C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F56A3.2

Gene ID Gene Name Reads Transcripts Annotation
F56A3.2 slx-1 1578 F56A3.2 Structure-specific endonuclease subunit SLX1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91351]

Genes with expression patterns similar to F56A3.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56A3.2 slx-1 1578 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Structure-specific endonuclease subunit SLX1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91351]
2. C50C3.8 bath-42 18053 7.53 0.959 0.971 0.906 0.971 0.947 0.947 0.898 0.931 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
3. F55B12.3 sel-10 10304 7.522 0.940 0.974 0.921 0.974 0.938 0.948 0.891 0.936 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
4. B0348.6 ife-3 26859 7.514 0.941 0.966 0.893 0.966 0.937 0.977 0.892 0.942 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
5. F30A10.10 usp-48 11536 7.511 0.935 0.968 0.928 0.968 0.952 0.982 0.884 0.894 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
6. K08E3.6 cyk-4 8158 7.509 0.967 0.967 0.943 0.967 0.943 0.967 0.869 0.886 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
7. F23F1.8 rpt-4 14303 7.503 0.936 0.971 0.918 0.971 0.958 0.936 0.906 0.907 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
8. Y54G9A.6 bub-3 9123 7.497 0.935 0.961 0.926 0.961 0.924 0.977 0.868 0.945 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
9. C14B9.4 plk-1 18785 7.497 0.976 0.962 0.908 0.962 0.957 0.949 0.880 0.903 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
10. Y50E8A.4 unc-61 8599 7.495 0.938 0.966 0.888 0.966 0.974 0.938 0.900 0.925
11. K11D2.3 unc-101 5587 7.493 0.927 0.960 0.856 0.960 0.978 0.945 0.923 0.944 AP-1 complex subunit mu-1-I [Source:UniProtKB/Swiss-Prot;Acc:P35602]
12. T05G5.3 cdk-1 14112 7.488 0.953 0.968 0.927 0.968 0.951 0.987 0.785 0.949 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
13. K08D12.1 pbs-1 21677 7.487 0.937 0.973 0.925 0.973 0.937 0.926 0.868 0.948 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
14. F18A1.5 rpa-1 3109 7.485 0.936 0.976 0.905 0.976 0.957 0.941 0.878 0.916 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
15. T07E3.5 brc-2 3212 7.484 0.972 0.963 0.936 0.963 0.919 0.968 0.895 0.868 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
16. C12D8.10 akt-1 12100 7.471 0.942 0.956 0.907 0.956 0.963 0.944 0.881 0.922 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
17. DY3.2 lmn-1 22449 7.469 0.935 0.966 0.888 0.966 0.967 0.937 0.865 0.945 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
18. R01H2.6 ubc-18 13394 7.467 0.927 0.961 0.915 0.961 0.953 0.960 0.858 0.932 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
19. F16D3.2 rsd-6 8211 7.465 0.922 0.982 0.919 0.982 0.930 0.956 0.800 0.974
20. Y110A7A.17 mat-1 3797 7.464 0.944 0.956 0.910 0.956 0.964 0.928 0.905 0.901 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
21. W09C5.2 unc-59 5784 7.462 0.929 0.975 0.917 0.975 0.962 0.967 0.831 0.906
22. ZK287.5 rbx-1 13546 7.461 0.958 0.961 0.896 0.961 0.919 0.949 0.908 0.909 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
23. M03D4.1 zen-4 8185 7.46 0.965 0.964 0.870 0.964 0.952 0.959 0.904 0.882 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
24. K11D9.1 klp-7 14582 7.454 0.936 0.931 0.923 0.931 0.943 0.950 0.882 0.958 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001022677]
25. W02B12.2 rsp-2 14764 7.453 0.949 0.966 0.850 0.966 0.966 0.930 0.896 0.930 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
26. Y48A6B.11 rsa-2 1931 7.449 0.925 0.963 0.926 0.963 0.938 0.976 0.819 0.939 Regulator of Spindle Assembly [Source:RefSeq peptide;Acc:NP_001022886]
27. F37A4.8 isw-1 9337 7.448 0.944 0.974 0.913 0.974 0.939 0.972 0.848 0.884 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
28. CD4.6 pas-6 18332 7.446 0.939 0.960 0.912 0.960 0.928 0.950 0.867 0.930 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
29. C30C11.2 rpn-3 14437 7.442 0.965 0.958 0.903 0.958 0.920 0.930 0.864 0.944 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
30. C09G4.1 hyl-1 8815 7.435 0.956 0.954 0.889 0.954 0.935 0.907 0.898 0.942 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
31. F39H11.5 pbs-7 13631 7.434 0.946 0.962 0.904 0.962 0.943 0.931 0.840 0.946 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
32. C29E4.2 kle-2 5527 7.433 0.970 0.966 0.918 0.966 0.935 0.919 0.850 0.909 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
33. C25A1.5 C25A1.5 9135 7.432 0.930 0.943 0.874 0.943 0.977 0.953 0.852 0.960
34. ZK20.3 rad-23 35070 7.432 0.950 0.974 0.895 0.974 0.951 0.920 0.818 0.950
35. C02F5.9 pbs-6 20120 7.429 0.947 0.959 0.887 0.959 0.939 0.945 0.860 0.933 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
36. Y49E10.19 ani-1 12757 7.429 0.941 0.970 0.868 0.970 0.973 0.957 0.811 0.939 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
37. F12F6.3 rib-1 10524 7.428 0.924 0.963 0.939 0.963 0.938 0.976 0.819 0.906 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
38. F10G7.8 rpn-5 16014 7.425 0.939 0.964 0.905 0.964 0.950 0.928 0.862 0.913 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
39. F31D4.3 fkb-6 21313 7.425 0.916 0.946 0.876 0.946 0.960 0.977 0.853 0.951 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
40. B0334.5 B0334.5 4713 7.421 0.921 0.953 0.925 0.953 0.962 0.918 0.871 0.918
41. F25H2.8 ubc-25 12368 7.419 0.925 0.953 0.936 0.953 0.966 0.934 0.834 0.918 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
42. F12F6.5 srgp-1 9048 7.419 0.882 0.964 0.939 0.964 0.967 0.974 0.820 0.909 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
43. F56H1.4 rpt-5 16849 7.417 0.951 0.973 0.917 0.973 0.919 0.906 0.917 0.861 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
44. T27A3.2 usp-5 11388 7.416 0.967 0.967 0.908 0.967 0.909 0.918 0.885 0.895 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
45. T20F5.2 pbs-4 8985 7.415 0.928 0.962 0.901 0.962 0.938 0.924 0.883 0.917 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
46. F58G11.1 letm-1 13414 7.411 0.951 0.965 0.873 0.965 0.948 0.906 0.866 0.937 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
47. ZC404.9 gck-2 8382 7.41 0.952 0.975 0.910 0.975 0.924 0.968 0.772 0.934 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
48. Y43F4B.6 klp-19 13220 7.409 0.956 0.932 0.931 0.932 0.957 0.952 0.884 0.865 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
49. D2085.3 D2085.3 2166 7.409 0.951 0.908 0.929 0.908 0.941 0.929 0.908 0.935
50. T12E12.1 T12E12.1 7629 7.409 0.967 0.965 0.919 0.965 0.872 0.935 0.888 0.898 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
51. H19N07.2 math-33 10570 7.408 0.936 0.956 0.892 0.956 0.963 0.947 0.835 0.923 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
52. ZC168.3 orc-5 2186 7.407 0.933 0.954 0.930 0.954 0.910 0.950 0.884 0.892 ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_001255506]
53. Y94H6A.9 ubxn-2 7082 7.406 0.913 0.949 0.903 0.949 0.951 0.944 0.876 0.921 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
54. C06A1.1 cdc-48.1 52743 7.406 0.946 0.965 0.907 0.965 0.931 0.912 0.869 0.911 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
55. Y40B10A.1 lbp-9 30119 7.404 0.914 0.944 0.890 0.944 0.940 0.950 0.881 0.941 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
56. T10H9.3 syx-18 2416 7.403 0.924 0.948 0.896 0.948 0.929 0.954 0.887 0.917 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
57. K10B2.5 ani-2 11397 7.403 0.909 0.964 0.905 0.964 0.958 0.966 0.811 0.926 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
58. M7.2 klc-1 4706 7.403 0.943 0.972 0.924 0.972 0.942 0.953 0.865 0.832 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
59. F23C8.4 ubxn-1 25368 7.401 0.941 0.941 0.883 0.941 0.931 0.967 0.887 0.910 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
60. F16A11.3 ppfr-1 12640 7.4 0.959 0.965 0.909 0.965 0.931 0.938 0.849 0.884 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
61. C03E10.4 gly-20 10739 7.399 0.958 0.968 0.847 0.968 0.932 0.970 0.889 0.867 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
62. C13B4.2 usp-14 9000 7.396 0.957 0.962 0.882 0.962 0.925 0.949 0.841 0.918 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
63. B0205.1 B0205.1 2403 7.396 0.967 0.957 0.928 0.957 0.888 0.946 0.826 0.927
64. Y92C3B.2 uaf-1 14981 7.394 0.958 0.962 0.861 0.962 0.941 0.937 0.828 0.945 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
65. D2089.1 rsp-7 11057 7.394 0.958 0.962 0.919 0.962 0.951 0.894 0.837 0.911 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
66. Y46G5A.12 vps-2 5685 7.394 0.950 0.951 0.878 0.951 0.953 0.917 0.838 0.956 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
67. ZC404.3 spe-39 7397 7.393 0.962 0.942 0.910 0.942 0.931 0.929 0.865 0.912 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
68. F49E8.3 pam-1 25149 7.393 0.935 0.936 0.908 0.936 0.950 0.937 0.860 0.931
69. F38A5.13 dnj-11 19678 7.393 0.893 0.959 0.918 0.959 0.933 0.951 0.833 0.947 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
70. F49D11.9 tag-296 7973 7.392 0.922 0.961 0.930 0.961 0.939 0.908 0.859 0.912
71. T05F1.6 hsr-9 13312 7.39 0.967 0.977 0.906 0.977 0.908 0.955 0.770 0.930
72. W01B6.9 ndc-80 4670 7.39 0.955 0.961 0.913 0.961 0.896 0.967 0.808 0.929 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
73. C17E4.5 pabp-2 12843 7.388 0.939 0.961 0.865 0.961 0.978 0.922 0.823 0.939 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
74. W03F9.5 ttb-1 8682 7.387 0.956 0.963 0.911 0.963 0.912 0.947 0.804 0.931 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
75. ZK20.5 rpn-12 9173 7.386 0.943 0.958 0.928 0.958 0.936 0.910 0.927 0.826 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
76. C13F10.6 C13F10.6 1811 7.385 0.896 0.958 0.921 0.958 0.957 0.944 0.860 0.891
77. T06D8.6 cchl-1 26292 7.384 0.938 0.966 0.858 0.966 0.962 0.948 0.798 0.948 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
78. W05B10.1 his-74 21926 7.383 0.940 0.936 0.882 0.936 0.940 0.956 0.884 0.909 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
79. F32D1.9 fipp-1 10239 7.383 0.955 0.959 0.877 0.959 0.931 0.948 0.887 0.867 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
80. T21C9.1 mics-1 3718 7.381 0.961 0.962 0.853 0.962 0.974 0.933 0.911 0.825 MItoChondrial Scaffolding protei [Source:RefSeq peptide;Acc:NP_505712]
81. C47D12.8 xpf-1 6173 7.38 0.924 0.957 0.923 0.957 0.916 0.986 0.844 0.873 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
82. Y43C5A.6 rad-51 5327 7.38 0.899 0.956 0.935 0.956 0.913 0.921 0.861 0.939 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
83. F58B6.3 par-2 3914 7.378 0.949 0.967 0.899 0.967 0.948 0.906 0.818 0.924
84. T10B5.6 knl-3 3516 7.378 0.936 0.967 0.914 0.967 0.900 0.981 0.772 0.941 Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
85. T21E12.4 dhc-1 20370 7.377 0.923 0.952 0.914 0.952 0.956 0.927 0.815 0.938 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
86. F35B12.5 sas-5 4606 7.376 0.944 0.952 0.934 0.952 0.923 0.958 0.784 0.929 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
87. C34G6.5 cdc-7 2956 7.376 0.939 0.947 0.897 0.947 0.960 0.961 0.838 0.887 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491705]
88. F44A2.1 tag-153 16535 7.374 0.936 0.972 0.894 0.972 0.906 0.945 0.821 0.928
89. K10B2.1 lin-23 15896 7.374 0.948 0.957 0.895 0.957 0.936 0.950 0.839 0.892 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
90. M04F3.1 rpa-2 4944 7.373 0.976 0.976 0.912 0.976 0.919 0.940 0.819 0.855 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
91. F41E6.4 smk-1 22394 7.371 0.915 0.958 0.925 0.958 0.946 0.936 0.812 0.921 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
92. Y76A2B.1 pod-1 12528 7.37 0.897 0.956 0.921 0.956 0.932 0.947 0.853 0.908 POD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDS2]
93. C52E4.4 rpt-1 16724 7.369 0.927 0.959 0.877 0.959 0.913 0.959 0.841 0.934 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
94. C36B1.4 pas-4 13140 7.367 0.913 0.955 0.856 0.955 0.951 0.917 0.881 0.939 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
95. F21H12.6 tpp-2 4159 7.367 0.955 0.958 0.841 0.958 0.945 0.916 0.837 0.957 Tripeptidyl-peptidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09541]
96. F35G12.8 smc-4 6202 7.366 0.923 0.969 0.935 0.969 0.890 0.921 0.841 0.918 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
97. F26E4.8 tba-1 26935 7.364 0.930 0.963 0.913 0.963 0.951 0.905 0.797 0.942 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_001251213]
98. F11A10.1 lex-1 13720 7.364 0.912 0.958 0.918 0.958 0.936 0.980 0.833 0.869 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
99. K07C5.8 cash-1 10523 7.362 0.944 0.974 0.907 0.974 0.903 0.958 0.850 0.852 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
100. R12E2.3 rpn-8 11194 7.361 0.928 0.969 0.885 0.969 0.933 0.938 0.848 0.891 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]

There are 1625 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA