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Experiment herm2, region R4.

Sample reads: 1,164,115. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F59D8.2 vit-4 5222.72 4486.43 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
2. E04A4.7 cyc-2.1 5120.22 4398.37 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
3. C04F12.4 rpl-14 4697.81 4035.52 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
4. T06E6.2 cyb-3 3882.68 3335.30 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
5. ZC404.8 spn-4 3852.02 3308.97 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
6. H02I12.1 cbd-1 3840.60 3299.16 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
7. B0280.5 cpg-2 3797.84 3262.43 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
8. W02A2.7 mex-5 3655.90 3140.50 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
9. R05G6.7 vdac-1 3435.28 2950.98 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
10. F54E7.2 rps-12 3388.91 2911.15 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
11. T04C12.6 act-1 3230.28 2774.88 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
12. F36A2.6 rps-15 3184.49 2735.55 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
13. RIT1P.688 3181.17 2732.69
14. F31E3.5 eef-1A.1 3062.37 2630.64 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
15. T27E9.1 ant-1.1 3008.09 2584.01 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
16. F56E10.4 rps-27 2989.25 2567.83 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
17. K02F2.2 ahcy-1 2986.71 2565.65 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
18. W09C5.6 rpl-31 2980.46 2560.28 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
19. F37C12.4 rpl-36 2873.18 2468.12 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
20. F42C5.8 rps-8 2854.73 2452.27 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
21. F02A9.3 far-2 2834.91 2435.25 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
22. F13B10.2 rpl-3 2756.03 2367.49 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
23. F11C3.3 unc-54 2730.65 2345.69 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
24. Y82E9BR.3 Y82E9BR.3 2684.18 2305.77 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
25. B0041.4 rpl-4 2654.51 2280.28 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
26. Y24D9A.4 rpl-7A 2627.86 2257.38 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
27. F43D9.4 sip-1 2607.94 2240.28 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
28. F39B2.6 rps-26 2598.57 2232.23 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
29. Y18D10A.17 car-1 2587.44 2222.67 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
30. Y57G11C.15 sec-61 2548.10 2188.87 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
31. K08D12.6 K08D12.6 2527.50 2171.18
32. C42C1.14 rpl-34 2507.00 2153.57 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
33. Y69A2AR.18 Y69A2AR.18 2471.08 2122.71
34. F59D8.1 vit-3 2467.47 2119.61 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
35. T04C12.4 act-3 2454.29 2108.28 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
36. Y105E8A.16 rps-20 2428.12 2085.81 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
37. C42D8.2 vit-2 2357.35 2025.01 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
38. R13A5.8 rpl-9 2335.97 2006.65 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
39. F25H2.5 ndk-1 2325.92 1998.01 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
40. F40F11.1 rps-11 2323.38 1995.83 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
41. C14B9.7 rpl-21 2230.34 1915.91 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
42. F52E1.1 pos-1 2220.97 1907.86 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
43. D1007.6 rps-10 2167.38 1861.82 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
44. ZC513.6 oma-2 2165.91 1860.57
45. C34E10.6 atp-2 2150.20 1847.07 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
46. F07A5.7 unc-15 2148.64 1845.72 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
47. R10E11.8 vha-1 2138.19 1836.75 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
48. C08H9.2 vgln-1 2079.81 1786.60 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
49. Y71A12B.1 rps-6 2067.51 1776.04 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
50. Y48B6A.14 hmg-1.1 2064.19 1773.19 HMG [Source:RefSeq peptide;Acc:NP_496970]
51. Y71F9AL.13 rpl-1 2059.80 1769.41 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
52. Y106G6H.2 pab-1 2056.87 1766.90 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
53. C49H3.11 rps-2 2048.38 1759.60 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
54. Y56A3A.21 trap-4 2034.81 1747.94 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
55. K07H8.6 vit-6 2023.68 1738.39 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
56. Y75B12B.2 cyn-7 2022.90 1737.71 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
57. ZC434.2 rps-7 2019.87 1735.11 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
58. K11H12.2 rpl-15 1970.87 1693.02 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
59. F28C6.7 rpl-26 1933.28 1660.73 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
60. M01F1.2 rpl-16 1920.79 1650.00 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
61. C56C10.8 icd-1 1917.96 1647.57 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
62. B0513.3 rpl-29 1885.25 1619.47 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
63. F52B5.6 rpl-25.2 1881.35 1616.12 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
64. K02B2.5 rps-25 1876.47 1611.93 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
65. C09H10.2 rpl-41 1866.90 1603.71 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
66. T07A9.14 T07A9.14 1864.36 1601.53
67. F10B5.1 rpl-10 1817.60 1561.36 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
68. C06B8.8 rpl-38 1810.67 1555.41 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
69. B0393.1 rps-0 1790.27 1537.88 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
70. F53G12.5 mex-3 1777.95 1527.30 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
71. F55D10.2 rpl-25.1 1776.11 1525.72 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
72. F26D10.3 hsp-1 1775.24 1524.97 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
73. F57B1.4 col-160 1770.55 1520.94 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
74. M03F4.2 act-4 1763.42 1514.82 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
75. B0250.1 rpl-2 1744.19 1498.30 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
76. F37C12.9 rps-14 1738.04 1493.02 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
77. C07H6.5 cgh-1 1712.37 1470.96 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
78. F46F11.2 cey-2 1702.80 1462.74 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
79. Y49A3A.3 Y49A3A.3 1677.03 1440.60
80. W06A7.3 ret-1 1655.36 1421.99 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
81. R02F2.1 R02F2.1 1632.42 1402.28
82. T04C12.5 act-2 1620.70 1392.22 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
83. F28H1.2 cpn-3 1612.31 1385.01 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
84. Y48B6A.2 rpl-43 1610.16 1383.16 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
85. Y38H6C.1 dct-16 1604.01 1377.88 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
86. C25A1.8 clec-87 1583.66 1360.40 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
87. T25F10.6 clik-1 1577.75 1355.32 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
88. Y71F9AM.6 trap-1 1575.70 1353.56 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_491076]
89. C16A3.9 rps-13 1572.18 1350.54 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
90. Y45F10D.12 rpl-18 1562.62 1342.32 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
91. K08D12.3 K08D12.3 1561.15 1341.06
92. M7.1 let-70 1551.00 1332.34 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
93. F01G12.5 let-2 1548.66 1330.33 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
94. ZK652.4 rpl-35 1540.07 1322.95 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
95. F01G4.6 F01G4.6 1537.63 1320.85 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
96. C06A1.1 cdc-48.1 1535.87 1319.34 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
97. T25C8.2 act-5 1528.84 1313.31 ACTin [Source:RefSeq peptide;Acc:NP_499809]
98. F28D1.7 rps-23 1509.32 1296.54 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
99. W07G4.4 lap-2 1508.73 1296.03 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
100. C44B12.5 perm-4 1507.07 1294.61 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA