C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F13D12.4

Gene ID Gene Name Reads Transcripts Annotation
F13D12.4 alh-8 106503 F13D12.4a.1, F13D12.4a.2, F13D12.4a.3, F13D12.4b Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]

Genes with expression patterns similar to F13D12.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F13D12.4 alh-8 106503 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
2. T05G5.6 ech-6 70806 7.572 0.990 0.958 0.929 0.958 0.946 0.963 0.864 0.964 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
3. K04D7.3 gta-1 20812 7.412 0.964 0.950 0.950 0.950 0.855 0.929 0.900 0.914 Probable 4-aminobutyrate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q21217]
4. K10B3.9 mai-1 161647 7.387 0.955 0.936 0.891 0.936 0.917 0.942 0.925 0.885 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
5. F46F11.5 vha-10 61918 7.368 0.958 0.902 0.917 0.902 0.916 0.957 0.868 0.948 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
6. F55D10.2 rpl-25.1 95984 7.344 0.952 0.931 0.964 0.931 0.910 0.920 0.896 0.840 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
7. C17H12.14 vha-8 74709 7.318 0.948 0.898 0.909 0.898 0.915 0.963 0.846 0.941 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
8. VW06B3R.1 ucr-2.1 23178 7.294 0.932 0.970 0.905 0.970 0.906 0.899 0.878 0.834 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_510012]
9. Y55H10A.1 vha-19 38495 7.294 0.953 0.898 0.887 0.898 0.911 0.960 0.847 0.940 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_500332]
10. W04D2.1 atn-1 22582 7.293 0.958 0.941 0.706 0.941 0.960 0.959 0.937 0.891 AcTiniN [Source:RefSeq peptide;Acc:NP_001256424]
11. F59B8.2 idh-1 41194 7.287 0.929 0.893 0.905 0.893 0.918 0.958 0.836 0.955 Isocitrate DeHydrogenase [Source:RefSeq peptide;Acc:NP_001255394]
12. R03E1.2 vha-20 25289 7.269 0.960 0.903 0.904 0.903 0.880 0.930 0.850 0.939 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_510360]
13. Y38F2AL.3 vha-11 34691 7.253 0.924 0.919 0.914 0.919 0.905 0.953 0.774 0.945 V-type proton ATPase subunit C [Source:UniProtKB/Swiss-Prot;Acc:Q9XXU9]
14. R11A5.4 pck-2 55256 7.251 0.954 0.891 0.828 0.891 0.903 0.936 0.905 0.943 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
15. F54C9.1 iff-2 63995 7.225 0.918 0.931 0.951 0.931 0.892 0.926 0.864 0.812 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
16. K09A9.5 gas-1 21971 7.21 0.924 0.966 0.890 0.966 0.855 0.919 0.878 0.812 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873]
17. F02E8.1 asb-2 46847 7.208 0.963 0.935 0.930 0.935 0.863 0.881 0.859 0.842 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_508770]
18. C30F8.2 vha-16 23569 7.208 0.928 0.884 0.893 0.884 0.883 0.956 0.866 0.914 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_491515]
19. C18A11.7 dim-1 110263 7.192 0.958 0.882 0.772 0.882 0.948 0.949 0.935 0.866 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
20. T25F10.6 clik-1 175948 7.187 0.957 0.861 0.897 0.861 0.921 0.912 0.936 0.842 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
21. F26F12.1 col-140 160999 7.182 0.959 0.892 0.877 0.892 0.905 0.914 0.827 0.916 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
22. C09G5.5 col-80 59933 7.181 0.956 0.911 0.894 0.911 0.895 0.899 0.812 0.903 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
23. Y56A3A.32 wah-1 13994 7.153 0.922 0.871 0.835 0.871 0.915 0.975 0.860 0.904 Worm AIF (apoptosis inducing factor) Homolog [Source:RefSeq peptide;Acc:NP_499564]
24. F49C12.13 vha-17 47854 7.15 0.928 0.837 0.845 0.837 0.930 0.950 0.879 0.944 V-type proton ATPase subunit e [Source:UniProtKB/Swiss-Prot;Acc:Q20591]
25. T22E5.5 mup-2 65873 7.135 0.942 0.870 0.842 0.870 0.926 0.959 0.887 0.839 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
26. T01H3.1 vha-4 57474 7.119 0.927 0.880 0.866 0.880 0.873 0.950 0.849 0.894 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_495659]
27. F08B6.4 unc-87 108779 7.117 0.955 0.845 0.807 0.845 0.953 0.961 0.914 0.837 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
28. F54C1.7 pat-10 205614 7.115 0.951 0.840 0.836 0.840 0.936 0.953 0.943 0.816 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
29. C24F3.6 col-124 156254 7.097 0.954 0.894 0.886 0.894 0.864 0.891 0.830 0.884 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
30. Y56A3A.3 mif-1 8994 7.061 0.873 0.863 0.806 0.863 0.971 0.965 0.881 0.839 MIF (Macrophage migration Inhibitory Factor) related [Source:RefSeq peptide;Acc:NP_499536]
31. T02G5.8 kat-1 14385 7.031 0.914 0.897 0.873 0.897 0.861 0.962 0.738 0.889 Acetyl-CoA acetyltransferase homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22100]
32. F07D10.1 rpl-11.2 64869 7.017 0.967 0.907 0.952 0.907 0.826 0.855 0.798 0.805 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
33. R01E6.3 cah-4 42749 7.017 0.895 0.825 0.748 0.825 0.936 0.952 0.933 0.903 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
34. F53H10.2 saeg-1 16346 7.011 0.875 0.846 0.855 0.846 0.943 0.964 0.852 0.830 Suppressor of Activated EGL-4 [Source:RefSeq peptide;Acc:NP_505769]
35. W01A11.4 lec-10 29941 7.005 0.951 0.897 0.908 0.897 0.842 0.856 0.767 0.887 Galectin [Source:RefSeq peptide;Acc:NP_504647]
36. F02A9.2 far-1 119216 6.999 0.940 0.801 0.735 0.801 0.964 0.906 0.904 0.948 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
37. C34F6.2 col-178 152954 6.982 0.956 0.880 0.860 0.880 0.772 0.895 0.819 0.920 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
38. F53A9.10 tnt-2 113410 6.957 0.936 0.811 0.807 0.811 0.924 0.952 0.907 0.809 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
39. C34F6.3 col-179 100364 6.956 0.965 0.881 0.875 0.881 0.871 0.873 0.728 0.882 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
40. T14G12.3 tag-18 22633 6.95 0.919 0.856 0.830 0.856 0.873 0.961 0.831 0.824
41. C46G7.4 pqn-22 11560 6.92 0.889 0.867 0.697 0.867 0.945 0.961 0.842 0.852 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_500907]
42. F54D11.1 pmt-2 22122 6.897 0.950 0.866 0.919 0.866 0.812 0.877 0.804 0.803 Phosphoethanolamine MethylTransferase [Source:RefSeq peptide;Acc:NP_504248]
43. T13C5.5 bca-1 8361 6.865 0.879 0.808 0.882 0.808 0.877 0.955 0.775 0.881 Beta carbonic anhydrase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22460]
44. F09F7.5 F09F7.5 1499 6.859 0.915 0.782 0.951 0.782 0.830 0.919 0.823 0.857
45. K02F2.2 ahcy-1 187769 6.842 0.961 0.912 0.954 0.912 0.673 0.864 0.708 0.858 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
46. T07C4.5 ttr-15 76808 6.84 0.829 0.766 0.883 0.766 0.911 0.971 0.807 0.907 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
47. F01F1.12 aldo-2 42507 6.828 0.817 0.752 0.782 0.752 0.927 0.960 0.896 0.942 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
48. Y37D8A.3 Y37D8A.3 667 6.816 0.932 0.740 0.765 0.740 0.923 0.952 0.856 0.908
49. C44E4.6 acbp-1 18619 6.811 0.957 0.839 0.901 0.839 0.852 0.884 0.680 0.859 Acyl-CoA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01805]
50. F46E10.10 mdh-1 38551 6.808 0.807 0.748 0.732 0.748 0.957 0.972 0.903 0.941 Malate dehydrogenase [Source:RefSeq peptide;Acc:NP_504656]
51. F54F2.1 pat-2 10101 6.793 0.828 0.892 0.761 0.892 0.873 0.958 0.802 0.787 Integrin alpha pat-2 [Source:UniProtKB/Swiss-Prot;Acc:P34446]
52. Y17G7B.7 tpi-1 19678 6.788 0.845 0.762 0.789 0.762 0.866 0.979 0.889 0.896 Triosephosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q10657]
53. F27D9.5 pcca-1 35848 6.77 0.718 0.810 0.720 0.810 0.943 0.971 0.867 0.931 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
54. ZC449.3 sek-3 5647 6.767 0.752 0.804 0.807 0.804 0.923 0.957 0.876 0.844 SAPK/ERK kinase [Source:RefSeq peptide;Acc:NP_741777]
55. M03F4.2 act-4 354219 6.743 0.860 0.860 0.856 0.860 0.680 0.951 0.902 0.774 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
56. C50F4.7 his-37 6537 6.719 0.923 0.695 0.786 0.695 0.935 0.953 0.797 0.935 Histone H4 [Source:UniProtKB/Swiss-Prot;Acc:P62784]
57. Y38F1A.9 oig-2 10083 6.703 0.911 0.838 0.652 0.838 0.883 0.954 0.840 0.787 One IG domain [Source:RefSeq peptide;Acc:NP_496767]
58. T21B10.2 enol-1 72318 6.694 0.786 0.761 0.734 0.761 0.953 0.947 0.846 0.906 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
59. F55A8.2 egl-4 28504 6.663 0.817 0.719 0.756 0.719 0.929 0.979 0.845 0.899 cGMP-dependent protein kinase egl-4 [Source:UniProtKB/Swiss-Prot;Acc:O76360]
60. F13D12.2 ldh-1 23786 6.66 0.860 0.704 0.760 0.704 0.966 0.939 0.848 0.879 L-lactate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27888]
61. F14D12.2 unc-97 9701 6.659 0.831 0.824 0.797 0.824 0.855 0.971 0.735 0.822 LIM domain-containing protein unc-97 [Source:UniProtKB/Swiss-Prot;Acc:P50464]
62. W03F8.5 lam-1 14965 6.633 0.857 0.748 0.798 0.748 0.925 0.972 0.769 0.816 LAMinin related. See also lmb- [Source:RefSeq peptide;Acc:NP_500734]
63. F21F8.3 asp-5 41543 6.625 0.957 0.872 0.904 0.872 0.812 0.793 0.641 0.774 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505135]
64. H28G03.2 H28G03.2 2556 6.611 0.869 0.654 0.843 0.654 0.889 0.972 0.833 0.897
65. F57B10.3 ipgm-1 32965 6.609 0.814 0.748 0.694 0.748 0.925 0.972 0.798 0.910 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Source:UniProtKB/Swiss-Prot;Acc:G5EFZ1]
66. F58G1.4 dct-18 29213 6.572 0.952 0.897 0.899 0.897 0.802 0.807 0.632 0.686 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_496755]
67. C24A3.6 twk-18 7204 6.572 0.768 0.872 0.640 0.872 0.919 0.950 0.828 0.723 TWiK family of potassium channels protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q18120]
68. ZK1151.1 vab-10 25100 6.562 0.853 0.776 0.832 0.776 0.932 0.951 0.591 0.851 Uncharacterized protein; VAB-10B protein [Source:UniProtKB/TrEMBL;Acc:G5EFM4]
69. M03B6.2 mct-3 12177 6.551 0.955 0.765 0.794 0.765 0.860 0.881 0.702 0.829 MonoCarboxylate Transporter family [Source:RefSeq peptide;Acc:NP_510308]
70. F07C4.7 grsp-4 3454 6.542 0.962 0.739 0.881 0.739 0.805 0.870 0.689 0.857 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_504970]
71. F42G4.3 zyx-1 50908 6.525 0.741 0.683 0.842 0.683 0.936 0.967 0.825 0.848 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
72. ZK484.3 ZK484.3 9359 6.518 0.911 0.500 0.888 0.500 0.901 0.964 0.924 0.930
73. F21F8.7 asp-6 83612 6.491 0.959 0.907 0.869 0.907 0.729 0.810 0.645 0.665 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
74. B0213.2 nlp-27 38894 6.427 0.950 0.677 0.852 0.677 0.881 0.850 0.654 0.886 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
75. K11D9.2 sca-1 71133 6.409 0.786 0.715 0.636 0.715 0.916 0.957 0.828 0.856 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
76. F53F10.4 unc-108 41213 6.277 0.754 0.610 0.638 0.610 0.924 0.964 0.848 0.929 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
77. T05A12.2 tre-2 7607 6.236 0.825 0.830 0.859 0.830 0.629 0.966 0.667 0.630 Trehalase [Source:RefSeq peptide;Acc:NP_001293773]
78. F49C12.14 F49C12.14 795 6.23 0.892 0.430 0.781 0.430 0.944 0.971 0.838 0.944
79. W09H1.6 lec-1 22667 6.217 0.675 0.677 0.784 0.677 0.816 0.955 0.793 0.840 32 kDa beta-galactoside-binding lectin [Source:UniProtKB/Swiss-Prot;Acc:P36573]
80. C04F6.4 unc-78 3249 6.194 0.755 0.732 0.564 0.732 0.854 0.962 0.792 0.803 Actin-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q11176]
81. Y57G11C.10 gdi-1 38397 6.147 0.756 0.616 0.648 0.616 0.907 0.960 0.758 0.886 GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
82. Y87G2A.8 gpi-1 18323 6.122 0.541 0.694 0.629 0.694 0.923 0.961 0.812 0.868 Glucose-6-phosphate isomerase [Source:RefSeq peptide;Acc:NP_001021838]
83. T27A3.1 trak-1 7779 6.086 0.525 0.785 0.596 0.785 0.824 0.957 0.824 0.790 TRAK1 and TRAK2 related [Source:RefSeq peptide;Acc:NP_740861]
84. ZK1067.2 ZK1067.2 3161 6.073 0.880 0.455 0.770 0.455 0.942 0.967 0.770 0.834
85. M88.6 pan-1 4450 5.897 0.815 0.540 0.744 0.540 0.950 0.947 0.770 0.591 P-granule-associated novel protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3A0]
86. ZK632.10 ZK632.10 28231 5.868 0.655 0.497 0.584 0.497 0.900 0.950 0.883 0.902 UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
87. F42A8.3 F42A8.3 1906 5.843 0.913 0.389 0.924 0.389 0.950 0.904 0.611 0.763
88. K08E4.2 K08E4.2 287 5.707 0.616 0.486 0.426 0.486 0.922 0.972 0.866 0.933
89. B0379.2 B0379.2 3303 5.662 0.906 0.185 0.818 0.185 0.928 0.956 0.856 0.828
90. D2092.6 D2092.6 1738 5.613 0.918 0.146 0.794 0.146 0.953 0.964 0.866 0.826
91. ZK593.6 lgg-2 19780 5.496 0.595 0.451 0.384 0.451 0.928 0.974 0.843 0.870
92. Y49A3A.4 Y49A3A.4 0 5.493 0.954 - 0.899 - 0.886 0.959 0.868 0.927
93. E04F6.9 E04F6.9 10910 5.492 0.955 0.408 0.732 0.408 0.814 0.823 0.567 0.785
94. Y38F1A.7 Y38F1A.7 843 5.386 0.960 - 0.942 - 0.881 0.874 0.832 0.897
95. H37A05.2 H37A05.2 0 5.357 0.898 - 0.884 - 0.867 0.951 0.916 0.841
96. Y79H2A.2 Y79H2A.2 469 5.356 0.836 0.005 0.762 0.005 0.907 0.969 0.933 0.939 Putative uncharacterized protein C51G7.2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECK2]
97. R02F2.4 R02F2.4 2756 5.35 0.663 0.447 0.486 0.447 0.959 0.877 0.640 0.831
98. B0250.7 B0250.7 0 5.229 0.835 - 0.831 - 0.880 0.961 0.794 0.928
99. VH15N14R.1 VH15N14R.1 104 5.146 0.952 - 0.815 - 0.869 0.922 0.788 0.800
100. C12D12.3 C12D12.3 0 5.133 0.954 - 0.921 - 0.834 0.817 0.739 0.868

There are 8 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA