C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R06C7.8

Gene ID Gene Name Reads Transcripts Annotation
R06C7.8 bub-1 1939 R06C7.8 Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:Q21776]

Genes with expression patterns similar to R06C7.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R06C7.8 bub-1 1939 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:Q21776]
2. C02F5.1 knl-1 6637 7.666 0.969 0.959 0.915 0.959 0.990 0.963 0.970 0.941 Kinetochore null protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34278]
3. Y71F9B.7 plk-2 6594 7.649 0.947 0.959 0.920 0.959 0.989 0.963 0.947 0.965 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
4. C01H6.5 nhr-23 6765 7.588 0.939 0.972 0.906 0.972 0.982 0.990 0.917 0.910 Nuclear hormone receptor family member nhr-23 [Source:UniProtKB/Swiss-Prot;Acc:P41828]
5. K08E3.6 cyk-4 8158 7.583 0.946 0.965 0.914 0.965 0.965 0.938 0.954 0.936 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
6. B0238.11 B0238.11 9926 7.575 0.938 0.944 0.907 0.944 0.976 0.955 0.942 0.969
7. Y48E1B.12 csc-1 5135 7.568 0.929 0.930 0.891 0.930 0.992 0.987 0.978 0.931 Chromosome segregation and cytokinesis defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O45952]
8. K09H11.3 rga-3 6319 7.566 0.908 0.951 0.912 0.951 0.984 0.950 0.939 0.971 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
9. T22D1.9 rpn-1 25674 7.566 0.930 0.951 0.902 0.951 0.983 0.947 0.953 0.949 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
10. Y53C12A.1 wee-1.3 16766 7.554 0.958 0.922 0.912 0.922 0.976 0.968 0.917 0.979 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 [Source:UniProtKB/Swiss-Prot;Acc:O18209]
11. W08F4.8 cdc-37 23424 7.549 0.885 0.965 0.889 0.965 0.986 0.970 0.946 0.943 Probable Hsp90 co-chaperone cdc37 [Source:UniProtKB/Swiss-Prot;Acc:O02108]
12. F56A3.4 spd-5 3289 7.544 0.925 0.968 0.899 0.968 0.967 0.912 0.942 0.963 Spindle-defective protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P91349]
13. W07A8.2 ipla-3 2440 7.536 0.924 0.945 0.945 0.945 0.974 0.982 0.892 0.929 Intracelllar PhosphoLipase A family [Source:RefSeq peptide;Acc:NP_508000]
14. M18.8 dhhc-6 7929 7.534 0.921 0.931 0.888 0.931 0.991 0.971 0.967 0.934 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_502302]
15. K07C11.2 air-1 13838 7.53 0.931 0.965 0.895 0.965 0.951 0.919 0.954 0.950 Aurora/Ipl1 Related kinase [Source:RefSeq peptide;Acc:NP_505119]
16. Y43F4B.6 klp-19 13220 7.53 0.950 0.926 0.942 0.926 0.979 0.958 0.929 0.920 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
17. Y54G2A.5 dml-1 7705 7.522 0.884 0.970 0.908 0.970 0.961 0.959 0.962 0.908 yeast DiM Like [Source:RefSeq peptide;Acc:NP_001023505]
18. F29D11.2 capg-1 9440 7.518 0.959 0.946 0.894 0.946 0.973 0.925 0.943 0.932 CAP-G condensin subunit [Source:RefSeq peptide;Acc:NP_492128]
19. F16A11.3 ppfr-1 12640 7.517 0.951 0.959 0.893 0.959 0.974 0.944 0.954 0.883 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
20. ZK1055.1 hcp-1 5565 7.515 0.947 0.951 0.895 0.951 0.938 0.910 0.959 0.964 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_504677]
21. R04F11.5 R04F11.5 4201 7.506 0.948 0.947 0.902 0.947 0.961 0.906 0.951 0.944
22. M04F3.1 rpa-2 4944 7.502 0.927 0.943 0.871 0.943 0.982 0.964 0.957 0.915 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
23. C23G10.4 rpn-2 17587 7.499 0.944 0.962 0.892 0.962 0.970 0.909 0.916 0.944 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
24. F20D12.4 czw-1 2729 7.496 0.926 0.932 0.919 0.932 0.983 0.898 0.985 0.921 Caenorhabditis Zeste White 10 (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_501327]
25. Y45F10D.9 sas-6 9563 7.495 0.921 0.964 0.920 0.964 0.971 0.919 0.934 0.902 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
26. B0205.3 rpn-10 16966 7.494 0.896 0.953 0.900 0.953 0.979 0.948 0.938 0.927 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
27. M18.7 aly-3 7342 7.482 0.916 0.935 0.896 0.935 0.974 0.938 0.937 0.951 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_001076697]
28. E01A2.6 akir-1 25022 7.481 0.925 0.961 0.893 0.961 0.960 0.907 0.944 0.930 AKIRin (conserved nuclear protein family) homolog [Source:RefSeq peptide;Acc:NP_491304]
29. T12C9.7 T12C9.7 4155 7.47 0.898 0.973 0.878 0.973 0.953 0.967 0.910 0.918
30. F20G4.3 nmy-2 27210 7.469 0.941 0.967 0.908 0.967 0.959 0.878 0.921 0.928 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
31. C32F10.1 obr-4 7473 7.464 0.901 0.961 0.915 0.961 0.939 0.939 0.905 0.943 Oxysterol-binding protein [Source:RefSeq peptide;Acc:NP_491691]
32. C07G1.5 hgrs-1 6062 7.458 0.944 0.968 0.830 0.968 0.959 0.947 0.918 0.924 Hepatocyte Growth factor-Regulated TK Substrate (HRS) family [Source:RefSeq peptide;Acc:NP_501375]
33. Y39G10AR.2 zwl-1 3666 7.457 0.874 0.945 0.918 0.945 0.952 0.990 0.899 0.934 Protein zwilch homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95XP9]
34. T09B4.2 T09B4.2 2820 7.451 0.899 0.948 0.881 0.948 0.982 0.946 0.942 0.905
35. F26F4.6 F26F4.6 2992 7.448 0.896 0.946 0.891 0.946 0.989 0.947 0.921 0.912
36. F30A10.10 usp-48 11536 7.446 0.937 0.971 0.895 0.971 0.972 0.889 0.940 0.871 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
37. C54G10.2 rfc-1 8814 7.443 0.951 0.954 0.915 0.954 0.956 0.912 0.908 0.893 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
38. F44E7.5 F44E7.5 1980 7.443 0.938 0.948 0.893 0.948 0.968 0.946 0.922 0.880
39. C27A12.8 ari-1 6342 7.441 0.914 0.939 0.910 0.939 0.964 0.962 0.899 0.914 ARI (ubiquitin ligase Ariadne) homolog [Source:RefSeq peptide;Acc:NP_491749]
40. F34D10.2 evl-18 4675 7.438 0.919 0.947 0.902 0.947 0.918 0.950 0.899 0.956
41. F49C12.8 rpn-7 15688 7.432 0.902 0.973 0.895 0.973 0.970 0.901 0.918 0.900 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
42. F53C11.5 F53C11.5 7387 7.431 0.946 0.975 0.866 0.975 0.981 0.955 0.877 0.856
43. F23F12.6 rpt-3 6433 7.425 0.882 0.955 0.892 0.955 0.973 0.919 0.919 0.930 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
44. F49D11.9 tag-296 7973 7.423 0.931 0.963 0.895 0.963 0.975 0.918 0.951 0.827
45. R11D1.1 R11D1.1 2431 7.422 0.947 0.918 0.888 0.918 0.978 0.933 0.936 0.904
46. T12A2.8 gen-1 10490 7.421 0.942 0.957 0.926 0.957 0.965 0.915 0.915 0.844 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
47. Y108G3AL.1 cul-3 7748 7.42 0.880 0.940 0.862 0.940 0.966 0.934 0.951 0.947 Cullin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q17391]
48. F29G9.5 rpt-2 18618 7.418 0.905 0.969 0.885 0.969 0.975 0.919 0.914 0.882 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
49. F56H1.4 rpt-5 16849 7.417 0.924 0.955 0.890 0.955 0.947 0.923 0.889 0.934 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
50. Y49E10.1 rpt-6 7806 7.413 0.903 0.926 0.913 0.926 0.972 0.936 0.939 0.898 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
51. F23B12.8 bmk-1 2519 7.41 0.882 0.941 0.883 0.941 0.961 0.950 0.883 0.969 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001256586]
52. Y105E8B.4 bath-40 6638 7.408 0.958 0.932 0.860 0.932 0.989 0.940 0.928 0.869 BTB and MATH domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9NF14]
53. F58A4.10 ubc-7 29547 7.407 0.876 0.950 0.888 0.950 0.984 0.921 0.915 0.923 Probable ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:P34477]
54. Y75B7AL.4 rga-4 7903 7.406 0.898 0.947 0.812 0.947 0.986 0.954 0.937 0.925 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_001041201]
55. E04F6.5 acdh-12 6267 7.406 0.877 0.965 0.903 0.965 0.964 0.934 0.886 0.912 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_001022062]
56. C41C4.8 cdc-48.2 7843 7.401 0.917 0.940 0.900 0.940 0.960 0.915 0.892 0.937 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
57. C12D8.10 akt-1 12100 7.4 0.948 0.957 0.904 0.957 0.966 0.912 0.905 0.851 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
58. B0379.3 mut-16 6434 7.399 0.970 0.950 0.899 0.950 0.950 0.945 0.871 0.864 MUTator [Source:RefSeq peptide;Acc:NP_492660]
59. T27F2.3 bir-1 4216 7.398 0.869 0.896 0.940 0.896 0.986 0.917 0.956 0.938 BIR (baculovirus inhibitory repeat) family [Source:RefSeq peptide;Acc:NP_505949]
60. F59E12.5 npl-4.2 5567 7.395 0.934 0.943 0.924 0.943 0.960 0.890 0.926 0.875 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
61. K11D9.1 klp-7 14582 7.395 0.890 0.946 0.905 0.946 0.979 0.917 0.935 0.877 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001022677]
62. F32H2.3 spd-2 2335 7.394 0.877 0.941 0.913 0.941 0.940 0.910 0.969 0.903 Spindle-defective protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P91870]
63. C50C3.8 bath-42 18053 7.394 0.931 0.967 0.897 0.967 0.969 0.913 0.897 0.853 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
64. M03D4.1 zen-4 8185 7.393 0.935 0.960 0.862 0.960 0.945 0.903 0.933 0.895 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
65. Y71F9AL.18 parp-1 3736 7.386 0.959 0.936 0.914 0.936 0.961 0.952 0.871 0.857 Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
66. F26F4.13 kbp-2 1304 7.385 0.904 0.924 0.872 0.924 0.957 0.988 0.911 0.905 KNL (kinetochore null) Binding Protein [Source:RefSeq peptide;Acc:NP_741121]
67. W09D10.2 tat-3 11820 7.385 0.980 0.966 0.927 0.966 0.944 0.883 0.874 0.845 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
68. D2030.2 D2030.2 6741 7.38 0.920 0.930 0.873 0.930 0.973 0.915 0.959 0.880
69. T03F1.9 hcp-4 4908 7.377 0.933 0.957 0.890 0.957 0.933 0.946 0.872 0.889 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_491244]
70. ZK353.8 ubxn-4 6411 7.374 0.931 0.957 0.893 0.957 0.963 0.915 0.918 0.840 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
71. D2085.3 D2085.3 2166 7.372 0.945 0.919 0.916 0.919 0.984 0.907 0.927 0.855
72. D2096.4 sqv-1 5567 7.37 0.871 0.951 0.906 0.951 0.979 0.922 0.859 0.931 SQuashed Vulva [Source:RefSeq peptide;Acc:NP_001294050]
73. C06A1.1 cdc-48.1 52743 7.366 0.895 0.971 0.894 0.971 0.972 0.886 0.890 0.887 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
74. C13G3.3 pptr-2 13586 7.364 0.915 0.937 0.894 0.937 0.955 0.889 0.915 0.922 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_001256283]
75. ZK20.5 rpn-12 9173 7.362 0.887 0.946 0.942 0.946 0.954 0.929 0.879 0.879 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
76. C34G6.7 stam-1 9506 7.358 0.895 0.925 0.877 0.925 0.959 0.926 0.916 0.935 Signal transducing adapter molecule 1 [Source:UniProtKB/Swiss-Prot;Acc:O01498]
77. C47B2.3 tba-2 31086 7.352 0.902 0.951 0.881 0.951 0.941 0.890 0.885 0.951 Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
78. F29B9.2 jmjd-1.2 8569 7.35 0.942 0.953 0.864 0.953 0.919 0.934 0.862 0.923 Lysine-specific demethylase 7 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI0]
79. R12E2.3 rpn-8 11194 7.35 0.919 0.960 0.880 0.960 0.952 0.903 0.923 0.853 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
80. Y110A2AR.3 Y110A2AR.3 7003 7.349 0.922 0.935 0.890 0.935 0.964 0.920 0.932 0.851
81. F56H1.5 ccpp-1 2753 7.348 0.894 0.899 0.903 0.899 0.952 0.977 0.898 0.926 Cytosolic carboxypeptidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O76373]
82. F30A10.6 sac-1 4596 7.348 0.848 0.925 0.866 0.925 0.972 0.942 0.951 0.919 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
83. F23C8.4 ubxn-1 25368 7.339 0.920 0.951 0.893 0.951 0.935 0.866 0.927 0.896 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
84. T05G5.8 vps-53 3157 7.338 0.902 0.928 0.906 0.928 0.956 0.911 0.966 0.841 Vacuolar protein sorting-associated protein 53 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34561]
85. F54D5.14 smc-6 10569 7.337 0.957 0.967 0.897 0.967 0.899 0.872 0.887 0.891 SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_496476]
86. C52E4.4 rpt-1 16724 7.337 0.937 0.947 0.835 0.947 0.970 0.898 0.943 0.860 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
87. F11A10.1 lex-1 13720 7.335 0.969 0.970 0.922 0.970 0.925 0.846 0.870 0.863 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
88. Y92C3B.1 kbp-4 1761 7.335 0.876 0.860 0.896 0.860 0.975 0.984 0.947 0.937 KNL (kinetochore null) Binding Protein [Source:RefSeq peptide;Acc:NP_497330]
89. F52E1.13 lmd-3 25047 7.335 0.893 0.970 0.862 0.970 0.962 0.902 0.885 0.891 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
90. T23D8.6 his-68 3992 7.335 0.893 0.967 0.954 0.967 0.946 0.854 0.925 0.829 Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588]
91. Y40B10A.1 lbp-9 30119 7.334 0.899 0.957 0.848 0.957 0.973 0.937 0.903 0.860 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
92. ZC404.3 spe-39 7397 7.327 0.929 0.914 0.914 0.914 0.970 0.947 0.880 0.859 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
93. F29B9.4 psr-1 4355 7.326 0.840 0.953 0.898 0.953 0.945 0.941 0.888 0.908 Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI4]
94. C34C12.3 pph-6 12139 7.323 0.901 0.966 0.850 0.966 0.953 0.897 0.879 0.911 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
95. F44F4.2 egg-3 5572 7.321 0.893 0.932 0.879 0.932 0.982 0.961 0.912 0.830 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_496341]
96. ZK632.7 panl-3 5387 7.321 0.918 0.943 0.895 0.943 0.956 0.895 0.874 0.897 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
97. Y45G5AM.9 Y45G5AM.9 3668 7.319 0.840 0.922 0.965 0.922 0.949 0.851 0.931 0.939
98. K02B12.3 sec-12 3590 7.319 0.909 0.904 0.872 0.904 0.980 0.961 0.940 0.849 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_492305]
99. ZK177.6 fzy-1 7330 7.317 0.917 0.964 0.896 0.964 0.924 0.928 0.810 0.914 WD repeat-containing protein fzy-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09373]
100. ZK783.2 upp-1 10266 7.313 0.891 0.940 0.862 0.940 0.962 0.915 0.912 0.891 Uridine PhosPhorylase [Source:RefSeq peptide;Acc:NP_498671]

There are 1343 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA