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Experiment herm4, region R8.

Sample reads: 977,912. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 3814.68 3900.84 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. T27E9.1 ant-1.1 3527.49 3607.17 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
3. F59D8.2 vit-4 3475.38 3553.88 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
4. T04C12.4 act-3 3400.29 3477.09 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
5. Y24D9A.4 rpl-7A 3206.40 3278.83 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
6. F13B10.2 rpl-3 3113.94 3184.28 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
7. F54E7.2 rps-12 3071.64 3141.01 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
8. T04C12.6 act-1 2986.60 3054.06 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
9. F42C5.8 rps-8 2785.71 2848.63 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
10. C49H3.11 rps-2 2781.93 2844.76 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
11. RIT1P.688 2665.93 2726.15
12. E04A4.7 cyc-2.1 2615.92 2675.01 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
13. B0041.4 rpl-4 2588.04 2646.50 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
14. F02A9.3 far-2 2524.16 2581.17 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
15. R05G6.7 vdac-1 2514.49 2571.29 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
16. Y82E9BR.3 Y82E9BR.3 2489.98 2546.22 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
17. Y71F9AL.13 rpl-1 2463.92 2519.57 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
18. ZC434.2 rps-7 2400.46 2454.68 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
19. K02F2.2 ahcy-1 2387.71 2441.64 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
20. C04F12.4 rpl-14 2385.05 2438.92 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
21. F36A2.6 rps-15 2331.26 2383.91 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
22. F40F11.1 rps-11 2291.05 2342.80 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
23. F25H2.5 ndk-1 2270.04 2321.31 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
24. C42D8.2 vit-2 2263.17 2314.29 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
25. W09C5.6 rpl-31 2194.81 2244.38 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
26. F56E10.4 rps-27 2166.93 2215.87 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
27. F10B5.1 rpl-10 2159.08 2207.85 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
28. F59D8.1 vit-3 2102.91 2150.40 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
29. K07H8.6 vit-6 2100.81 2148.26 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
30. M03F4.2 act-4 2092.12 2139.37 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
31. Y105E8A.16 rps-20 2091.00 2138.23 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
32. Y71A12B.1 rps-6 2059.62 2106.14 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
33. D1007.6 rps-10 2028.52 2074.34 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
34. T04C12.5 act-2 1999.66 2044.83 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
35. K07H8.10 K07H8.10 1976.26 2020.90
36. F11C3.3 unc-54 1946.71 1990.68 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
37. C42C1.14 rpl-34 1901.04 1943.97 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
38. R13A5.8 rpl-9 1881.98 1924.49 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
39. F39B2.6 rps-26 1877.50 1919.91 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
40. F54C9.5 rpl-5 1815.30 1856.30 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
41. C34E10.6 atp-2 1791.20 1831.66 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
42. Y57G11C.15 sec-61 1789.94 1830.37 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
43. T07A9.14 T07A9.14 1781.82 1822.06
44. F28C6.7 rpl-26 1780.56 1820.77 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
45. Y69A2AR.18 Y69A2AR.18 1763.33 1803.15
46. Y75B12B.2 cyn-7 1748.34 1787.83 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
47. C14B9.7 rpl-21 1732.37 1771.49 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
48. H02I12.1 cbd-1 1712.05 1750.72 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
49. M01F1.2 rpl-16 1707.99 1746.57 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
50. F01G4.6 F01G4.6 1706.31 1744.85 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
51. F52B5.6 rpl-25.2 1688.24 1726.37 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
52. D1086.10 D1086.10 1673.22 1711.01
53. W08E12.7 W08E12.7 1667.36 1705.02
54. T22F3.4 rpl-11.1 1652.51 1689.84 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
55. F57F4.4 F57F4.4 1647.47 1684.68
56. F43D9.4 sip-1 1646.91 1684.11 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
57. B0250.1 rpl-2 1640.75 1677.81 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
58. Y38H6C.1 dct-16 1620.57 1657.18 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
59. F07A5.7 unc-15 1616.93 1653.45 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
60. Y106G6H.2 pab-1 1602.36 1638.55 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
61. D2096.8 nap-1 1599.56 1635.69 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
62. F40F8.10 rps-9 1597.46 1633.54 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
63. B0393.1 rps-0 1588.35 1624.23 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
64. Y18D10A.17 car-1 1580.37 1616.06 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
65. C56C10.8 icd-1 1575.88 1611.48 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
66. K11H12.2 rpl-15 1575.74 1611.34 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
67. Y48B6A.2 rpl-43 1563.84 1599.16 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
68. F37C12.4 rpl-36 1560.05 1595.29 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
69. R151.3 rpl-6 1514.24 1548.45 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
70. K08D12.6 K08D12.6 1497.43 1531.26
71. C08F11.11 C08F11.11 1478.24 1511.63 UPF0375 protein C08F11.11 [Source:UniProtKB/Swiss-Prot;Acc:O62053]
72. R10E11.8 vha-1 1471.38 1504.61 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
73. Y48B6A.14 hmg-1.1 1470.96 1504.18 HMG [Source:RefSeq peptide;Acc:NP_496970]
74. T20G5.2 cts-1 1454.15 1486.99 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
75. F27C1.7 atp-3 1452.04 1484.84 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
76. F37C12.9 rps-14 1420.66 1452.75 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
77. Y45F10D.12 rpl-18 1412.26 1444.16 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
78. M7.1 let-70 1387.74 1419.09 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
79. F57B9.5 byn-1 1380.04 1411.21 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
80. R09B3.3 R09B3.3 1379.90 1411.06
81. K02B2.5 rps-25 1379.48 1410.63 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
82. F25H2.10 rla-0 1373.31 1404.33 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
83. B0513.3 rpl-29 1368.13 1399.03 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
84. C09H10.2 rpl-41 1359.02 1389.72 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
85. T01C3.6 rps-16 1357.48 1388.14 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
86. F09F7.2 mlc-3 1357.20 1387.86 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
87. F56F3.5 rps-1 1353.98 1384.56 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
88. ZK652.4 rpl-35 1348.94 1379.40 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
89. F28D1.7 rps-23 1344.03 1374.39 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
90. C07H6.5 cgh-1 1343.33 1373.67 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
91. T25F10.6 clik-1 1336.61 1366.80 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
92. F26D10.3 hsp-1 1330.44 1360.50 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
93. T05F1.3 rps-19 1320.64 1350.47 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
94. C47E8.11 C47E8.11 1320.36 1350.18
95. F53G12.10 rpl-7 1320.08 1349.89 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
96. C08H9.2 vgln-1 1313.77 1343.45 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
97. Y43B11AR.4 rps-4 1311.11 1340.73 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
98. K08D12.3 K08D12.3 1268.52 1297.18
99. F53A3.3 rps-22 1261.80 1290.30 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
100. T05E11.1 rps-5 1257.32 1285.72 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA