. C44B12.5 perm-4 118.00 2100.81 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
34. F02A9.3 far-2 118.00 2100.81 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
35. F56E10.4 rps-27 118.00 2100.81 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
36. F54C9.5 rpl-5 112.00 1993.99 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
37. W05F2.3 W05F2.3 112.00 1993.99
38. RIT1P.688 111.00 1976.19
39. ZC434.2 rps-7 111.00 1976.19 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
40. M7.1 let-70 109.00 1940.58 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
41. D1007.6 rps-10 108.00 1922.78 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
42. W09C5.6 rpl-31 106.00 1887.17 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
43. Y48B6A.14 hmg-1.1 105.00 1869.37 HMG [Source:RefSeq peptide;Acc:NP_496970]
44. C56C10.8 icd-1 103.00 1833.76 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
45. Y82E9BR.3 Y82E9BR.3 100.00 1780.35 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
46. C04F12.4 rpl-14 98.60 1755.43 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
47. F39B2.6 rps-26 98.60 1755.43 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
48. ZC168.4 cyb-1 98.60 1755.43 G2/mitotic-specific cyclin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q10653]
49. C28D4.3 gln-6 97.20 1730.50 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_501733]
50. T22F3.3 T22F3.3 97.20 1730.50 Alpha-1,4 glucan phosphorylase [Source:RefSeq peptide;Acc:NP_504007]
51. B0250.1 rpl-2 95.70 1703.80 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
52. C06A1.1 cdc-48.1 95.70 1703.80 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
53. Y111B2A.18 rsp-3 95.70 1703.80 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
54. Y71F9AL.13 rpl-1 95.70 1703.80 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
55. F52B5.6 rpl-25.2 94.30 1678.87 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
56. F01G4.6 F01G4.6 92.80 1652.17 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
57. F10B5.1 rpl-10 92.80 1652.17 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
58. R02F2.1 R02F2.1 92.80 1652.17
59. AH6.5 mex-6 91.40 1627.24 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
60. C07G2.1 cpg-1 91.40 1627.24 Chondroitin proteoglycan 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17802]
61. F57B9.5 byn-1 91.40 1627.24 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
62. F36A2.6 rps-15 88.60 1577.39 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
63. Y65B4BL.5 acs-13 87.20 1552.47 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_001293195]
64. F28C6.7 rpl-26 84.40 1502.62 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
65. W06A7.3 ret-1 84.40 1502.62 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
66. Y71A12B.1 rps-6 84.40 1502.62 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
67. T04C12.5 act-2 83.00 1477.69 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
68. T07A9.14 T07A9.14 83.00 1477.69
69. Y75B12B.2 cyn-7 83.00 1477.69 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
70. ZC395.10 ZC395.10 83.00 1477.69 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
71. F58A4.10 ubc-7 81.60 1452.77 Probable ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:P34477]
72. Y106G6H.2 pab-1 81.60 1452.77 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
73. C42C1.14 rpl-34 80.20 1427.84 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
74. Y48B6A.2 rpl-43 78.90 1404.70 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
75. C09G9.6 oma-1 77.50 1379.77
76. F26E4.8 tba-1 77.50 1379.77 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_001251213]
77. F53A3.3 rps-22 77.50 1379.77 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
78. T05E11.1 rps-5 77.50 1379.77 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
79. C14B9.7 rpl-21 76.20 1356.63 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
80. F37C12.4 rpl-36 76.20 1356.63 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
81. K08D12.3 K08D12.3 76.20 1356.63
82. C05C10.5 C05C10.5 74.80 1331.70
83. K01G5.4 ran-1 74.80 1331.70 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
84. Y57G11C.15 sec-61 74.80 1331.70 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
85. C47E8.11 C47E8.11 73.50 1308.56
86. F11C3.3 unc-54 73.50 1308.56 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
87. F25H2.10 rla-0 73.50 1308.56 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
88. R151.3 rpl-6 73.50 1308.56 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
89. T07A9.6 daf-18 73.50 1308.56 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
90. T22F3.4 rpl-11.1 73.50 1308.56 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
91. F37C12.9 rps-14 72.20 1285.41 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
92. F59A2.1 npp-9 72.20 1285.41 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
93. F14B4.2 hxk-1 70.80 1260.49 Hexokinase [Source:RefSeq peptide;Acc:NP_001021107]
94. M01F1.2 rpl-16 70.80 1260.49 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
95. T05F1.3 rps-19 70.80 1260.49 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
96. Y45F10D.12 rpl-18 70.80 1260.49 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
97. K02F2.2 ahcy-1 69.50 1237.34 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
98. K07H8.10 K07H8.10 69.50 1237.34
99. W03D2.4 pcn-1 69.50 1237.34 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
100. F49E11.1 mbk-2 68.20 1214.20 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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