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Experiment herm1, section s21.

Sample reads: 172,919. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 664.00 3839.94 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F43D9.4 sip-1 664.00 3839.94 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
3. F54E7.2 rps-12 616.00 3562.35 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
4. F25H2.5 ndk-1 575.00 3325.25 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
5. D1007.6 rps-10 531.00 3070.80 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
6. F42C5.8 rps-8 523.00 3024.53 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
7. C04F12.4 rpl-14 501.00 2897.30 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
8. C42C1.14 rpl-34 494.00 2856.82 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
9. F40F11.1 rps-11 494.00 2856.82 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
10. W09C5.6 rpl-31 474.00 2741.16 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
11. Y24D9A.4 rpl-7A 474.00 2741.16 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
12. Y82E9BR.3 Y82E9BR.3 474.00 2741.16 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
13. B0280.5 cpg-2 468.00 2706.46 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
14. F13B10.2 rpl-3 456.00 2637.07 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
15. T27E9.1 ant-1.1 450.00 2602.37 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
16. E04A4.7 cyc-2.1 444.00 2567.67 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
17. RIT1P.688 444.00 2567.67
18. ZC434.2 rps-7 433.00 2504.06 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
19. B0041.4 rpl-4 428.00 2475.14 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
20. C49H3.11 rps-2 428.00 2475.14 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
21. F52B5.6 rpl-25.2 428.00 2475.14 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
22. F52E1.1 pos-1 417.00 2411.53 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
23. T07A9.14 T07A9.14 412.00 2382.61
24. Y71F9AL.13 rpl-1 412.00 2382.61 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
25. C25A1.8 clec-87 402.00 2324.78 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
26. Y105E8A.16 rps-20 402.00 2324.78 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
27. R13A5.8 rpl-9 393.00 2272.74 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
28. ZC404.8 spn-4 388.00 2243.82 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
29. F36A2.6 rps-15 384.00 2220.69 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
30. F40F8.10 rps-9 379.00 2191.77 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
31. C06B8.8 rpl-38 375.00 2168.64 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
32. F37C12.9 rps-14 371.00 2145.51 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
33. R09B3.3 R09B3.3 371.00 2145.51
34. T06E6.2 cyb-3 371.00 2145.51 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
35. F56E10.4 rps-27 366.00 2116.59 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
36. C14B9.7 rpl-21 362.00 2093.46 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
37. F02A9.3 far-2 362.00 2093.46 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
38. F39B2.6 rps-26 358.00 2070.33 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
39. Y71A12B.1 rps-6 358.00 2070.33 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
40. F28C6.7 rpl-26 350.00 2024.06 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
41. ZK652.4 rpl-35 350.00 2024.06 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
42. C09H10.2 rpl-41 342.00 1977.80 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
43. Y48B6A.2 rpl-43 342.00 1977.80 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
44. H02I12.1 cbd-1 339.00 1960.45 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
45. C07G2.1 cpg-1 335.00 1937.32 Chondroitin proteoglycan 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17802]
46. C26F1.4 rps-30 331.00 1914.19 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
47. R05G6.7 vdac-1 331.00 1914.19 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
48. F10B5.1 rpl-10 324.00 1873.71 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
49. F54C9.5 rpl-5 324.00 1873.71 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
50. B0393.1 rps-0 321.00 1856.36 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
51. K02B2.5 rps-25 321.00 1856.36 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
52. Y48B6A.14 hmg-1.1 321.00 1856.36 HMG [Source:RefSeq peptide;Acc:NP_496970]
53. T04C12.4 act-3 317.00 1833.22 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
54. B0250.1 rpl-2 307.00 1775.39 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
55. T04C12.5 act-2 307.00 1775.39 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
56. F56F3.5 rps-1 304.00 1758.04 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
57. T05G5.10 iff-1 304.00 1758.04 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
58. C28D4.3 gln-6 300.00 1734.91 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_501733]
59. T04C12.6 act-1 297.00 1717.56 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
60. T05E11.1 rps-5 297.00 1717.56 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
61. Y45F10D.12 rpl-18 294.00 1700.21 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
62. ZK1010.1 ubq-2 294.00 1700.21 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
63. F37C12.4 rpl-36 291.00 1682.87 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
64. T05F1.3 rps-19 291.00 1682.87 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
65. W02A2.7 mex-5 291.00 1682.87 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
66. F10E7.7 rpl-33 288.00 1665.52 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
67. F28D1.7 rps-23 288.00 1665.52 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
68. T01C3.6 rps-16 288.00 1665.52 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
69. C37A2.7 C37A2.7 285.00 1648.17 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
70. F53G12.5 mex-3 285.00 1648.17 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
71. R151.3 rpl-6 285.00 1648.17 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
72. C16A3.9 rps-13 282.00 1630.82 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
73. ZC513.6 oma-2 282.00 1630.82
74. R08C7.3 htz-1 279.00 1613.47 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
75. F53A3.3 rps-22 276.00 1596.12 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
76. C56C10.8 icd-1 270.00 1561.42 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
77. K11H12.2 rpl-15 270.00 1561.42 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
78. Y18D10A.17 car-1 270.00 1561.42 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
79. M7.1 let-70 267.00 1544.07 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
80. T22F3.4 rpl-11.1 267.00 1544.07 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
81. T24B8.1 rpl-32 256.00 1480.46 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
82. M117.2 par-5 251.00 1451.54 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
83. B0513.3 rpl-29 248.00 1434.19 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
84. M01F1.2 rpl-16 248.00 1434.19 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
85. W05F2.3 W05F2.3 248.00 1434.19
86. Y37E3.8 Y37E3.8 245.00 1416.85
87. F54C9.8 puf-5 243.00 1405.28 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
88. Y75B12B.2 cyn-7 238.00 1376.36 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
89. Y43B11AR.4 rps-4 235.00 1359.01 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
90. C23G10.3 rps-3 233.00 1347.45 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
91. F25H2.10 rla-0 233.00 1347.45 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
92. C47E8.11 C47E8.11 230.00 1330.10
93. Y57G11C.16 rps-18 230.00 1330.10 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
94. Y65B4BR.5 icd-2 230.00 1330.10 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
95. C53H9.1 rpl-27 225.00 1301.18 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
96. F53G12.10 rpl-7 225.00 1301.18 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
97. D1007.12 rpl-24.1 223.00 1289.62 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
98. Y37E3.7 rla-1 223.00 1289.62 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
99. Y48G8AL.8 rpl-17 223.00 1289.62 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
100. K08D12.3 K08D12.3 216.00 1249.14
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA