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Results for R09B5.3

Gene ID Gene Name Reads Transcripts Annotation
R09B5.3 cnc-2 4190 R09B5.3a, R09B5.3b CaeNaCin (Caenorhabditis bacteriocin) [Source:RefSeq peptide;Acc:NP_503418]

Genes with expression patterns similar to R09B5.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R09B5.3 cnc-2 4190 2 - - - - - - 1.000 1.000 CaeNaCin (Caenorhabditis bacteriocin) [Source:RefSeq peptide;Acc:NP_503418]
2. R09B5.9 cnc-4 5356 1.911 - - - - - - 0.963 0.948 CaeNaCin (Caenorhabditis bacteriocin) [Source:RefSeq peptide;Acc:NP_503416]
3. B0213.5 nlp-30 3824 1.906 - - - - - - 0.964 0.942 Neuropeptide-like protein 30 QWGYGGY-amide GYGGYGGY-amide GYGGY-amide GMW-amide PYGGYGW-amide [Source:UniProtKB/Swiss-Prot;Acc:O44663]
4. B0213.4 nlp-29 14893 1.817 - - - - - - 0.987 0.830 Neuropeptide-like protein 29 QWGYGGY-amide GYGGYGGY-amide GMYGGY-amide GMYGGW-amide [Source:UniProtKB/Swiss-Prot;Acc:O44664]
5. ZK970.8 ZK970.8 1474 1.743 - - - - - - 0.957 0.786
6. F16B4.5 F16B4.5 0 1.742 - - - - - - 0.972 0.770
7. Y19D10A.18 Y19D10A.18 0 1.606 - - - - - - 0.951 0.655
8. W01G7.4 W01G7.4 2906 1.487 - - - - - - 0.963 0.524
9. B0334.1 ttr-18 9955 1.485 - - - - - - 0.964 0.521 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_496453]
10. F58A6.1 F58A6.1 912 1.176 - - - - - - 0.956 0.220
11. Y73F8A.25 ntl-11 3606 0.99 - - - - - - 0.038 0.952 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_502860]
12. F53B6.9 fip-6 2363 0.969 - - - - - - 0.969 - Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_740901]
13. F15H10.3 apc-10 1709 0.927 - - - - - - -0.025 0.952 Anaphase Promoting Complex; see also mat [Source:RefSeq peptide;Acc:NP_001256220]
14. Y95D11A.3 Y95D11A.3 1480 0.909 - - - - - - -0.058 0.967
15. F40D4.12 F40D4.12 0 0.885 - - - - - - -0.069 0.954
16. B0432.3 mrpl-41 5514 0.866 - - - - - - -0.087 0.953 39S ribosomal protein L41, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90993]
17. Y49E10.15 snr-6 8505 0.865 - - - - - - -0.086 0.951 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
18. W08E3.1 snr-2 14849 0.865 - - - - - - -0.088 0.953 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
19. Y71G12B.8 ddx-27 3584 0.864 - - - - - - -0.089 0.953 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
20. F26F4.11 rpb-8 7601 0.861 - - - - - - -0.096 0.957 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
21. F58A4.9 rpac-19 2692 0.858 - - - - - - -0.111 0.969 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
22. Y48B6A.3 xrn-2 4881 0.858 - - - - - - -0.115 0.973 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
23. D2096.8 nap-1 59459 0.856 - - - - - - -0.095 0.951 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
24. B0240.4 npp-22 5510 0.853 - - - - - - -0.105 0.958 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
25. Y39B6A.35 tgt-2 2364 0.853 - - - - - - -0.108 0.961 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
26. Y14H12B.2 Y14H12B.2 6496 0.845 - - - - - - -0.113 0.958
27. T06E6.2 cyb-3 43989 0.844 - - - - - - -0.116 0.960 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
28. E02H1.2 E02H1.2 2194 0.842 - - - - - - -0.109 0.951 Uncharacterized GTP-binding protein E02H1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09523]
29. D2023.5 mpst-1 10328 0.841 - - - - - - -0.112 0.953 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
30. C05C8.5 C05C8.5 2655 0.835 - - - - - - -0.119 0.954
31. K04C2.3 K04C2.3 23540 0.833 - - - - - - -0.122 0.955
32. T23F6.4 rbd-1 5825 0.831 - - - - - - -0.119 0.950 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
33. Y39B6A.36 Y39B6A.36 1840 0.83 - - - - - - -0.121 0.951 General transcription factor IIF subunit 2 [Source:RefSeq peptide;Acc:NP_741661]
34. ZK470.1 ZK470.1 281 0.829 - - - - - - -0.124 0.953
35. C06A1.5 rpb-6 7515 0.829 - - - - - - -0.126 0.955 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
36. K07C5.6 K07C5.6 7375 0.828 - - - - - - -0.133 0.961 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
37. F53F10.1 F53F10.1 0 0.828 - - - - - - -0.140 0.968
38. Y54H5A.2 Y54H5A.2 2168 0.828 - - - - - - -0.124 0.952
39. Y110A7A.16 elpc-1 3641 0.826 - - - - - - -0.124 0.950 Elongator complex protein 1 [Source:RefSeq peptide;Acc:NP_491524]
40. B0261.8 B0261.8 304 0.825 - - - - - - -0.129 0.954
41. C43E11.12 C43E11.12 473 0.825 - - - - - - -0.131 0.956
42. W07E6.1 nol-1 7892 0.824 - - - - - - -0.131 0.955 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
43. ZK945.3 puf-12 6266 0.823 - - - - - - -0.127 0.950 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
44. M28.8 M28.8 490 0.822 - - - - - - -0.132 0.954
45. C48B4.7 C48B4.7 4006 0.817 - - - - - - -0.138 0.955
46. Y41D4B.14 Y41D4B.14 0 0.816 - - - - - - -0.145 0.961
47. Y113G7B.17 prmt-1 43709 0.813 - - - - - - -0.147 0.960 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
48. K08A2.1 K08A2.1 818 0.813 - - - - - - -0.145 0.958
49. Y61A9LA.11 Y61A9LA.11 1585 0.813 - - - - - - -0.137 0.950
50. T01C3.7 fib-1 23572 0.812 - - - - - - -0.142 0.954 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
51. Y39E4B.2 snpc-1.2 5800 0.811 - - - - - - -0.141 0.952 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
52. F52F12.4 lsl-1 4055 0.803 - - - - - - -0.148 0.951 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
53. F53G12.5 mex-3 29076 0.8 - - - - - - -0.159 0.959 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
54. R11A8.2 R11A8.2 3420 0.798 - - - - - - -0.153 0.951 Protein mos-2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21924]
55. Y37D8A.9 mrg-1 14369 0.798 - - - - - - -0.152 0.950 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
56. T05B9.2 T05B9.2 0 0.797 - - - - - - -0.166 0.963
57. R09E10.10 R09E10.10 0 0.793 - - - - - - -0.157 0.950
58. F26B1.3 ima-2 18826 0.79 - - - - - - -0.161 0.951 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA