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Experiment herm1, section s25.

Sample reads: 360,770. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. C04F12.4 rpl-14 1420.00 3936.05 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
2. F54E7.2 rps-12 1420.00 3936.05 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. W09C5.6 rpl-31 1420.00 3936.05 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
4. D1007.6 rps-10 1240.00 3437.11 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
5. E04A4.7 cyc-2.1 1140.00 3159.93 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
6. F52B5.6 rpl-25.2 1140.00 3159.93 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
7. F42C5.8 rps-8 1060.00 2938.18 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
8. F56E10.4 rps-27 1060.00 2938.18 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
9. K02B2.5 rps-25 1060.00 2938.18 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
10. RIT1P.688 1060.00 2938.18
11. Y24D9A.4 rpl-7A 1060.00 2938.18 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
12. ZC434.2 rps-7 1060.00 2938.18 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
13. C42C1.14 rpl-34 1010.00 2799.59 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
14. C49H3.11 rps-2 1010.00 2799.59 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
15. F13B10.2 rpl-3 1010.00 2799.59 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
16. T07A9.14 T07A9.14 1010.00 2799.59
17. Y71F9AL.13 rpl-1 1010.00 2799.59 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
18. F31E3.5 eef-1A.1 959.00 2658.22 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
19. F39B2.6 rps-26 959.00 2658.22 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
20. F37C12.9 rps-14 920.00 2550.12 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
21. F40F11.1 rps-11 920.00 2550.12 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
22. Y105E8A.16 rps-20 920.00 2550.12 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
23. F10B5.1 rpl-10 885.00 2453.10 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
24. F25H2.5 ndk-1 885.00 2453.10 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
25. R13A5.8 rpl-9 885.00 2453.10 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
26. Y48B6A.2 rpl-43 885.00 2453.10 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
27. B0041.4 rpl-4 855.00 2369.95 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
28. F28C6.7 rpl-26 855.00 2369.95 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
29. C14B9.7 rpl-21 828.00 2295.11 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
30. Y18D10A.17 car-1 828.00 2295.11 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
31. Y71A12B.1 rps-6 828.00 2295.11 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
32. ZK652.4 rpl-35 828.00 2295.11 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
33. C16A3.9 rps-13 804.00 2228.58 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
34. F37C12.4 rpl-36 804.00 2228.58 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
35. F54C9.5 rpl-5 804.00 2228.58 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
36. F02A9.3 far-2 782.00 2167.60 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
37. F36A2.6 rps-15 782.00 2167.60 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
38. M01F1.2 rpl-16 782.00 2167.60 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
39. R09B3.3 R09B3.3 782.00 2167.60
40. T01C3.6 rps-16 782.00 2167.60 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
41. T22F3.4 rpl-11.1 782.00 2167.60 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
42. Y82E9BR.3 Y82E9BR.3 782.00 2167.60 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
43. F28D1.7 rps-23 761.00 2109.39 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
44. F40F8.10 rps-9 761.00 2109.39 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
45. C06B8.8 rpl-38 743.00 2059.50 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
46. F10E7.7 rpl-33 743.00 2059.50 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
47. ZK1010.1 ubq-2 743.00 2059.50 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
48. B0393.1 rps-0 725.00 2009.60 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
49. T27E9.1 ant-1.1 725.00 2009.60 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
50. B0250.1 rpl-2 708.00 1962.48 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
51. R05G6.7 vdac-1 708.00 1962.48 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
52. ZK354.5 msp-51 708.00 1962.48 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
53. C37A2.7 C37A2.7 693.00 1920.90 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
54. T05F1.3 rps-19 693.00 1920.90 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
55. B0513.3 rpl-29 678.00 1879.33 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
56. C26F1.4 rps-30 678.00 1879.33 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
57. F56F3.5 rps-1 678.00 1879.33 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
58. R151.3 rpl-6 678.00 1879.33 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
59. T05G5.10 iff-1 678.00 1879.33 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
60. Y45F10D.12 rpl-18 678.00 1879.33 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
61. T05E11.1 rps-5 664.00 1840.52 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
62. Y75B12B.2 cyn-7 664.00 1840.52 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
63. C07H6.5 cgh-1 651.00 1804.49 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
64. C09H10.2 rpl-41 651.00 1804.49 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
65. C23G10.3 rps-3 651.00 1804.49 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
66. D1007.12 rpl-24.1 651.00 1804.49 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
67. F25H2.10 rla-0 651.00 1804.49 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
68. K11H12.2 rpl-15 651.00 1804.49 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
69. Y57G11C.16 rps-18 651.00 1804.49 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
70. F53G12.10 rpl-7 639.00 1771.22 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
71. T24B8.1 rpl-32 639.00 1771.22 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
72. R13H9.4 msp-53 627.00 1737.96 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
73. F53A3.3 rps-22 616.00 1707.47 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
74. W01D2.1 W01D2.1 605.00 1676.98 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
75. T23G11.3 gld-1 594.00 1646.49 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
76. Y37E3.8 Y37E3.8 594.00 1646.49
77. Y48B6A.14 hmg-1.1 594.00 1646.49 HMG [Source:RefSeq peptide;Acc:NP_496970]
78. ZK354.11 msp-59 594.00 1646.49 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
79. D2096.8 nap-1 584.00 1618.77 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
80. T04C12.6 act-1 584.00 1618.77 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
81. Y43B11AR.4 rps-4 584.00 1618.77 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
82. ZK354.1 msp-65 584.00 1618.77 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
83. F46F11.2 cey-2 575.00 1593.82 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
84. T04C12.5 act-2 575.00 1593.82 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
85. Y37E3.7 rla-1 575.00 1593.82 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
86. Y62E10A.1 rla-2 575.00 1593.82 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
87. F26D10.3 hsp-1 565.00 1566.10 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
88. K08D12.3 K08D12.3 565.00 1566.10
89. C27A2.2 rpl-22 556.00 1541.16 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
90. C53H9.1 rpl-27 556.00 1541.16 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
91. R05F9.12 aagr-2 556.00 1541.16 Acid Alpha Glucosidase Relate [Source:RefSeq peptide;Acc:NP_494897]
92. R13H9.2 msp-57 556.00 1541.16 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
93. Y48G8AL.8 rpl-17 556.00 1541.16 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
94. C26F1.9 rpl-39 548.00 1518.98 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
95. F37C12.11 rps-21 548.00 1518.98 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
96. Y65B4BR.5 icd-2 548.00 1518.98 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
97. C47E8.11 C47E8.11 539.00 1494.04
98. C56C10.8 icd-1 531.00 1471.86 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
99. C32E8.2 rpl-13 523.00 1449.69 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
100. C44B12.5 perm-4 523.00 1449.69 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA