C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F57B1.3

Gene ID Gene Name Reads Transcripts Annotation
F57B1.3 col-159 28012 F57B1.3 COLlagen [Source:RefSeq peptide;Acc:NP_506283]

Genes with expression patterns similar to F57B1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F57B1.3 col-159 28012 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
2. W05B2.5 col-93 64768 7.55 0.972 0.933 0.906 0.933 0.958 0.993 0.887 0.968 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
3. C09G5.5 col-80 59933 7.549 0.977 0.940 0.908 0.940 0.946 0.989 0.876 0.973 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
4. F57B1.4 col-160 137661 7.505 0.957 0.920 0.899 0.920 0.952 0.986 0.890 0.981 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
5. W05B2.6 col-92 29501 7.415 0.976 0.901 0.918 0.901 0.958 0.980 0.810 0.971 COLlagen [Source:RefSeq peptide;Acc:NP_499408]
6. F26F12.1 col-140 160999 7.371 0.973 0.904 0.913 0.904 0.938 0.981 0.808 0.950 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
7. F38A3.1 col-81 56859 7.332 0.978 0.934 0.906 0.934 0.867 0.959 0.870 0.884 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
8. K04D7.3 gta-1 20812 7.317 0.941 0.896 0.898 0.896 0.935 0.952 0.864 0.935 Probable 4-aminobutyrate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q21217]
9. F11G11.11 col-20 174687 7.316 0.959 0.922 0.912 0.922 0.909 0.925 0.790 0.977 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
10. ZK1193.1 col-19 102505 7.313 0.956 0.940 0.939 0.940 0.831 0.962 0.799 0.946 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
11. C24F3.6 col-124 156254 7.31 0.972 0.928 0.907 0.928 0.916 0.935 0.792 0.932 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
12. C34F6.3 col-179 100364 7.293 0.966 0.916 0.948 0.916 0.919 0.951 0.800 0.877 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
13. C15H9.7 flu-2 6738 7.28 0.941 0.928 0.836 0.928 0.954 0.965 0.869 0.859 Kynureninase [Source:UniProtKB/Swiss-Prot;Acc:Q18026]
14. C34F6.2 col-178 152954 7.269 0.971 0.936 0.935 0.936 0.802 0.959 0.803 0.927 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
15. C49F5.1 sams-1 101229 7.257 0.828 0.885 0.942 0.885 0.935 0.971 0.880 0.931 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
16. R03E1.2 vha-20 25289 7.241 0.945 0.890 0.948 0.890 0.924 0.963 0.796 0.885 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_510360]
17. ZK622.3 pmt-1 24220 7.235 0.875 0.875 0.916 0.875 0.932 0.960 0.900 0.902 Phosphoethanolamine MethylTransferase [Source:RefSeq peptide;Acc:NP_494990]
18. F41E7.5 fipr-21 37102 7.226 0.944 0.893 0.930 0.893 0.923 0.990 0.720 0.933 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_509727]
19. W03G11.1 col-181 100180 7.202 0.950 0.944 0.819 0.944 0.929 0.951 0.706 0.959 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
20. T15B7.3 col-143 71255 7.199 0.950 0.801 0.887 0.801 0.960 0.982 0.856 0.962 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
21. Y77E11A.15 col-106 105434 7.177 0.954 0.905 0.778 0.905 0.927 0.969 0.783 0.956 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
22. F17C8.4 ras-2 7248 7.145 0.915 0.883 0.878 0.883 0.945 0.972 0.827 0.842 R-RAS related [Source:RefSeq peptide;Acc:NP_497972]
23. F55D10.2 rpl-25.1 95984 7.14 0.958 0.829 0.834 0.829 0.949 0.952 0.859 0.930 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
24. F07C4.7 grsp-4 3454 7.132 0.965 0.927 0.903 0.927 0.779 0.969 0.747 0.915 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_504970]
25. F54C9.1 iff-2 63995 7.096 0.946 0.836 0.805 0.836 0.945 0.952 0.855 0.921 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
26. R11A5.4 pck-2 55256 7.084 0.917 0.873 0.822 0.873 0.940 0.959 0.804 0.896 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
27. T27D12.2 clh-1 6001 7.081 0.938 0.906 0.900 0.906 0.905 0.950 0.714 0.862 Chloride channel protein [Source:RefSeq peptide;Acc:NP_001022373]
28. C55B7.4 acdh-1 52311 7.05 0.872 0.805 0.905 0.805 0.936 0.957 0.907 0.863 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
29. F15A2.1 col-184 74319 7.042 0.966 0.873 0.750 0.873 0.910 0.921 0.775 0.974 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
30. F18E3.13 F18E3.13 8001 7.032 0.862 0.853 0.837 0.853 0.883 0.968 0.853 0.923
31. B0213.3 nlp-28 12751 7.01 0.937 0.823 0.840 0.823 0.928 0.974 0.754 0.931 Neuropeptide-like protein 28 QWGYGGY-amide GYGGYGGY-amide GMYGGY-amide GMYGGW-amide [Source:UniProtKB/Swiss-Prot;Acc:O44665]
32. K03A1.5 sur-5 14762 7.006 0.884 0.857 0.868 0.857 0.880 0.971 0.816 0.873 Acetoacetyl-CoA synthetase [Source:UniProtKB/Swiss-Prot;Acc:Q21166]
33. F46F11.5 vha-10 61918 7.002 0.938 0.832 0.889 0.832 0.914 0.959 0.800 0.838 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
34. R01E6.3 cah-4 42749 6.999 0.918 0.829 0.808 0.829 0.942 0.972 0.839 0.862 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
35. T14F9.1 vha-15 32310 6.981 0.884 0.834 0.870 0.834 0.914 0.982 0.829 0.834 Probable V-type proton ATPase subunit H 2 [Source:UniProtKB/Swiss-Prot;Acc:Q22494]
36. Y66A7A.6 gly-8 5963 6.972 0.885 0.881 0.838 0.881 0.907 0.963 0.741 0.876 Probable N-acetylgalactosaminyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:O45293]
37. Y55H10A.1 vha-19 38495 6.957 0.927 0.785 0.862 0.785 0.934 0.959 0.785 0.920 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_500332]
38. F41F3.4 col-139 56412 6.957 0.971 0.925 0.827 0.925 0.840 0.943 0.760 0.766 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
39. F20B6.2 vha-12 60816 6.951 0.862 0.818 0.857 0.818 0.922 0.973 0.849 0.852 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
40. C17H12.14 vha-8 74709 6.927 0.915 0.816 0.871 0.816 0.928 0.958 0.783 0.840 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
41. C28H8.11 tdo-2 5494 6.91 0.949 0.790 0.804 0.790 0.963 0.970 0.812 0.832 Tryptophan 2,3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q09474]
42. M18.1 col-129 100644 6.903 0.978 0.862 0.813 0.862 0.873 0.929 0.829 0.757 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
43. F31F6.6 nac-1 2617 6.897 0.921 0.836 0.905 0.836 0.864 0.966 0.644 0.925 Sodium-dependent low-affinity dicarboxylate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93655]
44. F35H8.6 ugt-58 5917 6.895 0.862 0.774 0.927 0.774 0.935 0.950 0.842 0.831 Putative UDP-glucuronosyltransferase ugt-58 [Source:UniProtKB/Swiss-Prot;Acc:Q20086]
45. C04F5.7 ugt-63 3693 6.888 0.916 0.888 0.779 0.888 0.804 0.963 0.712 0.938 UDP-GlucuronosylTransferase [Source:RefSeq peptide;Acc:NP_504369]
46. F07D10.1 rpl-11.2 64869 6.877 0.954 0.775 0.751 0.775 0.942 0.926 0.847 0.907 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
47. T04C10.4 atf-5 12715 6.87 0.850 0.723 0.886 0.723 0.921 0.959 0.889 0.919 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_510456]
48. F14F7.1 col-98 72968 6.84 0.913 0.806 0.771 0.806 0.920 0.980 0.758 0.886 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
49. C53B4.5 col-119 131020 6.821 0.964 0.851 0.881 0.851 0.666 0.975 0.758 0.875 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
50. H38K22.5 gly-6 2664 6.814 0.853 0.799 0.894 0.799 0.852 0.958 0.865 0.794 Probable N-acetylgalactosaminyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O61394]
51. K08F8.1 mak-1 14503 6.804 0.849 0.795 0.798 0.795 0.949 0.958 0.829 0.831 MAP kinase Activated protein Kinase [Source:RefSeq peptide;Acc:NP_001022239]
52. F08F3.3 rhr-1 12771 6.792 0.949 0.881 0.957 0.881 0.835 0.850 0.671 0.768 RH (Rhesus) antigen Related [Source:RefSeq peptide;Acc:NP_504436]
53. T01H3.1 vha-4 57474 6.783 0.871 0.770 0.850 0.770 0.891 0.965 0.822 0.844 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_495659]
54. T21C12.2 hpd-1 22564 6.749 0.904 0.831 0.762 0.831 0.930 0.971 0.823 0.697 4-hydroxyphenylpyruvate dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q22633]
55. K10B3.9 mai-1 161647 6.743 0.958 0.807 0.813 0.807 0.889 0.881 0.696 0.892 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
56. ZK721.2 unc-27 96175 6.743 0.952 0.768 0.781 0.768 0.886 0.910 0.822 0.856 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
57. K07D8.1 mup-4 15800 6.736 0.901 0.753 0.815 0.753 0.954 0.937 0.731 0.892 Transmembrane matrix receptor MUP-4 [Source:UniProtKB/Swiss-Prot;Acc:Q21281]
58. F09E10.3 dhs-25 9055 6.71 0.927 0.842 0.732 0.842 0.871 0.963 0.718 0.815 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_508282]
59. F49C12.13 vha-17 47854 6.663 0.858 0.720 0.821 0.720 0.938 0.956 0.786 0.864 V-type proton ATPase subunit e [Source:UniProtKB/Swiss-Prot;Acc:Q20591]
60. C01F6.6 nrfl-1 15103 6.663 0.893 0.750 0.845 0.750 0.936 0.958 0.765 0.766 NHERF (mammalian Na/H Exchange Regulatory Factor) Like [Source:RefSeq peptide;Acc:NP_741478]
61. T13C5.5 bca-1 8361 6.662 0.834 0.637 0.884 0.637 0.943 0.960 0.849 0.918 Beta carbonic anhydrase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22460]
62. B0213.2 nlp-27 38894 6.644 0.976 0.735 0.851 0.735 0.951 0.930 0.607 0.859 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
63. K03A1.2 lron-7 8745 6.635 0.804 0.800 0.860 0.800 0.882 0.953 0.717 0.819 eLRR (extracellular Leucine-Rich Repeat) ONly [Source:RefSeq peptide;Acc:NP_509227]
64. F56B3.1 col-103 45613 6.634 0.911 0.712 0.732 0.712 0.902 0.975 0.781 0.909 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
65. F11E6.5 elo-2 21634 6.627 0.899 0.791 0.842 0.791 0.816 0.958 0.765 0.765 Elongation of very long chain fatty acids protein [Source:RefSeq peptide;Acc:NP_503114]
66. F36A2.7 F36A2.7 44113 6.625 0.941 0.575 0.826 0.575 0.922 0.964 0.901 0.921
67. C41C4.10 sfxn-5 3747 6.62 0.950 0.777 0.850 0.777 0.857 0.956 0.714 0.739 Sideroflexin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q5FC79]
68. T25F10.6 clik-1 175948 6.58 0.962 0.696 0.851 0.696 0.827 0.909 0.779 0.860 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
69. F54C1.7 pat-10 205614 6.563 0.967 0.705 0.864 0.705 0.857 0.857 0.721 0.887 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
70. F13H8.7 upb-1 16734 6.546 0.969 0.796 0.870 0.796 0.850 0.813 0.674 0.778 UreidoPropionase Beta [Source:RefSeq peptide;Acc:NP_495261]
71. C18A11.7 dim-1 110263 6.545 0.958 0.740 0.733 0.740 0.890 0.920 0.700 0.864 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
72. F01F1.12 aldo-2 42507 6.469 0.739 0.639 0.785 0.639 0.929 0.968 0.863 0.907 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
73. F55F3.3 nkb-3 19665 6.464 0.959 0.789 0.849 0.789 0.859 0.834 0.763 0.622 Probable sodium/potassium-transporting ATPase subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUY5]
74. W04D2.1 atn-1 22582 6.398 0.952 0.772 0.717 0.772 0.855 0.833 0.692 0.805 AcTiniN [Source:RefSeq peptide;Acc:NP_001256424]
75. T15B7.4 col-142 51426 6.386 0.962 0.875 0.819 0.875 0.808 0.835 0.347 0.865 COLlagen [Source:RefSeq peptide;Acc:NP_504736]
76. C31E10.7 cytb-5.1 16344 6.28 0.934 0.716 0.800 0.716 0.739 0.957 0.636 0.782 YTochrome B [Source:RefSeq peptide;Acc:NP_510335]
77. F27D9.6 dhs-29 1921 6.267 0.899 0.601 0.882 0.601 0.919 0.952 0.763 0.650 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_509294]
78. C53B7.4 asg-2 33363 6.253 0.954 0.755 0.855 0.755 0.865 0.805 0.513 0.751 Probable ATP synthase subunit g 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q18803]
79. F21C10.10 F21C10.10 4983 6.219 0.810 0.605 0.720 0.605 0.854 0.967 0.810 0.848
80. K10C2.4 fah-1 33459 6.17 0.631 0.697 0.821 0.697 0.864 0.954 0.619 0.887 FumarylAcetoacetate Hydrolase [Source:RefSeq peptide;Acc:NP_509083]
81. K02D7.3 col-101 41809 6.168 0.803 0.517 0.721 0.517 0.936 0.973 0.828 0.873 COLlagen [Source:RefSeq peptide;Acc:NP_499905]
82. Y71F9B.2 Y71F9B.2 1523 6.136 0.936 0.349 0.904 0.349 0.943 0.964 0.779 0.912 Phosphatidate cytidylyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G7]
83. F23H11.2 F23H11.2 398 5.938 0.940 0.270 0.860 0.270 0.902 0.960 0.778 0.958 TATA box-binding protein-associated factor RNA polymerase I subunit B [Source:UniProtKB/Swiss-Prot;Acc:O01914]
84. W06A7.3 ret-1 58319 5.934 0.746 0.560 0.737 0.560 0.834 0.955 0.671 0.871 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
85. T14D7.2 oac-46 3484 5.931 0.860 0.769 0.790 0.769 0.795 0.959 0.366 0.623 O-ACyltransferase homolog [Source:RefSeq peptide;Acc:NP_495886]
86. K11G12.6 K11G12.6 591 5.83 0.852 0.301 0.901 0.301 0.950 0.944 0.816 0.765 Lipase maturation factor [Source:RefSeq peptide;Acc:NP_001041273]
87. K06A4.5 haao-1 5444 5.799 0.859 0.774 0.918 0.774 0.761 0.958 0.486 0.269 3-hydroxyanthranilate 3,4-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q19341]
88. Y75B8A.29 zip-12 2363 5.739 0.799 0.538 0.682 0.538 0.833 0.954 0.753 0.642 bZIP transcription factor family [Source:RefSeq peptide;Acc:NP_499601]
89. C27H6.4 rmd-2 9015 5.738 0.630 0.518 0.667 0.518 0.897 0.952 0.675 0.881 Regulator of Microtubule Dynamics [Source:RefSeq peptide;Acc:NP_741608]
90. W05B2.1 col-94 30273 5.592 0.962 - 0.912 - 0.948 0.991 0.810 0.969 COLlagen [Source:RefSeq peptide;Acc:NP_499410]
91. K04G2.10 K04G2.10 152 5.579 0.895 0.331 0.794 0.331 0.869 0.963 0.553 0.843
92. ZK632.10 ZK632.10 28231 5.567 0.587 0.339 0.675 0.339 0.921 0.955 0.831 0.920 UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
93. Y43F8C.20 grsp-1 19633 5.541 0.622 0.469 0.475 0.469 0.884 0.952 0.743 0.927 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_001024238]
94. F47B10.2 haly-1 3833 5.538 0.817 0.895 0.364 0.895 0.782 0.965 0.474 0.346 Histidine ammonia-lyase [Source:UniProtKB/Swiss-Prot;Acc:Q20502]
95. T19C4.7 nlp-33 28843 5.536 0.752 0.361 0.397 0.361 0.950 0.935 0.840 0.940 Neuropeptide-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZN4]
96. F32H2.5 fasn-1 16352 5.514 0.613 0.489 0.590 0.489 0.786 0.968 0.666 0.913 Fatty Acid SyNthase [Source:RefSeq peptide;Acc:NP_492417]
97. W01C8.1 W01C8.1 0 5.438 0.911 - 0.931 - 0.949 0.969 0.822 0.856
98. F56H11.2 F56H11.2 0 5.41 0.959 - 0.817 - 0.930 0.935 0.860 0.909
99. ZK742.6 ZK742.6 172 5.399 0.908 - 0.895 - 0.876 0.969 0.850 0.901
100. F18E9.1 F18E9.1 0 5.301 0.806 - 0.939 - 0.900 0.975 0.783 0.898

There are 56 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA