C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm3, section s46.

Sample reads: 93. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. M7.1 let-70 3.01 32362.11 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
2. Y24D9A.4 rpl-7A 2.00 21503.06 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
3. B0336.1 wrm-1 1.00 10751.53 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
4. B0464.5 spk-1 1.00 10751.53 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
5. B0513.3 rpl-29 1.00 10751.53 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
6. C02F4.1 ced-5 1.00 10751.53 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
7. C02F5.3 C02F5.3 1.00 10751.53 Uncharacterized GTP-binding protein C02F5.3 [Source:UniProtKB/Swiss-Prot;Acc:P34280]
8. C05D11.10 mrps-17 1.00 10751.53 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
9. C08B11.5 sap-49 1.00 10751.53 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
10. C37A2.7 C37A2.7 1.00 10751.53 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
11. C37C3.2 C37C3.2 1.00 10751.53 Eukaryotic translation initiation factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q22918]
12. C37C3.6 mig-6 1.00 10751.53 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
13. C38C3.5 unc-60 1.00 10751.53 Actin-depolymerizing factor 2, isoform c [Source:UniProtKB/Swiss-Prot;Acc:Q07749]
14. C43E11.5 C43E11.5 1.00 10751.53
15. C47E8.11 C47E8.11 1.00 10751.53
16. C49H3.11 rps-2 1.00 10751.53 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
17. C50C3.8 bath-42 1.00 10751.53 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
18. C52E4.4 rpt-1 1.00 10751.53 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
19. C54G4.8 cyc-1 1.00 10751.53 CYtochrome C [Source:RefSeq peptide;Acc:NP_492207]
20. C56C10.8 icd-1 1.00 10751.53 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
21. D1007.12 rpl-24.1 1.00 10751.53 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
22. D2023.6 D2023.6 1.00 10751.53
23. F02A9.3 far-2 1.00 10751.53 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
24. F13H10.3 F13H10.3 1.00 10751.53 Sodium-coupled neutral amino acid transporter 9 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19425]
25. F14D2.13 bath-28 1.00 10751.53 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
26. F23F1.5 F23F1.5 1.00 10751.53 Snurportin-1 [Source:RefSeq peptide;Acc:NP_493639]
27. F25H2.8 ubc-25 1.00 10751.53 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
28. F25H5.3 pyk-1 1.00 10751.53 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
29. F27D4.4 F27D4.4 1.00 10751.53 Zinc finger CCCH domain-containing protein 15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93618]
30. F29B9.5 F29B9.5 1.00 10751.53
31. F31E3.5 eef-1A.1 1.00 10751.53 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
32. F32H2.4 thoc-3 1.00 10751.53 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
33. F37B12.3 F37B12.3 1.00 10751.53
34. F37C12.4 rpl-36 1.00 10751.53 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
35. F38E1.9 F38E1.9 1.00 10751.53 Mannose-P-dolichol utilization defect 1 protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q20157]
36. F39B2.6 rps-26 1.00 10751.53 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
37. F43G9.1 idha-1 1.00 10751.53 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93714]
38. F44E2.10 F44E2.10 1.00 10751.53
39. F52A8.5 F52A8.5 1.00 10751.53
40. F53F4.12 F53F4.12 1.00 10751.53
41. F53G12.5 mex-3 1.00 10751.53 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
42. F54C9.5 rpl-5 1.00 10751.53 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
43. F55D10.2 rpl-25.1 1.00 10751.53 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
44. F57B1.3 col-159 1.00 10751.53 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
45. F57B9.2 let-711 1.00 10751.53 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
46. H12D21.13 nspa-4 1.00 10751.53 Nematode Specific Peptide family, group A [Source:RefSeq peptide;Acc:NP_506664]
47. H24K24.3 H24K24.3 1.00 10751.53 Alcohol dehydrogenase class-3 [Source:UniProtKB/Swiss-Prot;Acc:Q17335]
48. H28O16.1 H28O16.1 1.00 10751.53 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
49. K01A2.8 mps-2 1.00 10751.53 MiRP K channel accessory Subunit [Source:RefSeq peptide;Acc:NP_493704]
50. K04C2.3 K04C2.3 1.00 10751.53
51. K06A5.7 cdc-25.1 1.00 10751.53 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
52. K06B9.2 K06B9.2 1.00 10751.53
53. K08F9.2 aipl-1 1.00 10751.53 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
54. K10B2.5 ani-2 1.00 10751.53 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
55. M57.2 M57.2 1.00 10751.53
56. R05G6.7 vdac-1 1.00 10751.53 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
57. R10E9.1 msi-1 1.00 10751.53 MuSashI (fly neural) family [Source:RefSeq peptide;Acc:NP_497799]
58. R11A5.4 pck-2 1.00 10751.53 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
59. RIT1P.688 1.00 10751.53
60. T01C3.6 rps-16 1.00 10751.53 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
61. T02G5.4 T02G5.4 1.00 10751.53
62. T04C12.1 T04C12.1 1.00 10751.53
63. T05H10.5 ufd-2 1.00 10751.53 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
64. T07A9.14 T07A9.14 1.00 10751.53
65. T07C4.3 T07C4.3 1.00 10751.53
66. T09F3.2 T09F3.2 1.00 10751.53 Carrier protein (C2); Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEG6]
67. T13F2.10 msp-79 1.00 10751.53 Major sperm protein 77/79 [Source:UniProtKB/Swiss-Prot;Acc:Q9TVW5]
68. T22H6.6 gei-3 1.00 10751.53 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_001076772]
69. T24C4.1 ucr-2.3 1.00 10751.53 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
70. W03F8.1 tni-4 1.00 10751.53 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
71. W09D10.3 mrpl-12 1.00 10751.53 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499360]
72. Y105E8A.16 rps-20 1.00 10751.53 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
73. Y24D9A.8 Y24D9A.8 1.00 10751.53 Transaldolase [Source:RefSeq peptide;Acc:NP_741369]
74. Y38F2AR.9 Y38F2AR.9 1.00 10751.53
75. Y38H6C.1 dct-16 1.00 10751.53 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
76. Y45F10D.12 rpl-18 1.00 10751.53 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
77. Y47G6A.33 Y47G6A.33 1.00 10751.53
78. Y48B6A.14 hmg-1.1 1.00 10751.53 HMG [Source:RefSeq peptide;Acc:NP_496970]
79. Y48G1A.2 Y48G1A.2 1.00 10751.53
80. Y54E10A.9 vbh-1 1.00 10751.53 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
81. Y54G11A.11 Y54G11A.11 1.00 10751.53 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
82. Y54G2A.14 clec-83 1.00 10751.53 C-type LECtin [Source:RefSeq peptide;Acc:NP_500260]
83. Y54H5A.1 Y54H5A.1 1.00 10751.53
84. Y57G11C.15 sec-61 1.00 10751.53 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
85. Y67H2A.5 Y67H2A.5 1.00 10751.53
86. Y74C9A.2 nlp-40 1.00 10751.53 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001293206]
87. Y75B8A.8 Y75B8A.8 1.00 10751.53
88. ZC101.2 unc-52 1.00 10751.53 Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]
89. ZK354.5 msp-51 1.00 10751.53 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
90. ZK593.3 ZK593.3 1.00 10751.53
91. AC3.5 AC3.5 0.00 0.00 Aminopeptidase-like protein AC3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q17405]
92. AC7.2 soc-2 0.00 0.00 Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]
93. AH10.1 acs-10 0.00 0.00 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_506502]
94. AH6.2 sfxn-1.1 0.00 0.00 Putative sideroflexin-1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09201]
95. AH6.3 AH6.3 0.00 0.00
96. AH6.5 mex-6 0.00 0.00 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
97. AH9.2 crn-4 0.00 0.00 Cell death-related nuclease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q10905]
98. AH9.3 AH9.3 0.00 0.00
99. B0001.1 lin-24 0.00 0.00
100. B0001.2 B0001.2 0.00 0.00
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA