C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54C9.1

Gene ID Gene Name Reads Transcripts Annotation
F54C9.1 iff-2 63995 F54C9.1.1, F54C9.1.2 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]

Genes with expression patterns similar to F54C9.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54C9.1 iff-2 63995 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
2. F55D10.2 rpl-25.1 95984 7.825 0.973 0.981 0.948 0.981 0.979 0.997 0.976 0.990 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
3. F07D10.1 rpl-11.2 64869 7.725 0.967 0.964 0.955 0.964 0.962 0.981 0.938 0.994 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
4. C07A12.4 pdi-2 48612 7.553 0.970 0.913 0.974 0.913 0.918 0.967 0.908 0.990 Protein disulfide-isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17770]
5. C15H9.6 hsp-3 62738 7.549 0.925 0.928 0.958 0.928 0.942 0.930 0.945 0.993 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
6. R03G5.1 eef-1A.2 15061 7.535 0.935 0.963 0.968 0.963 0.886 0.970 0.868 0.982 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
7. K04D7.3 gta-1 20812 7.413 0.936 0.940 0.929 0.940 0.920 0.964 0.865 0.919 Probable 4-aminobutyrate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q21217]
8. T04C10.4 atf-5 12715 7.322 0.831 0.908 0.891 0.908 0.941 0.960 0.941 0.942 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_510456]
9. T14F9.1 vha-15 32310 7.302 0.920 0.923 0.930 0.923 0.932 0.963 0.878 0.833 Probable V-type proton ATPase subunit H 2 [Source:UniProtKB/Swiss-Prot;Acc:Q22494]
10. R03E1.2 vha-20 25289 7.296 0.934 0.917 0.901 0.917 0.931 0.970 0.879 0.847 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_510360]
11. ZK1321.3 aqp-10 3813 7.29 0.953 0.902 0.865 0.902 0.822 0.965 0.900 0.981 Putative aquaporin-10 [Source:UniProtKB/Swiss-Prot;Acc:Q09369]
12. T04G9.5 trap-2 25251 7.274 0.920 0.805 0.951 0.805 0.902 0.953 0.951 0.987 Translocon-associated protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q22169]
13. B0403.4 pdi-6 11622 7.266 0.922 0.861 0.952 0.861 0.890 0.935 0.872 0.973 Probable protein disulfide-isomerase A6 [Source:UniProtKB/Swiss-Prot;Acc:Q11067]
14. C54H2.5 sft-4 19036 7.261 0.875 0.847 0.901 0.847 0.945 0.977 0.885 0.984 Surfeit locus protein 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18864]
15. W05B2.6 col-92 29501 7.241 0.949 0.871 0.866 0.871 0.933 0.969 0.834 0.948 COLlagen [Source:RefSeq peptide;Acc:NP_499408]
16. F20B6.2 vha-12 60816 7.229 0.919 0.922 0.942 0.922 0.950 0.960 0.860 0.754 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
17. F13D12.4 alh-8 106503 7.225 0.918 0.931 0.951 0.931 0.892 0.926 0.864 0.812 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
18. F09E10.3 dhs-25 9055 7.21 0.955 0.884 0.944 0.884 0.853 0.978 0.834 0.878 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_508282]
19. T15B7.3 col-143 71255 7.208 0.915 0.854 0.860 0.854 0.958 0.966 0.863 0.938 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
20. K10B3.9 mai-1 161647 7.184 0.959 0.913 0.849 0.913 0.937 0.901 0.783 0.929 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
21. B0563.4 tmbi-4 7067 7.175 0.892 0.835 0.928 0.835 0.918 0.980 0.845 0.942 Transmembrane BAX inhibitor motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q11080]
22. F02E8.1 asb-2 46847 7.167 0.942 0.969 0.921 0.969 0.862 0.838 0.726 0.940 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_508770]
23. T25F10.6 clik-1 175948 7.164 0.942 0.835 0.877 0.835 0.903 0.975 0.895 0.902 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
24. W05B2.5 col-93 64768 7.155 0.930 0.849 0.826 0.849 0.950 0.958 0.856 0.937 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
25. T22E5.5 mup-2 65873 7.154 0.918 0.859 0.786 0.859 0.941 0.958 0.904 0.929 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
26. C01F6.6 nrfl-1 15103 7.133 0.900 0.884 0.932 0.884 0.912 0.969 0.889 0.763 NHERF (mammalian Na/H Exchange Regulatory Factor) Like [Source:RefSeq peptide;Acc:NP_741478]
27. T05G5.6 ech-6 70806 7.124 0.929 0.960 0.875 0.960 0.875 0.901 0.780 0.844 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
28. K09A9.5 gas-1 21971 7.107 0.967 0.926 0.880 0.926 0.875 0.886 0.783 0.864 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873]
29. F18H3.3 pab-2 34007 7.097 0.853 0.897 0.852 0.897 0.866 0.970 0.824 0.938 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_510259]
30. F57B1.3 col-159 28012 7.096 0.946 0.836 0.805 0.836 0.945 0.952 0.855 0.921 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
31. F09B9.3 erd-2 7180 7.093 0.882 0.841 0.902 0.841 0.875 0.945 0.832 0.975 ER lumen protein-retaining receptor [Source:UniProtKB/Swiss-Prot;Acc:P48583]
32. M03F4.7 calu-1 11150 7.089 0.954 0.895 0.852 0.895 0.915 0.942 0.799 0.837 CALUmenin (calcium-binding protein) homolog [Source:RefSeq peptide;Acc:NP_001024806]
33. VW06B3R.1 ucr-2.1 23178 7.075 0.959 0.927 0.922 0.927 0.857 0.878 0.758 0.847 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_510012]
34. C55B6.2 dnj-7 6738 7.069 0.830 0.883 0.848 0.883 0.855 0.944 0.869 0.957 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_509209]
35. W02D3.5 lbp-6 40185 7.065 0.977 0.961 0.945 0.961 0.919 0.823 0.841 0.638 Fatty acid-binding protein homolog 6 [Source:UniProtKB/Swiss-Prot;Acc:O01812]
36. F26F12.1 col-140 160999 7.061 0.937 0.885 0.826 0.885 0.927 0.978 0.770 0.853 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
37. C15H9.7 flu-2 6738 7.048 0.959 0.844 0.780 0.844 0.911 0.947 0.890 0.873 Kynureninase [Source:UniProtKB/Swiss-Prot;Acc:Q18026]
38. Y38A10A.5 crt-1 97519 7.038 0.860 0.898 0.811 0.898 0.844 0.932 0.824 0.971 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
39. F11G11.11 col-20 174687 7.035 0.956 0.882 0.876 0.882 0.921 0.845 0.738 0.935 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
40. T14G12.3 tag-18 22633 7.031 0.912 0.868 0.820 0.868 0.865 0.957 0.844 0.897
41. ZK1193.1 col-19 102505 7.029 0.939 0.877 0.903 0.877 0.869 0.961 0.739 0.864 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
42. R10E11.8 vha-1 138697 7.007 0.911 0.870 0.910 0.870 0.922 0.960 0.800 0.764 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
43. R11A5.4 pck-2 55256 7.006 0.924 0.854 0.760 0.854 0.947 0.967 0.845 0.855 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
44. Y105C5B.28 gln-3 27333 6.974 0.937 0.856 0.822 0.856 0.916 0.968 0.802 0.817 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
45. F28A10.6 acdh-9 5255 6.963 0.876 0.850 0.817 0.850 0.872 0.980 0.763 0.955 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_493832]
46. C53B7.4 asg-2 33363 6.95 0.968 0.895 0.926 0.895 0.903 0.879 0.644 0.840 Probable ATP synthase subunit g 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q18803]
47. C28C12.7 spp-10 17439 6.941 0.852 0.865 0.777 0.865 0.916 0.953 0.848 0.865 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_741466]
48. C18B2.5 C18B2.5 5374 6.941 0.754 0.874 0.811 0.874 0.866 0.955 0.883 0.924
49. H27C11.1 nhr-97 12476 6.933 0.843 0.854 0.842 0.854 0.922 0.951 0.829 0.838 Nuclear hormone receptor family member nhr-97 [Source:UniProtKB/Swiss-Prot;Acc:Q9BJK5]
50. F52D10.3 ftt-2 101404 6.931 0.818 0.838 0.809 0.838 0.914 0.967 0.850 0.897 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
51. C18A11.7 dim-1 110263 6.914 0.926 0.805 0.709 0.805 0.917 0.963 0.866 0.923 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
52. F59F4.3 F59F4.3 1576 6.911 0.945 0.608 0.935 0.608 0.899 0.975 0.955 0.986
53. F48E3.3 uggt-1 6543 6.902 0.861 0.799 0.915 0.799 0.784 0.942 0.841 0.961 UDP-Glucose Glycoprotein glucosylTransferase [Source:RefSeq peptide;Acc:NP_509268]
54. C50F4.5 his-41 14268 6.878 0.789 0.791 0.780 0.791 0.931 0.964 0.893 0.939 Probable histone H2B 3 [Source:UniProtKB/Swiss-Prot;Acc:Q27484]
55. C34F6.2 col-178 152954 6.872 0.931 0.882 0.810 0.882 0.807 0.984 0.740 0.836 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
56. F58A4.7 hlh-11 15514 6.868 0.821 0.831 0.867 0.831 0.906 0.953 0.786 0.873 Helix-loop-helix protein 11 [Source:UniProtKB/Swiss-Prot;Acc:P34474]
57. F44A6.1 nucb-1 9013 6.864 0.855 0.754 0.873 0.754 0.860 0.948 0.854 0.966 NUCleoBindin homolog [Source:RefSeq peptide;Acc:NP_741885]
58. F15B10.1 nstp-2 23346 6.855 0.868 0.834 0.792 0.834 0.945 0.954 0.751 0.877 Nucleotide Sugar TransPorter family [Source:RefSeq peptide;Acc:NP_001040936]
59. C34F6.3 col-179 100364 6.835 0.928 0.875 0.820 0.875 0.925 0.971 0.692 0.749 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
60. H06O01.1 pdi-3 56179 6.827 0.866 0.806 0.738 0.806 0.851 0.957 0.821 0.982
61. F14F7.1 col-98 72968 6.826 0.893 0.802 0.836 0.802 0.941 0.958 0.769 0.825 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
62. F42G4.3 zyx-1 50908 6.818 0.817 0.765 0.908 0.765 0.915 0.964 0.775 0.909 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
63. F56B3.1 col-103 45613 6.814 0.906 0.763 0.839 0.763 0.920 0.967 0.802 0.854 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
64. F07A5.7 unc-15 276610 6.813 0.859 0.829 0.696 0.829 0.898 0.978 0.856 0.868 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
65. C53B4.5 col-119 131020 6.812 0.937 0.873 0.866 0.873 0.761 0.967 0.755 0.780 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
66. K01A2.8 mps-2 10994 6.807 0.825 0.811 0.886 0.811 0.886 0.970 0.695 0.923 MiRP K channel accessory Subunit [Source:RefSeq peptide;Acc:NP_493704]
67. R01E6.3 cah-4 42749 6.806 0.883 0.799 0.645 0.799 0.954 0.972 0.878 0.876 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
68. T27D12.2 clh-1 6001 6.806 0.889 0.809 0.821 0.809 0.908 0.974 0.759 0.837 Chloride channel protein [Source:RefSeq peptide;Acc:NP_001022373]
69. T21C12.2 hpd-1 22564 6.792 0.902 0.869 0.668 0.869 0.912 0.954 0.888 0.730 4-hydroxyphenylpyruvate dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q22633]
70. F41E7.5 fipr-21 37102 6.748 0.888 0.783 0.814 0.783 0.917 0.955 0.743 0.865 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_509727]
71. K02A4.1 bcat-1 43705 6.746 0.813 0.825 0.860 0.825 0.782 0.967 0.750 0.924 Branched-chain-amino-acid aminotransferase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P54688]
72. R148.6 heh-1 40904 6.741 0.934 0.721 0.691 0.721 0.891 0.973 0.857 0.953 Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
73. R12H7.2 asp-4 12077 6.734 0.897 0.840 0.963 0.840 0.799 0.919 0.681 0.795 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_510191]
74. F29B9.11 F29B9.11 85694 6.719 0.867 0.815 0.755 0.815 0.908 0.959 0.693 0.907
75. C34E11.1 rsd-3 5846 6.71 0.685 0.787 0.826 0.787 0.868 0.958 0.849 0.950
76. F29G6.3 hpo-34 19933 6.688 0.923 0.925 0.954 0.925 0.886 0.763 0.771 0.541
77. Y77E11A.15 col-106 105434 6.684 0.896 0.817 0.612 0.817 0.933 0.952 0.774 0.883 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
78. C50F4.7 his-37 6537 6.673 0.875 0.702 0.794 0.702 0.907 0.950 0.831 0.912 Histone H4 [Source:UniProtKB/Swiss-Prot;Acc:P62784]
79. R04A9.4 ife-2 3282 6.671 0.825 0.759 0.803 0.759 0.884 0.966 0.749 0.926 Eukaryotic translation initiation factor 4E-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21693]
80. W03G11.1 col-181 100180 6.663 0.886 0.821 0.648 0.821 0.950 0.943 0.692 0.902 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
81. C34F6.8 idh-2 2221 6.634 0.776 0.792 0.735 0.792 0.885 0.950 0.810 0.894 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_509875]
82. C14H10.2 C14H10.2 983 6.63 0.908 0.721 0.715 0.721 0.916 0.953 0.784 0.912
83. K12B6.1 sago-1 4325 6.623 0.720 0.735 0.898 0.735 0.885 0.952 0.875 0.823 Piwi-like protein [Source:RefSeq peptide;Acc:NP_504610]
84. F02A9.2 far-1 119216 6.616 0.821 0.785 0.635 0.785 0.907 0.973 0.814 0.896 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
85. F35C8.6 pfn-2 4559 6.613 0.878 0.607 0.867 0.607 0.954 0.959 0.853 0.888 Profilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20025]
86. M05B5.2 let-522 3329 6.612 0.811 0.677 0.814 0.677 0.870 0.969 0.862 0.932
87. Y71G12B.11 tln-1 7529 6.611 0.818 0.792 0.682 0.792 0.876 0.951 0.795 0.905 TaLiN [Source:RefSeq peptide;Acc:NP_001293439]
88. C43G2.2 bicd-1 6426 6.61 0.805 0.782 0.802 0.782 0.791 0.971 0.848 0.829 BICaudal D (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_001293734]
89. K02D7.3 col-101 41809 6.594 0.829 0.607 0.869 0.607 0.948 0.959 0.858 0.917 COLlagen [Source:RefSeq peptide;Acc:NP_499905]
90. R03E9.1 mdl-1 15351 6.591 0.873 0.804 0.838 0.804 0.912 0.960 0.677 0.723 MAD-Like [Source:RefSeq peptide;Acc:NP_509136]
91. H13N06.5 hke-4.2 2888 6.589 0.794 0.689 0.893 0.689 0.802 0.956 0.799 0.967 Histidine-rich membrane protein KE4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTQ7]
92. T21D12.4 pat-6 5640 6.549 0.810 0.726 0.850 0.726 0.811 0.958 0.799 0.869 Paralyzed arrest at two-fold protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O16785]
93. B0213.3 nlp-28 12751 6.536 0.902 0.685 0.689 0.685 0.931 0.954 0.833 0.857 Neuropeptide-like protein 28 QWGYGGY-amide GYGGYGGY-amide GMYGGY-amide GMYGGW-amide [Source:UniProtKB/Swiss-Prot;Acc:O44665]
94. F01F1.12 aldo-2 42507 6.532 0.764 0.726 0.740 0.726 0.966 0.960 0.821 0.829 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
95. W06A7.3 ret-1 58319 6.524 0.793 0.659 0.824 0.659 0.847 0.980 0.807 0.955 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
96. F18E3.13 F18E3.13 8001 6.523 0.780 0.754 0.648 0.754 0.871 0.969 0.831 0.916
97. F08F1.7 tag-123 4901 6.471 0.806 0.772 0.859 0.772 0.721 0.855 0.714 0.972
98. R09F10.4 inx-5 7528 6.469 0.863 0.748 0.618 0.748 0.782 0.967 0.790 0.953 Innexin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q23027]
99. F46G10.3 sir-2.3 2416 6.45 0.770 0.779 0.869 0.779 0.761 0.982 0.752 0.758 NAD-dependent protein deacylase sir-2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q20481]
100. W01A11.3 unc-83 5196 6.444 0.778 0.862 0.805 0.862 0.860 0.955 0.647 0.675 Nuclear migration protein unc-83 [Source:UniProtKB/Swiss-Prot;Acc:Q23064]

There are 224 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA