C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T12F5.3

Gene ID Gene Name Reads Transcripts Annotation
T12F5.3 glh-4 3381 T12F5.3.1, T12F5.3.2 ATP-dependent RNA helicase glh-4 [Source:UniProtKB/Swiss-Prot;Acc:O76743]

Genes with expression patterns similar to T12F5.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T12F5.3 glh-4 3381 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP-dependent RNA helicase glh-4 [Source:UniProtKB/Swiss-Prot;Acc:O76743]
2. D1081.8 cdc-5L 8553 7.616 0.905 0.976 0.960 0.976 0.959 0.964 0.919 0.957 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
3. ZK512.5 sec-16 8325 7.595 0.901 0.959 0.951 0.959 0.979 0.954 0.955 0.937
4. C08B6.7 wdr-20 7575 7.583 0.912 0.954 0.951 0.954 0.983 0.967 0.952 0.910 WD repeat-containing protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:D9N129]
5. Y65B4BL.2 deps-1 18277 7.57 0.893 0.969 0.929 0.969 0.930 0.964 0.967 0.949
6. ZK507.6 cya-1 6807 7.565 0.936 0.951 0.963 0.951 0.972 0.968 0.902 0.922 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
7. F58A4.3 hcp-3 8787 7.544 0.884 0.949 0.938 0.949 0.936 0.969 0.946 0.973 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
8. C27B7.1 spr-2 14958 7.543 0.929 0.970 0.935 0.970 0.948 0.939 0.913 0.939 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
9. D2030.1 mans-1 7029 7.532 0.920 0.928 0.939 0.928 0.960 0.976 0.958 0.923 alpha-1,2-Mannosidase [Source:RefSeq peptide;Acc:NP_492116]
10. C18G1.4 pgl-3 5291 7.532 0.861 0.968 0.895 0.968 0.936 0.972 0.956 0.976 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
11. T07C4.10 T07C4.10 1563 7.531 0.878 0.938 0.927 0.938 0.962 0.975 0.965 0.948
12. Y11D7A.12 flh-1 4612 7.53 0.939 0.930 0.949 0.930 0.923 0.979 0.928 0.952 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
13. F18A11.1 puf-6 11201 7.488 0.936 0.919 0.908 0.919 0.955 0.980 0.918 0.953 Pumilio domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O01322]
14. VW02B12L.3 ebp-2 12251 7.485 0.931 0.912 0.932 0.912 0.975 0.938 0.938 0.947 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_496438]
15. T05C12.6 mig-5 5242 7.484 0.903 0.939 0.918 0.939 0.947 0.964 0.930 0.944 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
16. Y54H5A.3 tag-262 4269 7.484 0.905 0.939 0.968 0.939 0.936 0.961 0.913 0.923
17. B0035.3 B0035.3 4118 7.483 0.924 0.977 0.945 0.977 0.915 0.935 0.888 0.922
18. ZK637.7 lin-9 5999 7.48 0.894 0.928 0.928 0.928 0.964 0.975 0.914 0.949
19. C18G1.5 hil-4 21692 7.475 0.924 0.962 0.914 0.962 0.943 0.921 0.928 0.921 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
20. F43G9.9 cpn-1 14505 7.47 0.915 0.962 0.930 0.962 0.939 0.953 0.875 0.934 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
21. Y49E10.3 pph-4.2 8662 7.468 0.920 0.943 0.926 0.943 0.920 0.943 0.908 0.965 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
22. F25B5.7 nono-1 2822 7.465 0.937 0.907 0.938 0.907 0.966 0.938 0.929 0.943 NONO (conserved nuclear protein, aka PSF) homolog [Source:RefSeq peptide;Acc:NP_498297]
23. F56C9.6 F56C9.6 4303 7.462 0.946 0.933 0.917 0.933 0.961 0.958 0.879 0.935
24. R07G3.5 pgam-5 11646 7.452 0.924 0.936 0.912 0.936 0.959 0.928 0.944 0.913 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
25. C33H5.12 rsp-6 23342 7.446 0.913 0.951 0.945 0.951 0.929 0.925 0.916 0.916 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
26. F10C2.2 kup-1 3852 7.445 0.921 0.944 0.901 0.944 0.914 0.947 0.907 0.967
27. T13H5.7 rnh-2 3204 7.441 0.885 0.950 0.957 0.950 0.955 0.920 0.909 0.915 Ribonuclease H2 subunit A [Source:UniProtKB/Swiss-Prot;Acc:Q9U6P6]
28. Y73F8A.34 tag-349 7966 7.44 0.916 0.941 0.939 0.941 0.907 0.906 0.935 0.955
29. F58D5.4 ksr-2 5973 7.439 0.902 0.954 0.941 0.954 0.921 0.977 0.914 0.876 Kinase suppressor of Ras B [Source:UniProtKB/Swiss-Prot;Acc:G5EDA5]
30. W02B12.3 rsp-1 9235 7.438 0.875 0.936 0.910 0.936 0.952 0.939 0.955 0.935 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
31. F33D11.12 dhhc-3 2746 7.438 0.908 0.903 0.959 0.903 0.910 0.961 0.953 0.941 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_491702]
32. K12D12.2 npp-3 6914 7.438 0.834 0.973 0.945 0.973 0.949 0.929 0.897 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
33. C13G5.2 C13G5.2 3532 7.436 0.903 0.972 0.912 0.972 0.906 0.919 0.927 0.925
34. B0495.6 moa-2 6366 7.434 0.928 0.955 0.872 0.955 0.923 0.928 0.926 0.947
35. C39E9.13 rfc-3 9443 7.426 0.913 0.951 0.943 0.951 0.936 0.883 0.905 0.944 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
36. T04A8.14 emb-5 11746 7.426 0.921 0.960 0.931 0.960 0.931 0.878 0.950 0.895 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
37. C09G4.3 cks-1 17852 7.422 0.933 0.959 0.966 0.959 0.909 0.949 0.870 0.877 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
38. Y17G7B.5 mcm-2 6246 7.422 0.902 0.973 0.963 0.973 0.871 0.959 0.845 0.936 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
39. F32E10.6 cec-5 10643 7.418 0.932 0.958 0.928 0.958 0.906 0.897 0.921 0.918 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
40. Y43C5A.6 rad-51 5327 7.414 0.906 0.971 0.941 0.971 0.915 0.878 0.916 0.916 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
41. C02B10.5 C02B10.5 9171 7.414 0.904 0.950 0.957 0.950 0.912 0.898 0.903 0.940
42. Y17G7A.1 hmg-12 29989 7.414 0.881 0.952 0.900 0.952 0.893 0.947 0.928 0.961 HMG [Source:RefSeq peptide;Acc:NP_496544]
43. C18D11.4 rsp-8 18308 7.414 0.894 0.955 0.932 0.955 0.912 0.925 0.920 0.921 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
44. R08C7.3 htz-1 32725 7.414 0.915 0.950 0.908 0.950 0.968 0.920 0.873 0.930 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
45. Y54E2A.3 tac-1 6308 7.412 0.879 0.971 0.936 0.971 0.901 0.948 0.875 0.931 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
46. C36B1.8 gls-1 8617 7.411 0.906 0.961 0.947 0.961 0.925 0.890 0.901 0.920 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
47. T07D4.3 rha-1 5898 7.41 0.887 0.959 0.901 0.959 0.900 0.915 0.941 0.948 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
48. F33H1.2 gpd-4 5618 7.408 0.912 0.908 0.896 0.908 0.946 0.963 0.950 0.925 Glyceraldehyde-3-phosphate dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P17331]
49. F02E9.9 dpt-1 5401 7.407 0.910 0.958 0.933 0.958 0.931 0.882 0.915 0.920 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
50. W02D9.1 pri-2 6048 7.406 0.903 0.962 0.887 0.962 0.922 0.879 0.944 0.947 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
51. Y47G6A.2 inx-22 3576 7.403 0.921 0.939 0.941 0.939 0.910 0.980 0.915 0.858 Innexin [Source:RefSeq peptide;Acc:NP_491186]
52. M04B2.2 M04B2.2 1191 7.401 0.835 0.910 0.964 0.910 0.916 0.960 0.967 0.939
53. T27F2.1 skp-1 3532 7.4 0.896 0.954 0.903 0.954 0.934 0.950 0.935 0.874 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
54. M01E11.3 M01E11.3 1946 7.399 0.921 0.949 0.906 0.949 0.899 0.956 0.928 0.891
55. B0273.2 puf-7 3256 7.394 0.892 0.930 0.891 0.930 0.941 0.956 0.915 0.939 Pumilio domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O44169]
56. C29E4.2 kle-2 5527 7.392 0.899 0.969 0.962 0.969 0.890 0.912 0.881 0.910 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
57. ZK973.3 pdp-1 3966 7.391 0.912 0.934 0.949 0.934 0.955 0.952 0.903 0.852 Pyruvate Dehydrogenase Phosphatase homolog [Source:RefSeq peptide;Acc:NP_491357]
58. Y37D8A.13 unc-71 3115 7.386 0.923 0.937 0.953 0.937 0.964 0.914 0.912 0.846 ADM-1 preproprotein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EFD5]
59. K10C3.2 ensa-1 19836 7.385 0.923 0.961 0.956 0.961 0.904 0.906 0.859 0.915 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
60. Y37H2A.5 fbxa-210 2230 7.384 0.886 0.947 0.929 0.947 0.956 0.960 0.798 0.961 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
61. C05D11.3 txdc-9 4903 7.382 0.839 0.973 0.898 0.973 0.935 0.930 0.903 0.931 Thioredoxin domain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q11183]
62. C16C10.3 hrde-1 14922 7.38 0.851 0.962 0.920 0.962 0.933 0.968 0.879 0.905 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
63. F32D1.6 neg-1 4990 7.379 0.908 0.922 0.941 0.922 0.906 0.936 0.882 0.962 Negative Effect on Gut development [Source:RefSeq peptide;Acc:NP_001256036]
64. F56A3.3 npp-6 5425 7.379 0.888 0.955 0.928 0.955 0.935 0.891 0.901 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
65. Y47G6A.8 crn-1 3494 7.378 0.910 0.936 0.942 0.936 0.955 0.929 0.851 0.919 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
66. Y56A3A.20 ccf-1 18463 7.377 0.838 0.971 0.951 0.971 0.931 0.902 0.885 0.928 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
67. C09H10.6 nasp-1 6094 7.377 0.934 0.949 0.880 0.949 0.925 0.956 0.925 0.859 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
68. T05F1.6 hsr-9 13312 7.374 0.891 0.962 0.929 0.962 0.928 0.884 0.887 0.931
69. F37A4.9 bath-41 2558 7.373 0.919 0.959 0.924 0.959 0.899 0.944 0.873 0.896 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
70. T24D1.4 tag-179 3757 7.371 0.849 0.938 0.953 0.938 0.887 0.942 0.928 0.936
71. Y39H10A.7 chk-1 3350 7.366 0.883 0.920 0.956 0.920 0.917 0.947 0.928 0.895 Serine/threonine-protein kinase chk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Z3]
72. T05E11.4 spo-11 2806 7.364 0.887 0.963 0.968 0.963 0.902 0.919 0.899 0.863 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
73. D1054.15 plrg-1 2282 7.364 0.899 0.950 0.908 0.950 0.943 0.883 0.859 0.972 PLeiotropic ReGulator (vertebrate) homolog [Source:RefSeq peptide;Acc:NP_001256260]
74. F46B6.3 smg-4 4959 7.363 0.848 0.940 0.907 0.940 0.932 0.975 0.885 0.936 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
75. C33H5.15 sgo-1 3674 7.362 0.938 0.951 0.942 0.951 0.903 0.902 0.828 0.947 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
76. F52E1.10 vha-18 3090 7.36 0.858 0.945 0.957 0.945 0.937 0.888 0.923 0.907 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
77. C28H8.9 dpff-1 8684 7.359 0.861 0.952 0.962 0.952 0.930 0.921 0.912 0.869 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
78. F22D6.3 nars-1 18624 7.358 0.856 0.964 0.861 0.964 0.927 0.922 0.928 0.936 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
79. C05C8.6 hpo-9 8263 7.354 0.877 0.962 0.920 0.962 0.874 0.943 0.871 0.945
80. F25B5.2 nop-1 4127 7.354 0.878 0.955 0.904 0.955 0.902 0.920 0.920 0.920 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
81. F19F10.12 F19F10.12 2474 7.353 0.875 0.962 0.942 0.962 0.889 0.917 0.913 0.893
82. Y67H2A.6 csn-6 3098 7.352 0.796 0.947 0.925 0.947 0.922 0.962 0.935 0.918 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
83. Y71D11A.2 smr-1 4976 7.351 0.927 0.955 0.913 0.955 0.892 0.951 0.923 0.835 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
84. F28B3.7 him-1 18274 7.35 0.868 0.956 0.903 0.956 0.865 0.916 0.927 0.959 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
85. B0547.1 csn-5 3568 7.35 0.897 0.963 0.963 0.963 0.874 0.915 0.884 0.891 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
86. F01G4.3 skih-2 3353 7.347 0.891 0.945 0.935 0.945 0.883 0.900 0.950 0.898 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
87. R06C7.1 wago-1 4303 7.346 0.927 0.952 0.957 0.952 0.898 0.908 0.907 0.845 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
88. Y110A7A.10 aap-1 4134 7.345 0.909 0.939 0.935 0.939 0.908 0.954 0.904 0.857 phosphoinositide kinase AdAPter subunit [Source:RefSeq peptide;Acc:NP_491522]
89. Y56A3A.17 npp-16 5391 7.345 0.906 0.957 0.947 0.957 0.865 0.921 0.877 0.915 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
90. F32D1.10 mcm-7 21233 7.344 0.936 0.964 0.972 0.964 0.897 0.928 0.806 0.877 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
91. C03D6.5 asfl-1 1678 7.343 0.877 0.944 0.932 0.944 0.865 0.915 0.902 0.964 Probable histone chaperone asf-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q17603]
92. D2089.1 rsp-7 11057 7.343 0.906 0.951 0.912 0.951 0.890 0.916 0.887 0.930 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
93. R02D3.5 fnta-1 5258 7.343 0.871 0.951 0.912 0.951 0.939 0.897 0.919 0.903 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
94. F23F1.1 nfyc-1 9983 7.343 0.901 0.967 0.917 0.967 0.830 0.911 0.899 0.951 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
95. R06F6.5 npp-19 5067 7.342 0.846 0.962 0.944 0.962 0.927 0.890 0.892 0.919 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
96. C29H12.5 cec-9 1197 7.342 0.762 0.949 0.886 0.949 0.930 0.973 0.941 0.952 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_495224]
97. T01G1.3 sec-31 10504 7.342 0.829 0.965 0.950 0.965 0.930 0.872 0.946 0.885 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
98. K06A5.7 cdc-25.1 14961 7.341 0.914 0.944 0.927 0.944 0.868 0.961 0.854 0.929 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
99. K04C2.4 brd-1 2439 7.341 0.912 0.963 0.876 0.963 0.862 0.896 0.919 0.950 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
100. C05C8.4 gei-6 6026 7.339 0.905 0.960 0.916 0.960 0.884 0.883 0.932 0.899 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]

There are 1346 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA