C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T12A2.8

Gene ID Gene Name Reads Transcripts Annotation
T12A2.8 gen-1 10490 T12A2.8.1, T12A2.8.2 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]

Genes with expression patterns similar to T12A2.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T12A2.8 gen-1 10490 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
2. ZK632.7 panl-3 5387 7.737 0.970 0.975 0.975 0.975 0.981 0.987 0.921 0.953 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
3. F32B6.8 tbc-3 9252 7.707 0.948 0.972 0.982 0.972 0.980 0.985 0.936 0.932 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
4. F49D11.9 tag-296 7973 7.706 0.956 0.978 0.977 0.978 0.976 0.980 0.952 0.909
5. F23C8.4 ubxn-1 25368 7.699 0.964 0.963 0.969 0.963 0.970 0.972 0.971 0.927 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
6. C06A1.1 cdc-48.1 52743 7.696 0.944 0.976 0.975 0.976 0.974 0.988 0.933 0.930 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
7. T16H12.5 bath-43 10021 7.69 0.983 0.986 0.972 0.986 0.982 0.985 0.872 0.924 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
8. ZK858.7 ZK858.7 2817 7.685 0.955 0.964 0.959 0.964 0.981 0.980 0.941 0.941
9. R12E2.3 rpn-8 11194 7.669 0.945 0.978 0.963 0.978 0.976 0.982 0.939 0.908 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
10. T22D1.9 rpn-1 25674 7.666 0.954 0.971 0.973 0.971 0.974 0.968 0.916 0.939 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
11. M03D4.1 zen-4 8185 7.665 0.972 0.984 0.976 0.984 0.971 0.939 0.939 0.900 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
12. C41C4.8 cdc-48.2 7843 7.664 0.970 0.958 0.967 0.958 0.964 0.973 0.959 0.915 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
13. F56H1.4 rpt-5 16849 7.661 0.962 0.965 0.963 0.965 0.990 0.982 0.944 0.890 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
14. C03E10.4 gly-20 10739 7.66 0.979 0.977 0.965 0.977 0.961 0.960 0.946 0.895 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
15. F29G9.5 rpt-2 18618 7.649 0.919 0.978 0.964 0.978 0.976 0.985 0.946 0.903 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
16. F30A10.10 usp-48 11536 7.649 0.956 0.977 0.970 0.977 0.985 0.973 0.941 0.870 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
17. B0205.3 rpn-10 16966 7.648 0.941 0.977 0.966 0.977 0.970 0.955 0.935 0.927 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
18. C05C10.6 ufd-3 6304 7.648 0.956 0.973 0.965 0.973 0.965 0.950 0.936 0.930 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
19. C12D8.10 akt-1 12100 7.647 0.967 0.972 0.982 0.972 0.982 0.976 0.949 0.847 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
20. ZK353.8 ubxn-4 6411 7.643 0.972 0.964 0.964 0.964 0.962 0.989 0.944 0.884 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
21. F49C12.8 rpn-7 15688 7.638 0.910 0.975 0.969 0.975 0.987 0.974 0.936 0.912 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
22. D1022.7 aka-1 10681 7.638 0.968 0.976 0.977 0.976 0.973 0.938 0.915 0.915 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
23. C50C3.8 bath-42 18053 7.637 0.961 0.975 0.978 0.975 0.986 0.976 0.935 0.851 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
24. Y45F10D.9 sas-6 9563 7.636 0.969 0.969 0.988 0.969 0.971 0.963 0.930 0.877 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
25. C23G10.4 rpn-2 17587 7.635 0.970 0.966 0.985 0.966 0.977 0.967 0.881 0.923 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
26. Y105E8B.4 bath-40 6638 7.634 0.969 0.946 0.947 0.946 0.982 0.968 0.929 0.947 BTB and MATH domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9NF14]
27. K02B2.3 mcu-1 20448 7.63 0.959 0.974 0.951 0.974 0.981 0.958 0.907 0.926 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
28. F23F1.8 rpt-4 14303 7.627 0.927 0.966 0.976 0.966 0.977 0.975 0.964 0.876 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
29. F42A9.2 lin-49 6940 7.626 0.972 0.955 0.983 0.955 0.968 0.955 0.905 0.933
30. K08E3.6 cyk-4 8158 7.623 0.970 0.977 0.960 0.977 0.965 0.969 0.931 0.874 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
31. F20G4.3 nmy-2 27210 7.621 0.964 0.981 0.980 0.981 0.965 0.969 0.906 0.875 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
32. Y49E10.1 rpt-6 7806 7.618 0.945 0.948 0.968 0.948 0.983 0.964 0.956 0.906 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
33. K07A1.8 ile-1 16218 7.617 0.966 0.959 0.951 0.959 0.977 0.977 0.943 0.885 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
34. F25H2.8 ubc-25 12368 7.616 0.979 0.960 0.971 0.960 0.972 0.971 0.909 0.894 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
35. D2030.2 D2030.2 6741 7.614 0.961 0.966 0.963 0.966 0.979 0.983 0.959 0.837
36. D1037.4 rab-8 14097 7.614 0.966 0.962 0.981 0.962 0.987 0.948 0.910 0.898 RAB family [Source:RefSeq peptide;Acc:NP_491199]
37. Y59A8A.3 tcc-1 20646 7.606 0.976 0.971 0.983 0.971 0.985 0.961 0.919 0.840 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
38. F42G9.5 alh-11 5722 7.604 0.962 0.976 0.972 0.976 0.954 0.966 0.934 0.864 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
39. C17D12.1 dhhc-7 6002 7.602 0.975 0.975 0.950 0.975 0.981 0.916 0.921 0.909 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
40. F59E12.5 npl-4.2 5567 7.602 0.944 0.946 0.984 0.946 0.976 0.956 0.909 0.941 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
41. F01G4.1 swsn-4 14710 7.6 0.974 0.968 0.980 0.968 0.972 0.952 0.929 0.857 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
42. ZK287.5 rbx-1 13546 7.6 0.962 0.962 0.984 0.962 0.952 0.983 0.923 0.872 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
43. Y43F4B.6 klp-19 13220 7.599 0.986 0.935 0.980 0.935 0.960 0.963 0.954 0.886 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
44. F11A10.1 lex-1 13720 7.598 0.968 0.963 0.983 0.963 0.969 0.925 0.921 0.906 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
45. Y110A7A.17 mat-1 3797 7.597 0.986 0.946 0.966 0.946 0.954 0.972 0.926 0.901 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
46. Y110A2AR.3 Y110A2AR.3 7003 7.595 0.971 0.971 0.963 0.971 0.981 0.949 0.942 0.847
47. T05G5.8 vps-53 3157 7.594 0.954 0.942 0.967 0.942 0.982 0.967 0.958 0.882 Vacuolar protein sorting-associated protein 53 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34561]
48. F10G7.8 rpn-5 16014 7.594 0.939 0.962 0.977 0.962 0.986 0.984 0.926 0.858 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
49. F49E8.3 pam-1 25149 7.591 0.953 0.942 0.974 0.942 0.969 0.967 0.943 0.901
50. D2085.3 D2085.3 2166 7.591 0.939 0.928 0.985 0.928 0.968 0.977 0.972 0.894
51. F55B12.3 sel-10 10304 7.59 0.943 0.969 0.971 0.969 0.974 0.982 0.894 0.888 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
52. C07A9.3 tlk-1 12572 7.588 0.978 0.987 0.972 0.987 0.955 0.948 0.892 0.869 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
53. C13B4.2 usp-14 9000 7.587 0.975 0.977 0.986 0.977 0.939 0.967 0.905 0.861 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
54. F53C11.5 F53C11.5 7387 7.586 0.945 0.959 0.968 0.959 0.966 0.961 0.949 0.879
55. T20F5.2 pbs-4 8985 7.585 0.914 0.972 0.977 0.972 0.965 0.967 0.934 0.884 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
56. F23F12.6 rpt-3 6433 7.585 0.918 0.960 0.968 0.960 0.986 0.964 0.924 0.905 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
57. F16A11.3 ppfr-1 12640 7.585 0.963 0.969 0.956 0.969 0.963 0.981 0.949 0.835 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
58. F20D12.4 czw-1 2729 7.584 0.978 0.964 0.945 0.964 0.981 0.971 0.939 0.842 Caenorhabditis Zeste White 10 (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_501327]
59. Y71F9B.7 plk-2 6594 7.583 0.954 0.959 0.972 0.959 0.974 0.961 0.945 0.859 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
60. C02F5.9 pbs-6 20120 7.581 0.924 0.968 0.967 0.968 0.972 0.967 0.925 0.890 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
61. K10B2.5 ani-2 11397 7.579 0.974 0.960 0.983 0.960 0.975 0.952 0.932 0.843 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
62. C52E4.4 rpt-1 16724 7.579 0.916 0.951 0.956 0.951 0.982 0.988 0.928 0.907 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
63. W08F4.8 cdc-37 23424 7.578 0.931 0.971 0.957 0.971 0.962 0.981 0.929 0.876 Probable Hsp90 co-chaperone cdc37 [Source:UniProtKB/Swiss-Prot;Acc:O02108]
64. C54G10.2 rfc-1 8814 7.578 0.955 0.961 0.984 0.961 0.975 0.956 0.928 0.858 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
65. Y50E8A.4 unc-61 8599 7.577 0.977 0.970 0.979 0.970 0.949 0.910 0.939 0.883
66. F44F4.2 egg-3 5572 7.573 0.976 0.962 0.958 0.962 0.977 0.956 0.950 0.832 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_496341]
67. Y17G7B.2 ash-2 5452 7.573 0.952 0.966 0.981 0.966 0.978 0.963 0.938 0.829 ASH histone methyltransferase complex subunit (Drosophila absent, small or homeotic discs) [Source:RefSeq peptide;Acc:NP_496555]
68. ZK520.4 cul-2 6732 7.573 0.973 0.941 0.959 0.941 0.972 0.971 0.923 0.893 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
69. C02F5.1 knl-1 6637 7.572 0.964 0.962 0.971 0.962 0.982 0.966 0.911 0.854 Kinetochore null protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34278]
70. Y94H6A.9 ubxn-2 7082 7.571 0.937 0.961 0.958 0.961 0.957 0.970 0.955 0.872 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
71. W09D10.2 tat-3 11820 7.57 0.963 0.937 0.973 0.937 0.981 0.966 0.897 0.916 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
72. K10B2.1 lin-23 15896 7.569 0.980 0.957 0.984 0.957 0.969 0.957 0.917 0.848 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
73. R01H2.6 ubc-18 13394 7.568 0.930 0.970 0.977 0.970 0.958 0.942 0.927 0.894 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
74. K07C11.2 air-1 13838 7.565 0.982 0.982 0.976 0.982 0.977 0.947 0.871 0.848 Aurora/Ipl1 Related kinase [Source:RefSeq peptide;Acc:NP_505119]
75. W02B12.2 rsp-2 14764 7.562 0.920 0.974 0.952 0.974 0.974 0.969 0.936 0.863 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
76. T09E8.1 noca-1 12494 7.562 0.961 0.988 0.962 0.988 0.966 0.970 0.845 0.882 NOn-Centrosomal microtubule Array [Source:RefSeq peptide;Acc:NP_872199]
77. DY3.2 lmn-1 22449 7.561 0.924 0.979 0.957 0.979 0.954 0.925 0.963 0.880 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
78. R11D1.1 R11D1.1 2431 7.561 0.945 0.920 0.963 0.920 0.977 0.981 0.958 0.897
79. ZC404.3 spe-39 7397 7.559 0.980 0.940 0.987 0.940 0.956 0.973 0.892 0.891 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
80. F30A10.6 sac-1 4596 7.559 0.909 0.959 0.929 0.959 0.977 0.980 0.914 0.932 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
81. F09G2.8 F09G2.8 2899 7.555 0.929 0.955 0.981 0.955 0.975 0.951 0.919 0.890 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
82. C36E8.5 tbb-2 19603 7.552 0.950 0.964 0.977 0.964 0.962 0.959 0.852 0.924 Tubulin beta-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P52275]
83. T09B4.2 T09B4.2 2820 7.55 0.938 0.940 0.967 0.940 0.969 0.984 0.901 0.911
84. M18.8 dhhc-6 7929 7.549 0.966 0.957 0.973 0.957 0.951 0.957 0.916 0.872 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_502302]
85. T27A3.2 usp-5 11388 7.548 0.950 0.964 0.962 0.964 0.974 0.968 0.930 0.836 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
86. M18.7 aly-3 7342 7.547 0.950 0.965 0.970 0.965 0.959 0.953 0.903 0.882 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_001076697]
87. ZC404.9 gck-2 8382 7.543 0.947 0.968 0.969 0.968 0.949 0.945 0.879 0.918 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
88. T12F5.5 larp-5 16417 7.543 0.967 0.983 0.972 0.983 0.964 0.941 0.904 0.829 LARP (RNA binding La related protein) homolog [Source:RefSeq peptide;Acc:NP_491209]
89. F52E1.13 lmd-3 25047 7.543 0.930 0.982 0.950 0.982 0.970 0.943 0.903 0.883 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
90. ZK1248.10 tbc-2 5875 7.542 0.965 0.973 0.963 0.973 0.943 0.966 0.916 0.843 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
91. M04F3.1 rpa-2 4944 7.542 0.968 0.948 0.961 0.948 0.977 0.962 0.910 0.868 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
92. C04A2.7 dnj-5 9618 7.542 0.977 0.989 0.967 0.989 0.947 0.954 0.898 0.821 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
93. F44E7.5 F44E7.5 1980 7.541 0.965 0.935 0.958 0.935 0.946 0.963 0.926 0.913
94. T20G5.1 chc-1 32620 7.538 0.958 0.963 0.941 0.963 0.957 0.936 0.911 0.909 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
95. C34C12.3 pph-6 12139 7.536 0.921 0.964 0.932 0.964 0.981 0.973 0.925 0.876 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
96. T24C4.6 zer-1 16051 7.535 0.964 0.982 0.984 0.982 0.961 0.916 0.885 0.861 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
97. C02F4.1 ced-5 9096 7.534 0.957 0.972 0.977 0.972 0.964 0.963 0.874 0.855 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
98. F59E12.4 npl-4.1 3224 7.533 0.923 0.952 0.929 0.952 0.962 0.965 0.928 0.922 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495097]
99. C30C11.2 rpn-3 14437 7.532 0.941 0.952 0.971 0.952 0.972 0.988 0.900 0.856 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
100. ZK20.5 rpn-12 9173 7.532 0.906 0.950 0.949 0.950 0.973 0.988 0.931 0.885 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]

There are 2489 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA