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Experiment herm2, section s40.

Sample reads: 151,907. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 508.00 3344.17 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. RIT1P.688 494.00 3252.01
3. ZC404.8 spn-4 468.00 3080.85 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
4. F53G12.5 mex-3 428.00 2817.53 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
5. C04F12.4 rpl-14 422.00 2778.03 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
6. F43D9.4 sip-1 402.00 2646.37 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
7. F31E3.5 eef-1A.1 388.00 2554.21 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
8. F46F11.2 cey-2 388.00 2554.21 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
9. T06E6.2 cyb-3 384.00 2527.88 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
10. F13B10.2 rpl-3 371.00 2442.30 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
11. C44B12.5 perm-4 362.00 2383.05 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
12. F42C5.8 rps-8 362.00 2383.05 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
13. F52E1.1 pos-1 358.00 2356.72 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
14. ZC513.6 oma-2 358.00 2356.72
15. B0280.5 cpg-2 350.00 2304.05 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
16. H02I12.1 cbd-1 350.00 2304.05 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
17. C42C1.14 rpl-34 342.00 2251.39 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
18. F25H2.5 ndk-1 339.00 2231.64 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
19. Y18D10A.17 car-1 339.00 2231.64 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
20. C06B8.8 rpl-38 335.00 2205.31 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
21. F37C12.4 rpl-36 335.00 2205.31 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
22. F36A2.6 rps-15 331.00 2178.98 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
23. F56E10.4 rps-27 324.00 2132.90 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
24. Y105E8A.16 rps-20 321.00 2113.15 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
25. Y71F9AL.13 rpl-1 321.00 2113.15 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
26. F40F11.1 rps-11 317.00 2086.82 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
27. E04A4.7 cyc-2.1 310.00 2040.73 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
28. B0041.4 rpl-4 300.00 1974.90 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
29. F02A9.3 far-2 297.00 1955.16 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
30. T27E9.1 ant-1.1 285.00 1876.16 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
31. C25A1.8 clec-87 279.00 1836.66 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
32. F52B5.6 rpl-25.2 279.00 1836.66 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
33. R05G6.7 vdac-1 279.00 1836.66 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
34. T07A9.14 T07A9.14 276.00 1816.91
35. W02A2.7 mex-5 270.00 1777.41 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
36. Y24D9A.4 rpl-7A 270.00 1777.41 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
37. D1007.6 rps-10 264.00 1737.92 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
38. F10B5.1 rpl-10 264.00 1737.92 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
39. ZC434.2 rps-7 264.00 1737.92 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
40. C14B9.7 rpl-21 256.00 1685.25 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
41. R09B3.3 R09B3.3 253.00 1665.50
42. F54C9.8 puf-5 251.00 1652.34 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
43. T04C12.6 act-1 251.00 1652.34 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
44. T22F3.4 rpl-11.1 251.00 1652.34 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
45. Y48B6A.14 hmg-1.1 251.00 1652.34 HMG [Source:RefSeq peptide;Acc:NP_496970]
46. R13A5.8 rpl-9 248.00 1632.59 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
47. C56C10.8 icd-1 238.00 1566.76 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
48. F39B2.6 rps-26 238.00 1566.76 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
49. B0513.3 rpl-29 235.00 1547.01 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
50. C49H3.11 rps-2 235.00 1547.01 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
51. W09C5.6 rpl-31 235.00 1547.01 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
52. F37C12.9 rps-14 233.00 1533.84 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
53. Y106G6H.2 pab-1 230.00 1514.09 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
54. K02B2.5 rps-25 228.00 1500.93 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
55. Y71A12B.1 rps-6 225.00 1481.18 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
56. C07G2.1 cpg-1 223.00 1468.01 Chondroitin proteoglycan 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17802]
57. C09H10.2 rpl-41 223.00 1468.01 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
58. F28C6.7 rpl-26 223.00 1468.01 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
59. M01F1.2 rpl-16 221.00 1454.85 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
60. K08D12.6 K08D12.6 211.00 1389.02
61. Y57G11C.15 sec-61 209.00 1375.85 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
62. B0393.1 rps-0 207.00 1362.68 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
63. K08D12.3 K08D12.3 207.00 1362.68
64. C07H6.5 cgh-1 202.00 1329.77 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
65. C16A3.9 rps-13 200.00 1316.60 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
66. F49E11.1 mbk-2 200.00 1316.60 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
67. Y75B12B.2 cyn-7 200.00 1316.60 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
68. C06A1.1 cdc-48.1 198.00 1303.44 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
69. F28D1.7 rps-23 198.00 1303.44 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
70. K11H12.2 rpl-15 198.00 1303.44 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
71. T04C12.4 act-3 198.00 1303.44 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
72. ZK1010.1 ubq-2 196.00 1290.27 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
73. K02F2.2 ahcy-1 194.00 1277.10 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
74. C05C10.5 C05C10.5 191.00 1257.36
75. D2096.8 nap-1 191.00 1257.36 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
76. R08C7.3 htz-1 191.00 1257.36 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
77. W05F2.3 W05F2.3 191.00 1257.36
78. F23A7.8 F23A7.8 189.00 1244.19
79. M7.1 let-70 189.00 1244.19 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
80. M01E5.5 top-1 187.00 1231.02 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
81. Y45F10D.12 rpl-18 187.00 1231.02 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
82. F26D10.3 hsp-1 185.00 1217.86 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
83. W01D2.1 W01D2.1 185.00 1217.86 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
84. T05F1.3 rps-19 181.00 1191.53 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
85. Y69A2AR.18 Y69A2AR.18 181.00 1191.53
86. F07A5.7 unc-15 179.00 1178.36 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
87. Y111B2A.18 rsp-3 179.00 1178.36 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
88. ZC395.10 ZC395.10 179.00 1178.36 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
89. AH6.5 mex-6 175.00 1152.03 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
90. C23G10.3 rps-3 175.00 1152.03 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
91. F14B4.2 hxk-1 175.00 1152.03 Hexokinase [Source:RefSeq peptide;Acc:NP_001021107]
92. F40F8.10 rps-9 175.00 1152.03 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
93. C28D4.3 gln-6 173.00 1138.86 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_501733]
94. F29B9.5 F29B9.5 173.00 1138.86
95. F59D8.2 vit-4 173.00 1138.86 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
96. T19H12.2 T19H12.2 173.00 1138.86 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
97. R10E11.8 vha-1 171.00 1125.70 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
98. Y43B11AR.4 rps-4 171.00 1125.70 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
99. ZC168.4 cyb-1 171.00 1125.70 G2/mitotic-specific cyclin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q10653]
100. R151.3 rpl-6 167.00 1099.36 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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