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Results for F28C6.4

Gene ID Gene Name Reads Transcripts Annotation
F28C6.4 F28C6.4 694 F28C6.4a.1, F28C6.4a.2, F28C6.4a.3, F28C6.4b.1, F28C6.4b.2, F28C6.4b.3

Genes with expression patterns similar to F28C6.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28C6.4 F28C6.4 694 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. C06G1.4 ain-1 10090 5.966 0.775 0.616 0.717 0.616 0.807 0.951 0.715 0.769 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_510687]
3. C14F5.1 dct-1 2010 5.852 0.712 0.713 0.709 0.713 0.798 0.966 0.549 0.692 NIP3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09969]
4. ZK899.8 gap-2 2796 5.85 0.950 0.725 0.823 0.725 0.504 0.753 0.499 0.871 Ras GTPase-activating protein gap-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8MLZ5]
5. W06B11.2 puf-9 3321 5.83 0.862 0.528 0.809 0.528 0.684 0.951 0.802 0.666 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_508980]
6. H13N06.3 gob-1 6630 5.758 0.466 0.641 0.749 0.641 0.828 0.954 0.783 0.696 Trehalose-phosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q9XTQ5]
7. B0348.4 egl-8 5883 5.531 0.460 0.588 0.666 0.588 0.675 0.959 0.752 0.843 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8 [Source:UniProtKB/Swiss-Prot;Acc:G5EBH0]
8. T21D12.4 pat-6 5640 5.531 0.552 0.585 0.661 0.585 0.723 0.957 0.720 0.748 Paralyzed arrest at two-fold protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O16785]
9. M03A8.2 atg-2 3732 5.524 - 0.676 0.688 0.676 0.854 0.958 0.843 0.829 AuTophaGy (yeast Atg homolog) [Source:RefSeq peptide;Acc:NP_509145]
10. ZC376.7 atfs-1 7905 5.111 0.555 0.955 0.733 0.955 0.723 0.601 0.275 0.314 Activating Transcription Factor associated with Stress [Source:RefSeq peptide;Acc:NP_506515]
11. T14G12.3 tag-18 22633 5.105 0.245 0.503 0.631 0.503 0.766 0.965 0.728 0.764
12. ZK470.5 nck-1 2444 5.07 0.824 0.599 0.738 0.599 0.777 0.961 0.572 - NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family [Source:RefSeq peptide;Acc:NP_508706]
13. T22E5.5 mup-2 65873 5.06 0.296 0.485 0.585 0.485 0.817 0.962 0.755 0.675 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
14. F42G4.3 zyx-1 50908 5.05 0.319 0.510 0.534 0.510 0.739 0.960 0.773 0.705 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
15. F08B6.4 unc-87 108779 4.902 0.297 0.360 0.611 0.360 0.790 0.958 0.723 0.803 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
16. C18A11.7 dim-1 110263 4.811 0.305 0.402 0.544 0.402 0.755 0.966 0.705 0.732 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
17. PAR2.3 aak-1 7150 4.679 0.363 0.951 0.712 0.951 0.633 0.557 0.267 0.245 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:P45894]
18. C35C5.8 C35C5.8 0 4.67 0.713 - 0.727 - 0.775 0.951 0.730 0.774
19. B0272.4 B0272.4 811 4.618 0.820 - 0.635 - 0.757 0.962 0.634 0.810
20. Y38F1A.9 oig-2 10083 4.547 0.278 0.380 0.398 0.380 0.745 0.950 0.655 0.761 One IG domain [Source:RefSeq peptide;Acc:NP_496767]
21. F01F1.4 rabn-5 5269 4.521 0.584 0.950 0.713 0.950 0.631 0.412 0.006 0.275 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
22. B0414.8 vps-51 1515 4.423 0.375 0.950 0.632 0.950 0.547 0.532 0.080 0.357 Vacuolar protein sorting-associated protein 51 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01839]
23. C47B2.4 pbs-2 19805 4.356 0.479 0.952 0.758 0.952 0.618 0.533 0.113 -0.049 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
24. F49C12.8 rpn-7 15688 4.289 0.533 0.954 0.727 0.954 0.604 0.458 0.065 -0.006 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
25. T09B9.5 T09B9.5 0 4.229 0.919 - 0.730 - 0.797 0.959 - 0.824
26. F41E6.4 smk-1 22394 4.156 0.453 0.957 0.767 0.957 0.647 0.331 0.011 0.033 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
27. C34C12.3 pph-6 12139 4.054 0.499 0.957 0.743 0.957 0.590 0.394 -0.046 -0.040 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
28. T04A8.10 sel-13 3109 3.99 0.498 0.950 0.733 0.950 0.539 0.335 -0.094 0.079 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
29. F16D3.4 tbcd-1 2159 3.964 0.571 0.966 0.685 0.966 0.496 0.233 -0.021 0.068 TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
30. T01B7.1 T01B7.1 0 3.959 0.205 - 0.492 - 0.775 0.954 0.749 0.784
31. F57B10.11 bag-1 3395 3.906 0.431 0.951 0.705 0.951 0.645 0.295 -0.038 -0.034 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
32. C36B1.8 gls-1 8617 3.867 0.535 0.956 0.698 0.956 0.562 0.283 -0.083 -0.040 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
33. F01G4.3 skih-2 3353 3.839 0.548 0.955 0.786 0.955 0.534 0.211 -0.084 -0.066 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
34. F18E2.3 scc-3 13464 3.709 0.513 0.951 0.734 0.951 0.595 0.168 -0.115 -0.088 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
35. Y56A3A.17 npp-16 5391 3.704 0.615 0.957 0.758 0.957 0.550 0.124 -0.116 -0.141 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
36. VC5.4 mys-1 3996 3.688 0.441 0.951 0.684 0.951 0.579 0.202 -0.111 -0.009 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
37. ZK1055.1 hcp-1 5565 3.687 0.570 0.952 0.713 0.952 0.399 0.292 -0.013 -0.178 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_504677]
38. F22D6.5 prpf-4 9522 3.678 0.405 0.956 0.689 0.956 0.580 0.259 -0.091 -0.076 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
39. F56A3.3 npp-6 5425 3.631 0.536 0.952 0.718 0.952 0.477 0.194 -0.073 -0.125 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
40. T05E11.4 spo-11 2806 3.546 0.531 0.956 0.769 0.956 0.534 0.108 -0.166 -0.142 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
41. C05C8.5 C05C8.5 2655 3.458 0.465 0.958 0.674 0.958 0.473 0.144 -0.116 -0.098
42. F10G7.3 unc-85 5206 3.453 0.463 0.950 0.760 0.950 0.481 0.105 -0.147 -0.109 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
43. ZK524.2 unc-13 4177 3.435 - 0.052 0.126 0.052 0.685 0.959 0.637 0.924 Phorbol ester/diacylglycerol-binding protein unc-13 [Source:UniProtKB/Swiss-Prot;Acc:P27715]
44. T01B11.3 syx-4 1573 3.411 0.538 0.950 0.714 0.950 0.508 0.026 -0.137 -0.138 Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]
45. T27E4.3 hsp-16.48 17718 3.035 - - - - 0.797 0.952 0.616 0.670 Heat shock protein Hsp-16.48/Hsp-16.49 [Source:UniProtKB/Swiss-Prot;Acc:P02513]
46. T28F12.1 T28F12.1 232 2.596 0.913 - 0.733 - - 0.950 - -
47. C50D2.9 C50D2.9 1388 1.906 - 0.953 - 0.953 - - - -
48. F21D5.5 F21D5.5 2360 1.906 - 0.953 - 0.953 - - - -
49. D1037.1 D1037.1 4248 1.904 - 0.952 - 0.952 - - - -
50. T26A5.2 T26A5.2 5864 1.904 - 0.952 - 0.952 - - - -

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA