C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm1, section s48.

Sample reads: 4,723. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F02A9.3 far-2 91.40 19351.66 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
2. K08D12.6 K08D12.6 84.40 17869.58
3. Y77E11A.15 col-106 45.80 9697.00 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
4. T05A1.2 col-122 44.60 9442.93 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
5. F02A9.2 far-1 42.20 8934.79 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
6. F11E6.3 F11E6.3 42.20 8934.79
7. C24F3.6 col-124 41.00 8680.72 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
8. M18.1 col-129 37.60 7960.86 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
9. T04C12.6 act-1 35.30 7473.89 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
10. F15A2.1 col-184 34.10 7219.82 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
11. F57B1.4 col-160 34.10 7219.82 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
12. C06A8.3 C06A8.3 33.00 6986.92
13. F41F3.4 col-139 33.00 6986.92 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
14. T04C12.4 act-3 31.80 6732.85 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
15. W05B2.5 col-93 31.80 6732.85 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
16. F26F12.1 col-140 29.60 6267.06 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
17. W03G11.1 col-181 29.60 6267.06 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
18. F52H3.7 lec-2 28.50 6034.16 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
19. T13F3.6 T13F3.6 27.40 5801.26
20. F38A3.1 col-81 26.30 5568.36 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
21. F54C1.7 pat-10 25.20 5335.47 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
22. Y5F2A.1 ttr-16 25.20 5335.47 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
23. C09G5.5 col-80 23.00 4869.67 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
24. C36E6.3 mlc-1 23.00 4869.67 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
25. F11G11.11 col-20 23.00 4869.67 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
26. K02F2.2 ahcy-1 23.00 4869.67 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
27. W03G11.1b 21.90 4636.78
28. ZK1193.1 col-19 21.90 4636.78 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
29. F56E10.4 rps-27 20.80 4403.88 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
30. F01G12.5 let-2 19.70 4170.98 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
31. M03F4.2 act-4 18.60 3938.08 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
32. W06H8.8 ttn-1 18.60 3938.08 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
33. F11C3.3 unc-54 17.60 3726.36 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
34. F28H1.2 cpn-3 17.60 3726.36 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
35. F31E3.5 eef-1A.1 17.60 3726.36 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
36. T07C4.5 ttr-15 17.60 3726.36 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
37. Y73B6BL.24 acp-6 17.60 3726.36 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
38. F11H8.3 col-8 16.50 3493.46 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
39. F20A1.1 F20A1.1 16.50 3493.46
40. F45E4.8 nlp-20 16.50 3493.46 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_501244]
41. F49E2.5 F49E2.5 16.50 3493.46
42. T27E9.1 ant-1.1 16.50 3493.46 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
43. W05B2.1 col-94 16.50 3493.46 COLlagen [Source:RefSeq peptide;Acc:NP_499410]
44. W05B2.6 col-92 15.40 3260.56 COLlagen [Source:RefSeq peptide;Acc:NP_499408]
45. C34F6.2 col-178 14.40 3048.84 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
46. F46H5.3 F46H5.3 14.40 3048.84 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
47. K10B3.9 mai-1 14.40 3048.84 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
48. T11B7.3 col-118 14.40 3048.84 COLlagen [Source:RefSeq peptide;Acc:NP_001122798]
49. Y105E8B.1 lev-11 14.40 3048.84 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
50. C42C1.14 rpl-34 13.30 2815.94 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
51. F08B12.4 F08B12.4 13.30 2815.94
52. T25F10.6 clik-1 13.30 2815.94 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
53. C04F12.4 rpl-14 12.30 2604.22 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
54. C34F6.3 col-179 12.30 2604.22 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
55. D1007.6 rps-10 12.30 2604.22 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
56. F07A5.7 unc-15 12.30 2604.22 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
57. F09F7.2 mlc-3 12.30 2604.22 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
58. F16B4.4 F16B4.4 12.30 2604.22
59. F37A8.4 nlp-10 12.30 2604.22 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_497795]
60. F52D10.3 ftt-2 12.30 2604.22 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
61. T04C12.5 act-2 12.30 2604.22 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
62. T19C4.7 nlp-33 12.30 2604.22 Neuropeptide-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZN4]
63. W09C5.6 rpl-31 12.30 2604.22 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
64. Y105E8A.16 rps-20 12.30 2604.22 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
65. Y48B6A.14 hmg-1.1 12.30 2604.22 HMG [Source:RefSeq peptide;Acc:NP_496970]
66. B0041.4 rpl-4 11.20 2371.32 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
67. C23H4.1 cab-1 11.20 2371.32
68. C37C3.6 mig-6 11.20 2371.32 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
69. C49F5.1 sams-1 11.20 2371.32 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
70. C53B4.5 col-119 11.20 2371.32 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
71. E04A4.7 cyc-2.1 11.20 2371.32 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
72. F33A8.3 cey-1 11.20 2371.32 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
73. F37C4.6 F37C4.6 11.20 2371.32
74. F42C5.8 rps-8 11.20 2371.32 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
75. F55D10.2 rpl-25.1 11.20 2371.32 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
76. F57B1.3 col-159 11.20 2371.32 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
77. R05G6.7 vdac-1 11.20 2371.32 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
78. T07A9.14 T07A9.14 11.20 2371.32
79. ZC434.2 rps-7 11.20 2371.32 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
80. F47B10.2 haly-1 10.20 2159.59 Histidine ammonia-lyase [Source:UniProtKB/Swiss-Prot;Acc:Q20502]
81. F53F4.13 F53F4.13 10.20 2159.59
82. F54E7.2 rps-12 10.20 2159.59 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
83. R102.2 R102.2 10.20 2159.59
84. R10E11.8 vha-1 10.20 2159.59 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
85. T05G5.6 ech-6 10.20 2159.59 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
86. T15B7.3 col-143 10.20 2159.59 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
87. T21H3.3 cmd-1 10.20 2159.59 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
88. Y82E9BR.3 Y82E9BR.3 10.20 2159.59 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
89. ZK721.2 unc-27 10.20 2159.59 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
90. C16A3.9 rps-13 9.14 1935.17 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
91. F13D12.4 alh-8 9.14 1935.17 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
92. F25H2.5 ndk-1 9.14 1935.17 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
93. F36A2.6 rps-15 9.14 1935.17 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
94. F37C12.9 rps-14 9.14 1935.17 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
95. F40F11.1 rps-11 9.14 1935.17 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
96. F54C9.5 rpl-5 9.14 1935.17 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
97. F56F3.6 ins-17 9.14 1935.17 INSulin related [Source:RefSeq peptide;Acc:NP_497911]
98. F59A7.2 F59A7.2 9.14 1935.17
99. R13A5.8 rpl-9 9.14 1935.17 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
100. RIT6P.424 9.14 1935.17
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA