C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for D2096.4

Gene ID Gene Name Reads Transcripts Annotation
D2096.4 sqv-1 5567 D2096.4a, D2096.4b.1, D2096.4b.2 SQuashed Vulva [Source:RefSeq peptide;Acc:NP_001294050]

Genes with expression patterns similar to D2096.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2096.4 sqv-1 5567 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SQuashed Vulva [Source:RefSeq peptide;Acc:NP_001294050]
2. E01A2.6 akir-1 25022 7.661 0.965 0.979 0.974 0.979 0.945 0.980 0.920 0.919 AKIRin (conserved nuclear protein family) homolog [Source:RefSeq peptide;Acc:NP_491304]
3. K09H11.3 rga-3 6319 7.649 0.966 0.954 0.965 0.954 0.960 0.962 0.949 0.939 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
4. Y53C12A.1 wee-1.3 16766 7.643 0.939 0.967 0.984 0.967 0.957 0.962 0.921 0.946 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 [Source:UniProtKB/Swiss-Prot;Acc:O18209]
5. C13G3.3 pptr-2 13586 7.639 0.971 0.965 0.973 0.965 0.935 0.988 0.916 0.926 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_001256283]
6. F26F4.6 F26F4.6 2992 7.633 0.951 0.977 0.960 0.977 0.980 0.928 0.934 0.926
7. T22D1.9 rpn-1 25674 7.612 0.942 0.963 0.972 0.963 0.983 0.969 0.898 0.922 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
8. M18.7 aly-3 7342 7.609 0.966 0.959 0.952 0.959 0.946 0.980 0.923 0.924 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_001076697]
9. B0205.3 rpn-10 16966 7.607 0.960 0.975 0.963 0.975 0.974 0.973 0.896 0.891 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
10. F43D2.1 ccnk-1 4008 7.59 0.949 0.950 0.969 0.950 0.962 0.952 0.925 0.933 CyCliN K [Source:RefSeq peptide;Acc:NP_506615]
11. F49C12.8 rpn-7 15688 7.589 0.952 0.961 0.963 0.961 0.979 0.941 0.926 0.906 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
12. F52E1.13 lmd-3 25047 7.583 0.965 0.974 0.950 0.974 0.961 0.969 0.926 0.864 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
13. F23F12.6 rpt-3 6433 7.581 0.946 0.957 0.965 0.957 0.985 0.961 0.934 0.876 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
14. F58A4.10 ubc-7 29547 7.579 0.971 0.971 0.954 0.971 0.974 0.976 0.872 0.890 Probable ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:P34477]
15. Y59A8A.3 tcc-1 20646 7.578 0.946 0.973 0.983 0.973 0.974 0.902 0.913 0.914 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
16. Y71F9B.7 plk-2 6594 7.574 0.920 0.937 0.964 0.937 0.978 0.953 0.940 0.945 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
17. Y54G2A.5 dml-1 7705 7.571 0.979 0.958 0.987 0.958 0.931 0.953 0.915 0.890 yeast DiM Like [Source:RefSeq peptide;Acc:NP_001023505]
18. M18.8 dhhc-6 7929 7.564 0.976 0.963 0.975 0.963 0.964 0.960 0.862 0.901 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_502302]
19. F29B9.2 jmjd-1.2 8569 7.563 0.927 0.974 0.966 0.974 0.896 0.982 0.919 0.925 Lysine-specific demethylase 7 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI0]
20. B0238.11 B0238.11 9926 7.558 0.938 0.939 0.984 0.939 0.947 0.981 0.896 0.934
21. K07C11.2 air-1 13838 7.554 0.948 0.972 0.979 0.972 0.945 0.946 0.864 0.928 Aurora/Ipl1 Related kinase [Source:RefSeq peptide;Acc:NP_505119]
22. T19B10.6 dvc-1 3498 7.553 0.968 0.970 0.990 0.970 0.971 0.937 0.881 0.866 SprT-like domain-containing protein Spartan [Source:UniProtKB/Swiss-Prot;Acc:Q22557]
23. F59A3.4 F59A3.4 11625 7.55 0.935 0.985 0.963 0.985 0.948 0.882 0.946 0.906
24. F34D10.2 evl-18 4675 7.544 0.947 0.965 0.975 0.965 0.870 0.977 0.940 0.905
25. F56H1.4 rpt-5 16849 7.543 0.957 0.964 0.963 0.964 0.963 0.926 0.909 0.897 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
26. Y39G10AR.2 zwl-1 3666 7.542 0.957 0.980 0.970 0.980 0.921 0.917 0.904 0.913 Protein zwilch homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95XP9]
27. F20G4.3 nmy-2 27210 7.537 0.947 0.982 0.965 0.982 0.961 0.908 0.875 0.917 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
28. C50C3.8 bath-42 18053 7.536 0.967 0.986 0.976 0.986 0.976 0.882 0.908 0.855 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
29. C41C4.8 cdc-48.2 7843 7.536 0.952 0.965 0.954 0.965 0.964 0.930 0.867 0.939 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
30. F53C11.5 F53C11.5 7387 7.535 0.937 0.957 0.975 0.957 0.981 0.948 0.900 0.880
31. H05C05.2 H05C05.2 3688 7.533 0.927 0.968 0.929 0.968 0.966 0.961 0.901 0.913
32. Y75B7AL.4 rga-4 7903 7.531 0.950 0.957 0.935 0.957 0.952 0.959 0.917 0.904 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_001041201]
33. T07E3.5 brc-2 3212 7.53 0.952 0.977 0.975 0.977 0.941 0.879 0.890 0.939 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
34. Y49E10.1 rpt-6 7806 7.523 0.953 0.953 0.971 0.953 0.979 0.921 0.915 0.878 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
35. Y45F10D.9 sas-6 9563 7.519 0.944 0.978 0.976 0.978 0.956 0.904 0.917 0.866 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
36. F29G9.5 rpt-2 18618 7.511 0.949 0.957 0.964 0.957 0.981 0.914 0.886 0.903 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
37. R12E2.3 rpn-8 11194 7.505 0.942 0.971 0.941 0.971 0.975 0.923 0.908 0.874 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
38. K04F10.4 bli-4 9790 7.505 0.970 0.968 0.937 0.968 0.940 0.968 0.851 0.903 Endoprotease bli-4 [Source:UniProtKB/Swiss-Prot;Acc:P51559]
39. C01H6.5 nhr-23 6765 7.504 0.933 0.974 0.972 0.974 0.969 0.908 0.856 0.918 Nuclear hormone receptor family member nhr-23 [Source:UniProtKB/Swiss-Prot;Acc:P41828]
40. C32F10.1 obr-4 7473 7.501 0.976 0.976 0.977 0.976 0.891 0.972 0.840 0.893 Oxysterol-binding protein [Source:RefSeq peptide;Acc:NP_491691]
41. F30A10.10 usp-48 11536 7.496 0.941 0.977 0.967 0.977 0.984 0.896 0.863 0.891 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
42. F29D11.2 capg-1 9440 7.494 0.936 0.965 0.954 0.965 0.955 0.970 0.853 0.896 CAP-G condensin subunit [Source:RefSeq peptide;Acc:NP_492128]
43. C23G10.4 rpn-2 17587 7.494 0.922 0.943 0.968 0.943 0.969 0.964 0.868 0.917 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
44. F16A11.3 ppfr-1 12640 7.492 0.951 0.966 0.949 0.966 0.968 0.943 0.883 0.866 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
45. C34G6.7 stam-1 9506 7.491 0.962 0.970 0.977 0.970 0.917 0.979 0.842 0.874 Signal transducing adapter molecule 1 [Source:UniProtKB/Swiss-Prot;Acc:O01498]
46. F23C8.4 ubxn-1 25368 7.49 0.970 0.963 0.972 0.963 0.949 0.903 0.895 0.875 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
47. M03D4.1 zen-4 8185 7.489 0.943 0.977 0.981 0.977 0.953 0.889 0.903 0.866 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
48. W08F4.8 cdc-37 23424 7.485 0.951 0.968 0.955 0.968 0.973 0.924 0.839 0.907 Probable Hsp90 co-chaperone cdc37 [Source:UniProtKB/Swiss-Prot;Acc:O02108]
49. M04F3.1 rpa-2 4944 7.483 0.959 0.975 0.958 0.975 0.965 0.937 0.849 0.865 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
50. Y48E1B.12 csc-1 5135 7.478 0.924 0.947 0.967 0.947 0.960 0.955 0.872 0.906 Chromosome segregation and cytokinesis defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O45952]
51. F59E12.5 npl-4.2 5567 7.477 0.967 0.961 0.986 0.961 0.973 0.930 0.856 0.843 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
52. C47B2.3 tba-2 31086 7.477 0.959 0.952 0.947 0.952 0.901 0.955 0.909 0.902 Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
53. K02B12.3 sec-12 3590 7.473 0.973 0.959 0.945 0.959 0.957 0.936 0.887 0.857 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_492305]
54. C05D11.7 atgl-1 4096 7.471 0.908 0.983 0.959 0.983 0.946 0.948 0.828 0.916 Adipose TriGlyceride Lipase [Source:RefSeq peptide;Acc:NP_741196]
55. T05A6.2 cki-2 13153 7.47 0.933 0.971 0.973 0.971 0.929 0.921 0.890 0.882 CKI family (Cyclin-dependent Kinase Inhibitor) [Source:RefSeq peptide;Acc:NP_001022309]
56. C02F5.1 knl-1 6637 7.47 0.937 0.962 0.971 0.962 0.982 0.893 0.855 0.908 Kinetochore null protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34278]
57. C03E10.4 gly-20 10739 7.464 0.936 0.985 0.962 0.985 0.955 0.912 0.847 0.882 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
58. C34C12.3 pph-6 12139 7.458 0.924 0.953 0.916 0.953 0.961 0.929 0.949 0.873 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
59. F10G7.8 rpn-5 16014 7.455 0.946 0.962 0.976 0.962 0.970 0.929 0.876 0.834 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
60. T03F1.1 uba-5 11792 7.452 0.939 0.956 0.957 0.956 0.959 0.969 0.836 0.880 Ubiquitin-like modifier-activating enzyme 5 [Source:UniProtKB/Swiss-Prot;Acc:P91430]
61. W02B12.2 rsp-2 14764 7.45 0.978 0.976 0.942 0.976 0.960 0.875 0.871 0.872 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
62. K02D10.5 snap-29 8184 7.449 0.944 0.944 0.923 0.944 0.936 0.968 0.883 0.907 Soluble NSF attachment protein 29 [Source:UniProtKB/Swiss-Prot;Acc:P83351]
63. K01G5.7 tbb-1 26039 7.448 0.970 0.961 0.940 0.961 0.919 0.968 0.859 0.870 TuBulin, Beta [Source:RefSeq peptide;Acc:NP_499367]
64. T05G5.8 vps-53 3157 7.448 0.960 0.938 0.985 0.938 0.957 0.906 0.885 0.879 Vacuolar protein sorting-associated protein 53 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34561]
65. C06A1.1 cdc-48.1 52743 7.444 0.959 0.972 0.975 0.972 0.976 0.886 0.812 0.892 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
66. ZK20.5 rpn-12 9173 7.443 0.954 0.961 0.920 0.961 0.961 0.929 0.896 0.861 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
67. T27F2.3 bir-1 4216 7.443 0.976 0.940 0.972 0.940 0.959 0.965 0.828 0.863 BIR (baculovirus inhibitory repeat) family [Source:RefSeq peptide;Acc:NP_505949]
68. T12A2.8 gen-1 10490 7.441 0.931 0.972 0.980 0.972 0.977 0.903 0.877 0.829 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
69. T16H12.5 bath-43 10021 7.438 0.950 0.976 0.986 0.976 0.974 0.917 0.834 0.825 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
70. C07G1.5 hgrs-1 6062 7.438 0.932 0.951 0.943 0.951 0.914 0.983 0.870 0.894 Hepatocyte Growth factor-Regulated TK Substrate (HRS) family [Source:RefSeq peptide;Acc:NP_501375]
71. ZK632.7 panl-3 5387 7.438 0.963 0.962 0.978 0.962 0.978 0.896 0.828 0.871 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
72. F55B12.3 sel-10 10304 7.435 0.970 0.979 0.956 0.979 0.967 0.864 0.832 0.888 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
73. F01F1.1 hpo-10 3100 7.433 0.922 0.925 0.914 0.925 0.941 0.962 0.938 0.906
74. Y110A2AR.2 ubc-15 15884 7.433 0.918 0.943 0.935 0.943 0.907 0.974 0.917 0.896 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_494397]
75. ZK858.7 ZK858.7 2817 7.43 0.978 0.969 0.971 0.969 0.984 0.875 0.835 0.849
76. B0348.6 ife-3 26859 7.427 0.959 0.963 0.937 0.963 0.965 0.859 0.891 0.890 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
77. Y43F4B.6 klp-19 13220 7.426 0.931 0.949 0.974 0.949 0.966 0.914 0.817 0.926 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
78. Y105E8B.4 bath-40 6638 7.425 0.899 0.923 0.953 0.923 0.985 0.974 0.889 0.879 BTB and MATH domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9NF14]
79. C14A4.11 ccm-3 3646 7.425 0.915 0.964 0.928 0.964 0.935 0.919 0.902 0.898 Programmed cell death protein 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q17958]
80. M03E7.5 memb-2 2568 7.424 0.968 0.932 0.931 0.932 0.908 0.962 0.869 0.922 Golgi SNAP receptor complex member 2 [Source:RefSeq peptide;Acc:NP_504484]
81. ZK40.1 acl-9 4364 7.424 0.973 0.962 0.964 0.962 0.952 0.971 0.847 0.793 ACyLtransferase-like [Source:RefSeq peptide;Acc:NP_504644]
82. D1037.4 rab-8 14097 7.417 0.968 0.976 0.978 0.976 0.972 0.888 0.840 0.819 RAB family [Source:RefSeq peptide;Acc:NP_491199]
83. F44F4.2 egg-3 5572 7.416 0.921 0.962 0.970 0.962 0.979 0.903 0.877 0.842 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_496341]
84. F29B9.4 psr-1 4355 7.415 0.942 0.955 0.966 0.955 0.901 0.976 0.850 0.870 Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI4]
85. T09E8.1 noca-1 12494 7.414 0.909 0.979 0.967 0.979 0.975 0.912 0.833 0.860 NOn-Centrosomal microtubule Array [Source:RefSeq peptide;Acc:NP_872199]
86. K08E3.6 cyk-4 8158 7.41 0.948 0.970 0.966 0.970 0.954 0.904 0.817 0.881 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
87. F30A10.6 sac-1 4596 7.41 0.950 0.953 0.947 0.953 0.968 0.951 0.784 0.904 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
88. F32D1.9 fipp-1 10239 7.409 0.953 0.965 0.950 0.965 0.957 0.841 0.880 0.898 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
89. K08F9.2 aipl-1 4352 7.406 0.950 0.967 0.970 0.967 0.938 0.883 0.924 0.807 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
90. ZK177.6 fzy-1 7330 7.404 0.945 0.971 0.988 0.971 0.896 0.974 0.792 0.867 WD repeat-containing protein fzy-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09373]
91. F20D12.4 czw-1 2729 7.404 0.962 0.934 0.953 0.934 0.983 0.852 0.866 0.920 Caenorhabditis Zeste White 10 (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_501327]
92. F49D11.9 tag-296 7973 7.401 0.943 0.986 0.973 0.986 0.978 0.880 0.820 0.835
93. T12C9.7 T12C9.7 4155 7.4 0.932 0.961 0.958 0.961 0.923 0.929 0.843 0.893
94. R74.4 dnj-16 3492 7.399 0.925 0.941 0.932 0.941 0.968 0.886 0.902 0.904 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001254890]
95. E04F6.5 acdh-12 6267 7.398 0.945 0.955 0.961 0.955 0.927 0.965 0.793 0.897 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_001022062]
96. T09B4.2 T09B4.2 2820 7.394 0.967 0.945 0.961 0.945 0.978 0.928 0.779 0.891
97. ZK520.4 cul-2 6732 7.393 0.938 0.972 0.939 0.972 0.974 0.890 0.857 0.851 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
98. ZK1055.1 hcp-1 5565 7.392 0.916 0.935 0.959 0.935 0.883 0.971 0.884 0.909 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_504677]
99. Y110A2AR.3 Y110A2AR.3 7003 7.39 0.957 0.956 0.967 0.956 0.965 0.924 0.869 0.796
100. R04F11.5 R04F11.5 4201 7.389 0.937 0.933 0.958 0.933 0.967 0.873 0.876 0.912

There are 2388 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA