C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T22A3.3

Gene ID Gene Name Reads Transcripts Annotation
T22A3.3 lst-1 10728 T22A3.3a, T22A3.3b.1, T22A3.3b.2, T22A3.3b.3, T22A3.3b.4, T22A3.3b.5 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001021628]

Genes with expression patterns similar to T22A3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T22A3.3 lst-1 10728 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001021628]
2. T09F3.3 gpd-1 7182 7.758 0.941 0.972 0.971 0.972 0.966 0.987 0.972 0.977 Glyceraldehyde-3-phosphate dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:P04970]
3. F33H1.2 gpd-4 5618 7.709 0.950 0.978 0.970 0.978 0.958 0.972 0.930 0.973 Glyceraldehyde-3-phosphate dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P17331]
4. C09G9.6 oma-1 18743 7.633 0.948 0.965 0.967 0.965 0.946 0.974 0.922 0.946
5. K10B2.5 ani-2 11397 7.624 0.893 0.958 0.933 0.958 0.984 0.975 0.969 0.954 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
6. F55C5.4 capg-2 2600 7.614 0.946 0.968 0.941 0.968 0.948 0.964 0.931 0.948 CAP-G condensin subunit [Source:RefSeq peptide;Acc:NP_506080]
7. Y50E8A.4 unc-61 8599 7.611 0.927 0.966 0.967 0.966 0.940 0.965 0.921 0.959
8. T07A9.6 daf-18 15998 7.555 0.964 0.972 0.981 0.972 0.931 0.968 0.880 0.887 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
9. F44F4.2 egg-3 5572 7.541 0.954 0.974 0.965 0.974 0.936 0.909 0.885 0.944 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_496341]
10. H31G24.4 cyb-2.2 14285 7.539 0.969 0.956 0.977 0.956 0.940 0.953 0.926 0.862 CYclin B [Source:RefSeq peptide;Acc:NP_491297]
11. F35B12.5 sas-5 4606 7.533 0.920 0.939 0.956 0.939 0.970 0.968 0.896 0.945 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
12. F23B2.6 aly-2 7301 7.533 0.946 0.978 0.941 0.978 0.938 0.959 0.859 0.934 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
13. Y63D3A.4 tdpt-1 2906 7.526 0.920 0.957 0.951 0.957 0.926 0.968 0.896 0.951 5'-tyrosyl-DNA phosphodiesterase [Source:UniProtKB/Swiss-Prot;Acc:Q9XWG3]
14. F12F6.5 srgp-1 9048 7.524 0.915 0.939 0.945 0.939 0.966 0.970 0.910 0.940 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
15. F25H2.8 ubc-25 12368 7.517 0.933 0.965 0.944 0.965 0.981 0.934 0.916 0.879 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
16. F11A10.1 lex-1 13720 7.512 0.903 0.939 0.936 0.939 0.955 0.951 0.945 0.944 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
17. C05C10.6 ufd-3 6304 7.512 0.875 0.955 0.950 0.955 0.959 0.957 0.936 0.925 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
18. W09C5.2 unc-59 5784 7.509 0.952 0.952 0.948 0.952 0.960 0.955 0.926 0.864
19. VW02B12L.3 ebp-2 12251 7.507 0.901 0.949 0.962 0.949 0.924 0.934 0.935 0.953 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_496438]
20. T09B4.1 pigv-1 13282 7.507 0.972 0.973 0.979 0.973 0.915 0.926 0.852 0.917 GPI mannosyltransferase pigv-1 [Source:UniProtKB/Swiss-Prot;Acc:O02164]
21. C17D12.1 dhhc-7 6002 7.499 0.915 0.956 0.905 0.956 0.973 0.930 0.916 0.948 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
22. C14B9.4 plk-1 18785 7.493 0.845 0.950 0.942 0.950 0.974 0.952 0.937 0.943 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
23. C12D8.10 akt-1 12100 7.492 0.864 0.939 0.947 0.939 0.953 0.949 0.966 0.935 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
24. F49E11.1 mbk-2 30367 7.489 0.971 0.980 0.974 0.980 0.940 0.933 0.842 0.869 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
25. C34G6.5 cdc-7 2956 7.481 0.909 0.922 0.939 0.922 0.942 0.984 0.898 0.965 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491705]
26. F26H11.1 kbp-3 4177 7.48 0.832 0.955 0.920 0.955 0.985 0.959 0.932 0.942 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
27. Y39H10A.7 chk-1 3350 7.479 0.921 0.957 0.956 0.957 0.946 0.920 0.870 0.952 Serine/threonine-protein kinase chk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Z3]
28. C25A1.5 C25A1.5 9135 7.477 0.869 0.965 0.906 0.965 0.962 0.966 0.885 0.959
29. Y11D7A.12 flh-1 4612 7.471 0.939 0.964 0.960 0.964 0.937 0.948 0.860 0.899 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
30. Y49E10.19 ani-1 12757 7.465 0.811 0.942 0.904 0.942 0.956 0.978 0.954 0.978 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
31. C13B4.2 usp-14 9000 7.456 0.851 0.949 0.951 0.949 0.933 0.965 0.898 0.960 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
32. F16D3.2 rsd-6 8211 7.454 0.895 0.948 0.905 0.948 0.944 0.972 0.912 0.930
33. C29E4.2 kle-2 5527 7.451 0.831 0.944 0.920 0.944 0.949 0.965 0.957 0.941 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
34. T12A2.8 gen-1 10490 7.451 0.923 0.962 0.950 0.962 0.976 0.911 0.919 0.848 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
35. F23C8.4 ubxn-1 25368 7.448 0.863 0.970 0.967 0.970 0.927 0.916 0.902 0.933 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
36. C02F4.1 ced-5 9096 7.44 0.857 0.945 0.954 0.945 0.967 0.947 0.944 0.881 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
37. C03E10.4 gly-20 10739 7.436 0.891 0.971 0.936 0.971 0.932 0.926 0.920 0.889 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
38. R01H2.6 ubc-18 13394 7.431 0.809 0.960 0.933 0.960 0.957 0.958 0.898 0.956 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
39. F49D11.9 tag-296 7973 7.43 0.867 0.968 0.919 0.968 0.950 0.918 0.923 0.917
40. F28F8.6 atx-3 1976 7.421 0.932 0.942 0.923 0.942 0.920 0.924 0.955 0.883 Ataxin-3 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17850]
41. D1022.7 aka-1 10681 7.419 0.887 0.939 0.929 0.939 0.965 0.974 0.904 0.882 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
42. Y43F4B.6 klp-19 13220 7.418 0.917 0.929 0.943 0.929 0.940 0.901 0.950 0.909 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
43. Y87G2A.7 nyn-2 1880 7.409 0.943 0.955 0.960 0.955 0.936 0.946 0.875 0.839 NYN domain ribonuclease homolog [Source:RefSeq peptide;Acc:NP_493379]
44. F10G7.4 scc-1 2767 7.407 0.836 0.916 0.944 0.916 0.927 0.975 0.933 0.960 Sister chromatid cohesion protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19325]
45. K10H10.1 vnut-1 4618 7.407 0.859 0.923 0.946 0.923 0.925 0.950 0.951 0.930 Vesicular NUcleotide Transporte [Source:RefSeq peptide;Acc:NP_497007]
46. B0334.5 B0334.5 4713 7.406 0.892 0.932 0.945 0.932 0.956 0.966 0.880 0.903
47. M03D4.1 zen-4 8185 7.402 0.881 0.955 0.959 0.955 0.946 0.919 0.870 0.917 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
48. Y43C5A.6 rad-51 5327 7.402 0.839 0.915 0.933 0.915 0.935 0.962 0.925 0.978 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
49. T28D6.9 pen-2 2311 7.401 0.898 0.941 0.940 0.941 0.951 0.949 0.832 0.949 Gamma-secretase subunit pen-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U357]
50. F52E1.10 vha-18 3090 7.4 0.770 0.916 0.922 0.916 0.974 0.980 0.956 0.966 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
51. F12F6.3 rib-1 10524 7.399 0.901 0.942 0.933 0.942 0.962 0.950 0.866 0.903 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
52. T05C12.6 mig-5 5242 7.396 0.925 0.942 0.972 0.942 0.924 0.954 0.842 0.895 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
53. ZK1128.5 ham-3 2917 7.394 0.897 0.942 0.945 0.942 0.942 0.981 0.836 0.909
54. T28F3.1 nra-1 7034 7.391 0.853 0.925 0.896 0.925 0.974 0.969 0.945 0.904 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
55. F32B6.8 tbc-3 9252 7.382 0.862 0.939 0.932 0.939 0.974 0.920 0.962 0.854 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
56. ZK287.5 rbx-1 13546 7.381 0.847 0.943 0.938 0.943 0.946 0.953 0.863 0.948 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
57. Y53C12A.4 mop-25.2 7481 7.378 0.853 0.934 0.918 0.934 0.951 0.965 0.901 0.922 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
58. Y49E10.3 pph-4.2 8662 7.378 0.900 0.961 0.923 0.961 0.961 0.928 0.835 0.909 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
59. K10B2.1 lin-23 15896 7.378 0.907 0.929 0.941 0.929 0.942 0.950 0.922 0.858 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
60. R06C7.1 wago-1 4303 7.372 0.927 0.940 0.911 0.940 0.950 0.947 0.851 0.906 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
61. ZC404.3 spe-39 7397 7.366 0.887 0.940 0.955 0.940 0.931 0.889 0.878 0.946 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
62. ZC410.3 mans-4 2496 7.36 0.763 0.896 0.931 0.896 0.974 0.978 0.946 0.976 alpha-1,2-Mannosidase [Source:RefSeq peptide;Acc:NP_001255362]
63. F20D12.4 czw-1 2729 7.357 0.892 0.940 0.942 0.940 0.953 0.972 0.883 0.835 Caenorhabditis Zeste White 10 (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_501327]
64. K08E3.6 cyk-4 8158 7.356 0.873 0.954 0.875 0.954 0.955 0.918 0.932 0.895 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
65. AH6.5 mex-6 19351 7.356 0.975 0.976 0.975 0.976 0.870 0.962 0.763 0.859 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
66. C28D4.3 gln-6 16748 7.356 0.959 0.958 0.954 0.958 0.965 0.883 0.859 0.820 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_501733]
67. ZC404.9 gck-2 8382 7.355 0.801 0.927 0.886 0.927 0.953 0.974 0.937 0.950 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
68. F26E4.11 hrdl-1 14721 7.352 0.942 0.968 0.946 0.968 0.912 0.912 0.870 0.834 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
69. C27A12.7 C27A12.7 1922 7.351 0.920 0.943 0.953 0.943 0.958 0.957 0.870 0.807
70. C50B6.2 nasp-2 9744 7.351 0.957 0.960 0.970 0.960 0.948 0.890 0.797 0.869 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_506298]
71. Y55D9A.1 efa-6 10012 7.349 0.905 0.924 0.907 0.924 0.949 0.955 0.897 0.888 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
72. D2030.2 D2030.2 6741 7.348 0.864 0.913 0.912 0.913 0.956 0.945 0.943 0.902
73. F55G1.4 rod-1 1885 7.348 0.876 0.929 0.924 0.929 0.953 0.933 0.916 0.888 ROD (Drosophila RoughDeal) homolog [Source:RefSeq peptide;Acc:NP_501200]
74. F57C2.6 spat-1 5615 7.347 0.945 0.968 0.971 0.968 0.921 0.924 0.793 0.857 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
75. F18A1.5 rpa-1 3109 7.347 0.877 0.953 0.945 0.953 0.967 0.881 0.828 0.943 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
76. C25G4.5 dpy-26 1624 7.347 0.911 0.956 0.861 0.956 0.940 0.963 0.917 0.843 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_502378]
77. C09G4.3 cks-1 17852 7.346 0.878 0.970 0.947 0.970 0.905 0.936 0.795 0.945 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
78. ZK858.1 gld-4 14162 7.346 0.842 0.965 0.910 0.965 0.914 0.953 0.898 0.899 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
79. T27C10.3 mop-25.3 2127 7.345 0.880 0.952 0.895 0.952 0.955 0.930 0.873 0.908 MO25-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZM2]
80. ZK675.1 ptc-1 18468 7.345 0.954 0.979 0.965 0.979 0.937 0.879 0.833 0.819 Protein patched homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09614]
81. F37A4.8 isw-1 9337 7.343 0.838 0.935 0.892 0.935 0.960 0.967 0.914 0.902 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
82. C07A9.3 tlk-1 12572 7.341 0.933 0.960 0.940 0.960 0.962 0.939 0.841 0.806 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
83. T17E9.1 kin-18 8172 7.34 0.878 0.921 0.933 0.921 0.935 0.970 0.877 0.905 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
84. T06D10.2 chaf-1 8121 7.338 0.868 0.951 0.920 0.951 0.901 0.950 0.889 0.908 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
85. C47G2.5 saps-1 7555 7.337 0.874 0.949 0.951 0.949 0.947 0.941 0.852 0.874 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
86. ZK353.8 ubxn-4 6411 7.33 0.900 0.924 0.954 0.924 0.939 0.906 0.885 0.898 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
87. Y45F10D.9 sas-6 9563 7.33 0.880 0.963 0.959 0.963 0.910 0.919 0.826 0.910 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
88. D1007.7 nrd-1 6738 7.329 0.835 0.926 0.913 0.926 0.944 0.966 0.904 0.915 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
89. F52B5.5 cep-1 2194 7.329 0.861 0.931 0.902 0.931 0.942 0.981 0.832 0.949 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
90. ZC262.3 iglr-2 6268 7.325 0.835 0.945 0.897 0.945 0.945 0.956 0.896 0.906 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
91. Y17G7B.17 Y17G7B.17 11197 7.325 0.882 0.914 0.948 0.914 0.955 0.960 0.902 0.850
92. F56D1.4 clr-1 8615 7.324 0.957 0.966 0.952 0.966 0.920 0.941 0.822 0.800 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
93. F30A10.10 usp-48 11536 7.323 0.846 0.939 0.893 0.939 0.956 0.929 0.900 0.921 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
94. T21B10.5 set-17 5292 7.323 0.925 0.943 0.935 0.943 0.955 0.971 0.761 0.890 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
95. Y110A7A.10 aap-1 4134 7.322 0.902 0.956 0.961 0.956 0.917 0.967 0.783 0.880 phosphoinositide kinase AdAPter subunit [Source:RefSeq peptide;Acc:NP_491522]
96. T06D8.8 rpn-9 11282 7.321 0.858 0.945 0.934 0.945 0.957 0.936 0.832 0.914 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
97. C04A2.7 dnj-5 9618 7.319 0.933 0.955 0.962 0.955 0.895 0.932 0.866 0.821 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
98. T06D8.6 cchl-1 26292 7.318 0.807 0.945 0.867 0.945 0.950 0.952 0.908 0.944 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
99. F35G12.8 smc-4 6202 7.317 0.807 0.928 0.913 0.928 0.944 0.963 0.932 0.902 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
100. M01E5.5 top-1 25458 7.315 0.806 0.934 0.894 0.934 0.949 0.962 0.884 0.952 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]

There are 889 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA