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Experiment herm3, section s41.

Sample reads: 37,050. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 565.00 15249.63
2. F02A9.3 far-2 388.00 10472.31 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
3. F11E6.3 F11E6.3 245.00 6612.67
4. T04C12.6 act-1 240.00 6477.72 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
5. T04C12.4 act-3 225.00 6072.86 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
6. C49F5.1 sams-1 223.00 6018.88 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
7. F02A9.2 far-1 214.00 5775.97 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
8. K02F2.2 ahcy-1 214.00 5775.97 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
9. F37A8.4 nlp-10 207.00 5587.03 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_497795]
10. F09F7.2 mlc-3 204.00 5506.06 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
11. M18.1 col-129 202.00 5452.08 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
12. F57B1.4 col-160 189.00 5101.20 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
13. T05A1.2 col-122 183.00 4939.26 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
14. C06A8.3 C06A8.3 173.00 4669.36
15. Y73B6BL.24 acp-6 158.00 4264.50 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
16. F07A5.7 unc-15 147.00 3967.60 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
17. F52D10.3 ftt-2 137.00 3697.70 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
18. K10B3.9 mai-1 137.00 3697.70 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
19. M03F4.2 act-4 135.00 3643.72 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
20. T27E9.1 ant-1.1 135.00 3643.72 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
21. F38A3.1 col-81 128.00 3454.78 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
22. F52H3.7 lec-2 128.00 3454.78 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
23. W03G11.1 col-181 128.00 3454.78 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
24. F11G11.11 col-20 127.00 3427.79 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
25. F28H1.2 cpn-3 125.00 3373.81 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
26. T11B7.3 col-118 125.00 3373.81 COLlagen [Source:RefSeq peptide;Acc:NP_001122798]
27. C24F3.6 col-124 118.00 3184.88 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
28. F11C3.3 unc-54 115.00 3103.91 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
29. C09G5.5 col-80 114.00 3076.92 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
30. Y77E11A.15 col-106 114.00 3076.92 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
31. Y5F2A.1 ttr-16 112.00 3022.94 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
32. F01G12.5 let-2 111.00 2995.95 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
33. F41F3.4 col-139 111.00 2995.95 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
34. T25F10.6 clik-1 111.00 2995.95 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
35. F45E4.8 nlp-20 109.00 2941.96 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_501244]
36. C36E6.3 mlc-1 108.00 2914.97 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
37. E04A4.7 cyc-2.1 102.00 2753.03 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
38. C04F12.4 rpl-14 95.70 2582.99 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
39. F13D12.4 alh-8 95.70 2582.99 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
40. F26F12.1 col-140 94.30 2545.20 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
41. T07C4.5 ttr-15 92.80 2504.72 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
42. R10E11.8 vha-1 91.40 2466.93 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
43. W05B2.5 col-93 91.40 2466.93 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
44. R05G6.7 vdac-1 90.00 2429.15 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
45. C23H4.1 cab-1 88.60 2391.36
46. C34F6.2 col-178 88.60 2391.36 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
47. F31E3.5 eef-1A.1 88.60 2391.36 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
48. F40F4.2 lbp-2 87.20 2353.57 Fatty acid-binding protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20224]
49. F55D10.2 rpl-25.1 87.20 2353.57 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
50. R11A5.4 pck-2 87.20 2353.57 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
51. Y82E9BR.3 Y82E9BR.3 84.40 2278.00 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
52. C01G6.1 aqp-2 78.90 2129.55 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_495972]
53. F54E7.2 rps-12 78.90 2129.55 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
54. W09C5.6 rpl-31 78.90 2129.55 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
55. Y79H2A.1 brp-1 78.90 2129.55 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
56. F54C1.7 pat-10 77.50 2091.76 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
57. F56H11.4 elo-1 77.50 2091.76 Elongation of very long chain fatty acids protein [Source:RefSeq peptide;Acc:NP_001263767]
58. RIT1P.688 77.50 2091.76
59. Y41C4A.13 sup-1 77.50 2091.76
60. F15A2.1 col-184 74.80 2018.89 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
61. T13F3.6 T13F3.6 74.80 2018.89
62. F01D4.4 egl-21 72.20 1948.71
63. ZK1193.1 col-19 72.20 1948.71 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
64. F11H8.3 col-8 70.80 1910.93 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
65. Y105E8B.1 lev-11 70.80 1910.93 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
66. C37C3.6 mig-6 69.50 1875.84 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
67. C49H3.11 rps-2 68.20 1840.75 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
68. F01G4.6 F01G4.6 68.20 1840.75 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
69. F41E6.2 grd-5 68.20 1840.75 GRounDhog (hedgehog-like family) [Source:RefSeq peptide;Acc:NP_505223]
70. F46F11.5 vha-10 68.20 1840.75 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
71. B0041.4 rpl-4 66.90 1805.66 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
72. F20A1.1 F20A1.1 66.90 1805.66
73. F54C9.1 iff-2 66.90 1805.66 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
74. E03D2.1 nlp-13 65.60 1770.58 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504170]
75. F15D4.8 flp-16 65.60 1770.58 FMRFamide-like neuropeptides 16 AQTFVRF-amide 1 AQTFVRF-amide 2 GQTFVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q7YX32]
76. F53F4.13 F53F4.13 65.60 1770.58
77. F57H12.7 mec-17 65.60 1770.58 Alpha-tubulin N-acetyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O45100]
78. K02E11.7 K02E11.7 65.60 1770.58
79. ZK1127.10 cth-2 65.60 1770.58 Putative cystathionine gamma-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P55216]
80. RIT6P.22 63.10 1703.10
81. Y105E8A.16 rps-20 63.10 1703.10 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
82. Y67H2A.5 Y67H2A.5 63.10 1703.10
83. F14F7.1 col-98 61.80 1668.01 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
84. F33A8.3 cey-1 61.80 1668.01 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
85. F46H5.3 F46H5.3 61.80 1668.01 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
86. F55H12.4 F55H12.4 61.80 1668.01
87. RIT6P.424 61.80 1668.01
88. W05E7.1 grd-3 61.80 1668.01 GRounDhog (hedgehog-like family) [Source:RefSeq peptide;Acc:NP_500346]
89. F13B10.2 rpl-3 60.50 1632.93 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
90. F49E2.5 F49E2.5 60.50 1632.93
91. K11H12.7 K11H12.7 60.50 1632.93
92. T05G5.6 ech-6 60.50 1632.93 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
93. T06C10.4 flp-10 60.50 1632.93 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_501306]
94. C18A11.7 dim-1 59.30 1600.54 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
95. C44B11.3 mec-12 59.30 1600.54 Tubulin alpha-3 chain [Source:UniProtKB/Swiss-Prot;Acc:P91910]
96. F49C12.13 vha-17 59.30 1600.54 V-type proton ATPase subunit e [Source:UniProtKB/Swiss-Prot;Acc:Q20591]
97. F56E10.4 rps-27 59.30 1600.54 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
98. R07H5.8 R07H5.8 59.30 1600.54
99. T25G12.3 T25G12.3 58.00 1565.45
100. F25H2.5 ndk-1 56.80 1533.06 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA