C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm2, section s14.

Sample reads: 25,089. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F02A9.3 far-2 267.00 10642.05 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
2. F11C3.3 unc-54 223.00 8888.30 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
3. F59D8.2 vit-4 196.00 7812.14 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
4. T04C12.6 act-1 191.00 7612.85 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
5. W06H8.8 ttn-1 145.00 5779.39 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
6. R05G6.7 vdac-1 140.00 5580.10 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
7. RIT1P.688 135.00 5380.81
8. ZK721.2 unc-27 128.00 5101.81 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
9. F07A5.7 unc-15 122.00 4862.66 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. F28H1.2 cpn-3 120.00 4782.94 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
11. F01G12.5 let-2 118.00 4703.23 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
12. C42D8.2 vit-2 115.00 4583.65 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
13. T27E9.1 ant-1.1 114.00 4543.80 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
14. Y18D10A.17 car-1 112.00 4464.08 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
15. E04A4.7 cyc-2.1 109.00 4344.51 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
16. F54E7.2 rps-12 103.00 4105.36 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
17. K02F2.2 ahcy-1 102.00 4065.50 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
18. F37C12.4 rpl-36 100.00 3985.79 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
19. F59D8.1 vit-3 98.60 3929.99 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
20. Y69A2AR.18 Y69A2AR.18 95.70 3814.40
21. Y57G11C.15 sec-61 92.80 3698.81 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
22. C34E10.6 atp-2 91.40 3643.01 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
23. F39B2.6 rps-26 90.00 3587.21 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
24. F36A2.6 rps-15 88.60 3531.41 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
25. M03F4.2 act-4 87.20 3475.61 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
26. T04C12.4 act-3 85.80 3419.80 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
27. T25F10.6 clik-1 83.00 3308.20 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
28. Y82E9BR.3 Y82E9BR.3 83.00 3308.20 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
29. F31E3.5 eef-1A.1 81.60 3252.40 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
30. F56E10.4 rps-27 78.90 3144.79 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
31. K07H8.6 vit-6 77.50 3088.98 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
32. Y75B12B.2 cyn-7 76.20 3037.17 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
33. Y106G6H.2 pab-1 74.80 2981.37 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
34. Y105E8B.1 lev-11 73.50 2929.55 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
35. C08H9.2 vgln-1 69.50 2770.12 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
36. Y24D9A.4 rpl-7A 69.50 2770.12 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
37. F52H3.7 lec-2 68.20 2718.31 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
38. K08D12.6 K08D12.6 68.20 2718.31
39. W09C5.6 rpl-31 66.90 2666.49 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
40. Y105E8A.16 rps-20 66.90 2666.49 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
41. M18.1 col-129 65.60 2614.68 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
42. F08B6.4 unc-87 63.10 2515.03 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
43. B0041.4 rpl-4 61.80 2463.22 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
44. F13B10.2 rpl-3 61.80 2463.22 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
45. Y56A3A.21 trap-4 60.50 2411.40 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
46. Y71A12B.1 rps-6 60.50 2411.40 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
47. F26D10.3 hsp-1 59.30 2363.57 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
48. R10E11.8 vha-1 59.30 2363.57 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
49. T04C12.5 act-2 59.30 2363.57 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
50. K10B3.9 mai-1 58.00 2311.76 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
51. C04F12.4 rpl-14 56.80 2263.93 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
52. C06B8.8 rpl-38 56.80 2263.93 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
53. F42C5.8 rps-8 56.80 2263.93 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
54. F55D10.2 rpl-25.1 56.80 2263.93 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
55. F20H11.3 mdh-2 55.50 2212.11 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
56. F40F11.1 rps-11 55.50 2212.11 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
57. F57B1.4 col-160 55.50 2212.11 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
58. H28O16.1 H28O16.1 55.50 2212.11 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
59. K02B2.5 rps-25 54.30 2164.28 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
60. B0393.1 rps-0 53.00 2112.47 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
61. C14B9.7 rpl-21 53.00 2112.47 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
62. C18A11.7 dim-1 53.00 2112.47 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
63. T25C8.2 act-5 53.00 2112.47 ACTin [Source:RefSeq peptide;Acc:NP_499809]
64. C36E6.3 mlc-1 51.80 2064.64 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
65. Y66H1B.3 51.80 2064.64
66. Y67H2A.5 Y67H2A.5 51.80 2064.64
67. B0513.3 rpl-29 50.60 2016.81 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
68. Y48B6A.14 hmg-1.1 50.60 2016.81 HMG [Source:RefSeq peptide;Acc:NP_496970]
69. D1007.6 rps-10 49.40 1968.98 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
70. F13D12.4 alh-8 49.40 1968.98 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
71. F37C12.9 rps-14 49.40 1968.98 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
72. C09H10.2 rpl-41 48.20 1921.15 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
73. F09F7.2 mlc-3 48.20 1921.15 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
74. F53A9.10 tnt-2 48.20 1921.15 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
75. R13A5.8 rpl-9 48.20 1921.15 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
76. W07G4.4 lap-2 47.00 1873.32 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
77. Y49A3A.3 Y49A3A.3 47.00 1873.32
78. C42C1.14 rpl-34 45.80 1825.49 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
79. C49F5.1 sams-1 45.80 1825.49 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
80. RIT6P.22 45.80 1825.49
81. Y38F2AL.3 vha-11 45.80 1825.49 V-type proton ATPase subunit C [Source:UniProtKB/Swiss-Prot;Acc:Q9XXU9]
82. F01G4.6 F01G4.6 44.60 1777.66 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
83. F52D10.3 ftt-2 44.60 1777.66 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
84. T21H3.3 cmd-1 44.60 1777.66 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
85. F11H8.3 col-8 43.40 1729.83 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
86. F49E2.5 F49E2.5 43.40 1729.83
87. F25H2.5 ndk-1 42.20 1682.00 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
88. K11H12.2 rpl-15 42.20 1682.00 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
89. T20G5.2 cts-1 42.20 1682.00 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
90. Y71F9AM.6 trap-1 42.20 1682.00 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_491076]
91. C23G10.3 rps-3 41.00 1634.17 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
92. C34F6.2 col-178 41.00 1634.17 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
93. F33A8.3 cey-1 41.00 1634.17 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
94. T06E6.2 cyb-3 41.00 1634.17 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
95. W06A7.3 ret-1 41.00 1634.17 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
96. ZC434.2 rps-7 41.00 1634.17 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
97. C07H6.5 cgh-1 39.90 1590.33 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
98. F07D10.1 rpl-11.2 39.90 1590.33 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
99. F28D1.7 rps-23 39.90 1590.33 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
100. K08D12.3 K08D12.3 39.90 1590.33
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA