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Experiment herm2, section s24.

Sample reads: 672,438. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 3180.00 4729.10 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. T27E9.1 ant-1.1 3180.00 4729.10 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
3. W09C5.6 rpl-31 3180.00 4729.10 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
4. Y18D10A.17 car-1 3180.00 4729.10 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
5. C44B12.5 perm-4 1420.00 2111.74 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
6. E04A4.7 cyc-2.1 1420.00 2111.74 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
7. F13B10.2 rpl-3 1420.00 2111.74 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
8. F31E3.5 eef-1A.1 1420.00 2111.74 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
9. F56E10.4 rps-27 1420.00 2111.74 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
10. R05G6.7 vdac-1 1420.00 2111.74 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
11. B0041.4 rpl-4 1240.00 1844.05 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
12. C04F12.4 rpl-14 1240.00 1844.05 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
13. C07H6.5 cgh-1 1240.00 1844.05 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
14. F36A2.6 rps-15 1240.00 1844.05 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
15. K02F2.2 ahcy-1 1240.00 1844.05 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
16. K08D12.3 K08D12.3 1240.00 1844.05
17. T04C12.5 act-2 1240.00 1844.05 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
18. Y24D9A.4 rpl-7A 1240.00 1844.05 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
19. Y48B6A.14 hmg-1.1 1240.00 1844.05 HMG [Source:RefSeq peptide;Acc:NP_496970]
20. C49H3.11 rps-2 1140.00 1695.34 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
21. C56C10.8 icd-1 1140.00 1695.34 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
22. F52B5.6 rpl-25.2 1140.00 1695.34 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
23. K08D12.6 K08D12.6 1140.00 1695.34
24. K11H12.2 rpl-15 1140.00 1695.34 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
25. R13A5.8 rpl-9 1140.00 1695.34 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
26. RIT1P.688 1140.00 1695.34
27. Y71F9AL.13 rpl-1 1140.00 1695.34 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
28. B0280.5 cpg-2 1060.00 1576.37 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
29. C42C1.14 rpl-34 1060.00 1576.37 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
30. D1007.6 rps-10 1060.00 1576.37 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
31. F01G4.6 F01G4.6 1060.00 1576.37 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
32. F02A9.3 far-2 1060.00 1576.37 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
33. F26D10.3 hsp-1 1060.00 1576.37 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
34. F39B2.6 rps-26 1060.00 1576.37 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
35. F40F11.1 rps-11 1060.00 1576.37 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
36. T06E6.2 cyb-3 1060.00 1576.37 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
37. Y57G11C.15 sec-61 1060.00 1576.37 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
38. Y75B12B.2 cyn-7 1060.00 1576.37 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
39. C34E10.6 atp-2 1010.00 1502.01 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
40. F25H2.5 ndk-1 1010.00 1502.01 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
41. F42C5.8 rps-8 1010.00 1502.01 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
42. F59D8.1 vit-3 1010.00 1502.01 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
43. F59D8.2 vit-4 1010.00 1502.01 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
44. Y106G6H.2 pab-1 1010.00 1502.01 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
45. Y69A2AR.18 Y69A2AR.18 1010.00 1502.01
46. Y82E9BR.3 Y82E9BR.3 1010.00 1502.01 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
47. ZC395.10 ZC395.10 1010.00 1502.01 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
48. C14B9.7 rpl-21 959.00 1426.17 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
49. F28C6.7 rpl-26 959.00 1426.17 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
50. H02I12.1 cbd-1 959.00 1426.17 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
51. R10E11.8 vha-1 959.00 1426.17 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
52. T04C12.6 act-1 959.00 1426.17 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
53. T07A9.14 T07A9.14 959.00 1426.17
54. W08E12.7 W08E12.7 959.00 1426.17
55. Y105E8A.16 rps-20 959.00 1426.17 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
56. Y111B2A.18 rsp-3 959.00 1426.17 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
57. Y56A3A.21 trap-4 959.00 1426.17 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
58. ZC434.2 rps-7 959.00 1426.17 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
59. B0250.1 rpl-2 920.00 1368.17 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
60. F27C1.7 atp-3 920.00 1368.17 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
61. F46F11.2 cey-2 920.00 1368.17 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
62. M01F1.2 rpl-16 920.00 1368.17 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
63. T04C12.4 act-3 920.00 1368.17 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
64. C06A1.1 cdc-48.1 885.00 1316.12 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
65. C08H9.2 vgln-1 885.00 1316.12 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
66. D2096.8 nap-1 885.00 1316.12 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
67. F10B5.1 rpl-10 885.00 1316.12 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
68. F37C12.4 rpl-36 885.00 1316.12 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
69. F57B1.4 col-160 885.00 1316.12 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
70. K07H8.10 K07H8.10 885.00 1316.12
71. M7.1 let-70 885.00 1316.12 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
72. T22F3.4 rpl-11.1 885.00 1316.12 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
73. T23G11.3 gld-1 885.00 1316.12 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
74. W02A2.7 mex-5 885.00 1316.12 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
75. Y45F10D.12 rpl-18 885.00 1316.12 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
76. Y71A12B.1 rps-6 885.00 1316.12 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
77. F57B9.5 byn-1 855.00 1271.50 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
78. F43D9.4 sip-1 828.00 1231.35 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
79. F54C9.5 rpl-5 828.00 1231.35 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
80. T05C12.7 cct-1 828.00 1231.35 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
81. T05F1.3 rps-19 828.00 1231.35 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
82. T19H12.2 T19H12.2 828.00 1231.35 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
83. Y57G11C.16 rps-18 828.00 1231.35 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
84. C06B8.8 rpl-38 804.00 1195.66 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
85. F54C9.8 puf-5 804.00 1195.66 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
86. Y48B6A.2 rpl-43 804.00 1195.66 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
87. Y71F9AM.6 trap-1 804.00 1195.66 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_491076]
88. ZC404.8 spn-4 804.00 1195.66 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
89. ZC513.6 oma-2 804.00 1195.66
90. B0393.1 rps-0 782.00 1162.94 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
91. B0513.3 rpl-29 782.00 1162.94 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
92. C42D8.2 vit-2 782.00 1162.94 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
93. R09B3.3 R09B3.3 782.00 1162.94
94. C26F1.4 rps-30 761.00 1131.71 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
95. F52E1.1 pos-1 761.00 1131.71 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
96. W01D2.1 W01D2.1 761.00 1131.71 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
97. F09F7.2 mlc-3 743.00 1104.94 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
98. F11C3.3 unc-54 743.00 1104.94 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
99. M03F4.2 act-4 743.00 1104.94 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
100. C09H10.2 rpl-41 725.00 1078.18 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA