C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T05A1.2

Gene ID Gene Name Reads Transcripts Annotation
T05A1.2 col-122 163233 T05A1.2 COLlagen [Source:RefSeq peptide;Acc:NP_501700]

Genes with expression patterns similar to T05A1.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T05A1.2 col-122 163233 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
2. Y77E11A.15 col-106 105434 7.844 0.959 0.982 0.991 0.982 0.981 0.983 0.976 0.990 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
3. W03G11.1 col-181 100180 7.818 0.970 0.976 0.975 0.976 0.979 0.983 0.976 0.983 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
4. F15A2.1 col-184 74319 7.79 0.960 0.968 0.985 0.968 0.966 0.987 0.980 0.976 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
5. F11H8.3 col-8 152488 7.639 0.947 0.968 0.968 0.968 0.949 0.951 0.943 0.945 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
6. C24F3.6 col-124 156254 7.564 0.968 0.943 0.902 0.943 0.958 0.948 0.956 0.946 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
7. F26F12.1 col-140 160999 7.489 0.954 0.913 0.934 0.913 0.950 0.935 0.936 0.954 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
8. R01E6.3 cah-4 42749 7.438 0.955 0.925 0.956 0.925 0.965 0.965 0.848 0.899 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
9. W05B2.5 col-93 64768 7.435 0.923 0.947 0.905 0.947 0.938 0.947 0.871 0.957 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
10. K10B3.9 mai-1 161647 7.305 0.952 0.885 0.882 0.885 0.976 0.967 0.862 0.896 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
11. C34F6.2 col-178 152954 7.296 0.952 0.914 0.925 0.914 0.807 0.899 0.939 0.946 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
12. R11A5.4 pck-2 55256 7.272 0.917 0.823 0.920 0.823 0.963 0.954 0.935 0.937 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
13. C09G5.5 col-80 59933 7.252 0.931 0.948 0.921 0.948 0.895 0.941 0.716 0.952 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
14. F38A3.1 col-81 56859 7.224 0.964 0.958 0.954 0.958 0.809 0.904 0.768 0.909 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
15. M18.1 col-129 100644 7.196 0.950 0.962 0.942 0.962 0.852 0.896 0.799 0.833 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
16. F13H8.7 upb-1 16734 7.196 0.968 0.885 0.871 0.885 0.920 0.926 0.901 0.840 UreidoPropionase Beta [Source:RefSeq peptide;Acc:NP_495261]
17. F17C8.4 ras-2 7248 7.161 0.885 0.854 0.885 0.854 0.955 0.963 0.886 0.879 R-RAS related [Source:RefSeq peptide;Acc:NP_497972]
18. F41F3.4 col-139 56412 7.111 0.915 0.966 0.966 0.966 0.800 0.903 0.751 0.844 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
19. F14F7.1 col-98 72968 7.053 0.889 0.808 0.813 0.808 0.954 0.975 0.888 0.918 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
20. Y105C5B.28 gln-3 27333 7.017 0.832 0.811 0.871 0.811 0.908 0.963 0.897 0.924 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
21. C28H8.11 tdo-2 5494 6.963 0.972 0.801 0.844 0.801 0.903 0.938 0.867 0.837 Tryptophan 2,3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q09474]
22. F55F3.3 nkb-3 19665 6.798 0.956 0.859 0.880 0.859 0.890 0.851 0.801 0.702 Probable sodium/potassium-transporting ATPase subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUY5]
23. F56B3.1 col-103 45613 6.777 0.882 0.717 0.754 0.717 0.924 0.965 0.863 0.955 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
24. W06D4.1 hgo-1 3762 6.769 0.896 0.869 0.849 0.869 0.890 0.953 0.849 0.594 Homogentisate 1,2-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9Y041]
25. K08F8.1 mak-1 14503 6.766 0.826 0.771 0.862 0.771 0.900 0.952 0.796 0.888 MAP kinase Activated protein Kinase [Source:RefSeq peptide;Acc:NP_001022239]
26. F20B6.2 vha-12 60816 6.735 0.799 0.771 0.698 0.771 0.928 0.952 0.897 0.919 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
27. C03G5.1 sdha-1 32426 6.725 0.828 0.764 0.825 0.764 0.953 0.933 0.819 0.839 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09508]
28. B0213.2 nlp-27 38894 6.682 0.967 0.893 0.832 0.893 0.892 0.865 0.474 0.866 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
29. Y43F8C.20 grsp-1 19633 6.682 0.770 0.707 0.853 0.707 0.931 0.963 0.840 0.911 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_001024238]
30. T14F9.1 vha-15 32310 6.682 0.836 0.776 0.707 0.776 0.912 0.954 0.851 0.870 Probable V-type proton ATPase subunit H 2 [Source:UniProtKB/Swiss-Prot;Acc:Q22494]
31. F27D9.5 pcca-1 35848 6.662 0.674 0.691 0.829 0.691 0.964 0.975 0.960 0.878 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
32. F41E7.8 cnc-8 15268 6.651 0.961 0.780 0.847 0.780 0.744 0.886 0.713 0.940 CaeNaCin (Caenorhabditis bacteriocin) [Source:RefSeq peptide;Acc:NP_509728]
33. T22E5.5 mup-2 65873 6.641 0.844 0.813 0.738 0.813 0.919 0.950 0.705 0.859 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
34. Y79H2A.1 brp-1 53276 6.62 0.793 0.731 0.880 0.731 0.932 0.954 0.820 0.779 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
35. K07D8.1 mup-4 15800 6.593 0.848 0.775 0.921 0.775 0.919 0.974 0.506 0.875 Transmembrane matrix receptor MUP-4 [Source:UniProtKB/Swiss-Prot;Acc:Q21281]
36. F52E4.1 pccb-1 44388 6.588 0.699 0.698 0.782 0.698 0.953 0.952 0.953 0.853 Propionyl Coenzyme A Carboxylase Beta subunit [Source:RefSeq peptide;Acc:NP_741743]
37. H27C11.1 nhr-97 12476 6.586 0.843 0.827 0.716 0.827 0.950 0.929 0.714 0.780 Nuclear hormone receptor family member nhr-97 [Source:UniProtKB/Swiss-Prot;Acc:Q9BJK5]
38. F35B12.7 nlp-24 9351 6.574 0.984 0.781 0.854 0.781 0.848 0.896 0.548 0.882 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_505946]
39. F08B6.4 unc-87 108779 6.571 0.891 0.795 0.723 0.795 0.930 0.957 0.692 0.788 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
40. K07A3.1 fbp-1 13261 6.565 0.783 0.628 0.743 0.628 0.950 0.933 0.954 0.946 Fructose-1,6-BiPhosphatase [Source:RefSeq peptide;Acc:NP_491004]
41. Y55H10A.1 vha-19 38495 6.547 0.855 0.702 0.692 0.702 0.931 0.953 0.792 0.920 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_500332]
42. T08A9.11 ttr-59 5115 6.533 0.968 0.800 0.909 0.800 0.756 0.936 0.519 0.845 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_741833]
43. Y66A7A.6 gly-8 5963 6.527 0.953 0.756 0.638 0.756 0.883 0.913 0.768 0.860 Probable N-acetylgalactosaminyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:O45293]
44. T13C5.5 bca-1 8361 6.483 0.805 0.706 0.799 0.706 0.908 0.957 0.690 0.912 Beta carbonic anhydrase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22460]
45. T28B4.3 ttr-6 9497 6.478 0.850 0.704 0.750 0.704 0.901 0.950 0.852 0.767 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_509110]
46. C30F8.2 vha-16 23569 6.431 0.841 0.666 0.622 0.666 0.935 0.954 0.876 0.871 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_491515]
47. C26B2.3 nhr-31 8367 6.419 0.859 0.775 0.743 0.775 0.879 0.954 0.678 0.756 Nuclear hormone receptor family member nhr-31 [Source:UniProtKB/Swiss-Prot;Acc:Q18192]
48. C14H10.2 C14H10.2 983 6.417 0.901 0.544 0.904 0.544 0.968 0.946 0.811 0.799
49. C34F6.8 idh-2 2221 6.371 0.759 0.714 0.711 0.714 0.863 0.955 0.769 0.886 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_509875]
50. T01H3.1 vha-4 57474 6.367 0.787 0.670 0.643 0.670 0.913 0.956 0.849 0.879 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_495659]
51. C04F5.7 ugt-63 3693 6.351 0.956 0.838 0.687 0.838 0.694 0.856 0.588 0.894 UDP-GlucuronosylTransferase [Source:RefSeq peptide;Acc:NP_504369]
52. K04H4.1 emb-9 32527 6.291 0.824 0.709 0.563 0.709 0.951 0.918 0.809 0.808 Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]
53. R03E9.1 mdl-1 15351 6.279 0.748 0.706 0.707 0.706 0.924 0.957 0.796 0.735 MAD-Like [Source:RefSeq peptide;Acc:NP_509136]
54. F27D9.6 dhs-29 1921 6.197 0.915 0.586 0.808 0.586 0.904 0.954 0.790 0.654 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_509294]
55. F01F1.12 aldo-2 42507 5.992 0.631 0.526 0.595 0.526 0.950 0.940 0.910 0.914 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
56. H28G03.2 H28G03.2 2556 5.98 0.770 0.418 0.742 0.418 0.937 0.983 0.854 0.858
57. T04C12.3 T04C12.3 9583 5.917 0.924 0.312 0.956 0.312 0.895 0.937 0.694 0.887
58. F49C12.14 F49C12.14 795 5.758 0.757 0.504 0.618 0.504 0.899 0.956 0.680 0.840
59. T04F8.9 T04F8.9 0 5.522 0.975 - 0.941 - 0.927 0.971 0.772 0.936
60. C54D10.13 C54D10.13 0 5.502 0.959 - 0.822 - 0.886 0.960 0.930 0.945
61. K08F11.1 K08F11.1 307 5.449 0.950 - 0.850 - 0.850 0.870 0.967 0.962
62. F11E6.4 F11E6.4 0 5.387 0.955 - 0.958 - 0.923 0.911 0.826 0.814
63. T13F3.7 T13F3.7 397 5.378 0.963 - 0.968 - 0.797 0.908 0.856 0.886
64. W05B2.1 col-94 30273 5.353 0.915 - 0.859 - 0.917 0.954 0.782 0.926 COLlagen [Source:RefSeq peptide;Acc:NP_499410]
65. C46F4.3 C46F4.3 0 5.347 0.822 - 0.885 - 0.960 0.935 0.887 0.858
66. AC8.2 AC8.2 0 5.334 0.953 - 0.913 - 0.881 0.936 0.826 0.825
67. C05C8.8 C05C8.8 0 5.301 0.879 - 0.868 - 0.918 0.950 0.906 0.780
68. Y70C5A.2 Y70C5A.2 0 5.26 0.879 - 0.643 - 0.928 0.979 0.871 0.960
69. Y105C5B.7 Y105C5B.7 0 5.216 0.951 - 0.871 - 0.823 0.939 0.807 0.825
70. F46H5.4 F46H5.4 0 5.135 0.950 - 0.848 - 0.895 0.866 0.767 0.809
71. ZK1058.1 mmcm-1 15851 5.099 0.424 0.384 0.364 0.384 0.962 0.941 0.871 0.769 Probable methylmalonyl-CoA mutase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q23381]
72. C32D5.9 lgg-1 49139 5.072 0.467 0.331 0.327 0.331 0.959 0.942 0.855 0.860
73. F41E7.4 fip-5 4218 5.052 0.954 - 0.879 - 0.812 0.876 0.692 0.839 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_509726]
74. M88.6 pan-1 4450 4.928 0.665 0.405 0.636 0.405 0.883 0.961 0.536 0.437 P-granule-associated novel protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3A0]
75. F32H2.5 fasn-1 16352 4.927 0.476 0.354 0.295 0.354 0.859 0.952 0.742 0.895 Fatty Acid SyNthase [Source:RefSeq peptide;Acc:NP_492417]
76. F22F4.5 F22F4.5 442 4.872 0.775 - 0.754 - 0.948 0.965 0.712 0.718
77. F16B4.5 F16B4.5 0 4.792 0.979 - 0.939 - 0.913 0.926 0.363 0.672
78. ZK632.10 ZK632.10 28231 4.77 0.456 0.189 0.364 0.189 0.957 0.960 0.762 0.893 UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
79. T21E3.2 T21E3.2 394 4.749 0.922 - 0.773 - 0.795 0.952 0.774 0.533
80. R05F9.7 R05F9.7 0 4.593 0.565 - 0.313 - 0.947 0.952 0.877 0.939
81. F43C11.3 decr-1.1 1293 4.574 0.973 0.703 0.691 0.703 0.674 0.830 - - DiEnoyl-CoA Reductase, mitochondria [Source:RefSeq peptide;Acc:NP_494251]
82. C48E7.10 spp-15 5610 4.518 0.952 - 0.652 - 0.708 0.793 0.685 0.728 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_491803]
83. C45E5.6 nhr-46 4653 4.415 0.235 0.367 0.446 0.367 0.865 0.954 0.655 0.526 Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001293738]
84. F36H9.5 F36H9.5 0 4.375 0.951 - - - 0.858 0.889 0.825 0.852
85. T22F3.7 T22F3.7 0 4.302 0.395 - 0.217 - 0.968 0.969 0.834 0.919
86. C14F5.5 sem-5 4488 4.256 0.235 0.396 0.242 0.396 0.832 0.968 0.402 0.785 Sex muscle abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P29355]
87. M02B1.3 M02B1.3 15234 4.229 - 0.224 0.546 0.224 0.864 0.953 0.647 0.771
88. C33D9.5 C33D9.5 0 3.751 - - 0.888 - 0.839 0.962 0.354 0.708
89. C01B12.2 gmeb-1 2053 3.729 0.139 0.319 0.408 0.319 0.782 0.950 0.195 0.617 GMEB (Glucocorticoid Modulatory Element Binding protein) transcriptional regulator homolog [Source:RefSeq peptide;Acc:NP_493634]
90. T27E4.8 hsp-16.1 43612 3.677 - - - - 0.932 0.953 0.876 0.916 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
91. C15A11.6 col-62 3133 3.656 0.957 0.671 0.758 0.671 - - 0.599 - COLlagen [Source:RefSeq peptide;Acc:NP_492091]
92. C25E10.7 C25E10.7 0 2.378 - - - - 0.743 0.964 0.364 0.307
93. K08D12.6 K08D12.6 334978 1.918 - 0.959 - 0.959 - - - -
94. T04F8.8 T04F8.8 41412 1.904 - 0.952 - 0.952 - - - -
95. C15A11.5 col-7 2258 1.765 0.954 - 0.811 - - - - - Cuticle collagen 7 [Source:UniProtKB/Swiss-Prot;Acc:P18832]

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA