C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T12F5.5

Gene ID Gene Name Reads Transcripts Annotation
T12F5.5 larp-5 16417 T12F5.5a, T12F5.5b LARP (RNA binding La related protein) homolog [Source:RefSeq peptide;Acc:NP_491209]

Genes with expression patterns similar to T12F5.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T12F5.5 larp-5 16417 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LARP (RNA binding La related protein) homolog [Source:RefSeq peptide;Acc:NP_491209]
2. T24C4.6 zer-1 16051 7.673 0.967 0.983 0.971 0.983 0.975 0.968 0.908 0.918 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
3. D1014.3 snap-1 16776 7.653 0.953 0.972 0.980 0.972 0.991 0.965 0.931 0.889 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
4. C07A9.3 tlk-1 12572 7.647 0.979 0.979 0.979 0.979 0.981 0.948 0.926 0.876 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
5. Y65B4BR.4 wwp-1 23206 7.634 0.921 0.964 0.965 0.964 0.986 0.980 0.923 0.931 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
6. K02B2.3 mcu-1 20448 7.616 0.942 0.972 0.962 0.972 0.956 0.966 0.913 0.933 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
7. T16H12.5 bath-43 10021 7.589 0.959 0.975 0.965 0.975 0.960 0.956 0.916 0.883 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
8. F37C12.7 acs-4 25192 7.58 0.924 0.955 0.954 0.955 0.982 0.965 0.915 0.930 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_498568]
9. D1022.7 aka-1 10681 7.564 0.970 0.962 0.986 0.962 0.989 0.919 0.888 0.888 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
10. F25D7.2 tag-353 21026 7.559 0.918 0.967 0.971 0.967 0.968 0.953 0.933 0.882
11. Y105E8A.9 apg-1 9675 7.551 0.924 0.962 0.943 0.962 0.963 0.978 0.901 0.918 AdaPtin, Gamma chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_740937]
12. B0286.4 ntl-2 14207 7.548 0.939 0.971 0.957 0.971 0.969 0.978 0.887 0.876 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
13. F32B6.8 tbc-3 9252 7.547 0.953 0.965 0.965 0.965 0.974 0.958 0.911 0.856 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
14. T12A2.8 gen-1 10490 7.543 0.967 0.983 0.972 0.983 0.964 0.941 0.904 0.829 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
15. D1037.4 rab-8 14097 7.534 0.926 0.972 0.978 0.972 0.967 0.973 0.922 0.824 RAB family [Source:RefSeq peptide;Acc:NP_491199]
16. T20G5.1 chc-1 32620 7.533 0.922 0.970 0.954 0.970 0.965 0.986 0.887 0.879 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
17. C46C2.1 wnk-1 15184 7.532 0.903 0.967 0.964 0.967 0.952 0.946 0.905 0.928 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
18. K10B2.1 lin-23 15896 7.532 0.970 0.944 0.975 0.944 0.979 0.960 0.918 0.842 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
19. F48E8.5 paa-1 39773 7.526 0.926 0.970 0.967 0.970 0.962 0.979 0.885 0.867 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
20. ZK688.8 gly-3 8885 7.522 0.914 0.972 0.927 0.972 0.982 0.896 0.921 0.938 Polypeptide N-acetylgalactosaminyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:P34678]
21. K10C8.3 istr-1 14718 7.52 0.926 0.979 0.972 0.979 0.970 0.984 0.899 0.811 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
22. F46F3.4 ape-1 8747 7.518 0.961 0.976 0.965 0.976 0.967 0.961 0.852 0.860 Apoptotic enhancer 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9XVN3]
23. F52B11.1 cfp-1 8570 7.507 0.899 0.961 0.957 0.961 0.964 0.953 0.883 0.929 CFP1 (CpG-binding protein, CXXC Finger Protein 1) homolog [Source:RefSeq peptide;Acc:NP_001023214]
24. F09G2.8 F09G2.8 2899 7.507 0.877 0.965 0.972 0.965 0.978 0.952 0.917 0.881 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
25. T05B11.3 clic-1 19766 7.507 0.955 0.960 0.983 0.960 0.963 0.911 0.858 0.917 Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
26. T03F1.8 guk-1 9333 7.504 0.857 0.960 0.951 0.960 0.989 0.978 0.880 0.929 GUanylate Kinase [Source:RefSeq peptide;Acc:NP_491243]
27. Y106G6E.6 csnk-1 11517 7.504 0.928 0.969 0.951 0.969 0.976 0.961 0.897 0.853 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
28. F49E11.1 mbk-2 30367 7.493 0.978 0.971 0.970 0.971 0.974 0.940 0.884 0.805 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
29. Y59A8A.3 tcc-1 20646 7.491 0.965 0.982 0.982 0.982 0.974 0.965 0.869 0.772 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
30. F01G4.1 swsn-4 14710 7.491 0.964 0.952 0.980 0.952 0.980 0.980 0.910 0.773 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
31. Y63D3A.6 dnj-29 11593 7.491 0.942 0.952 0.930 0.952 0.967 0.966 0.917 0.865 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493463]
32. H15N14.2 nsf-1 3900 7.487 0.927 0.974 0.916 0.974 0.968 0.952 0.851 0.925 Vesicle-fusing ATPase [Source:UniProtKB/Swiss-Prot;Acc:Q94392]
33. F58G11.2 rde-12 6935 7.487 0.937 0.952 0.970 0.952 0.979 0.965 0.871 0.861 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
34. K07A1.8 ile-1 16218 7.481 0.914 0.963 0.956 0.963 0.931 0.963 0.913 0.878 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
35. F38H4.9 let-92 25368 7.479 0.890 0.968 0.955 0.968 0.976 0.965 0.902 0.855 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
36. Y77E11A.13 npp-20 5777 7.473 0.905 0.975 0.959 0.975 0.982 0.960 0.871 0.846 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
37. F26E4.11 hrdl-1 14721 7.469 0.974 0.985 0.988 0.985 0.947 0.903 0.866 0.821 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
38. Y71H2B.10 apb-1 10457 7.466 0.878 0.954 0.940 0.954 0.988 0.990 0.886 0.876 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
39. C01G10.11 unc-76 13558 7.466 0.955 0.978 0.957 0.978 0.964 0.949 0.871 0.814 UNC-76 [Source:UniProtKB/TrEMBL;Acc:Q7JNU9]
40. C39F7.4 rab-1 44088 7.462 0.896 0.959 0.927 0.959 0.974 0.939 0.897 0.911 RAB family [Source:RefSeq peptide;Acc:NP_503397]
41. ZC518.2 sec-24.2 13037 7.459 0.882 0.951 0.917 0.951 0.982 0.978 0.909 0.889 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
42. Y54F10AM.4 ceh-44 5910 7.456 0.923 0.955 0.971 0.955 0.944 0.945 0.888 0.875 Homeobox protein cut-like ceh-44 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL02]
43. C50F4.14 nstp-10 4932 7.449 0.958 0.961 0.965 0.961 0.957 0.948 0.844 0.855 GDP-fucose transporter [Source:UniProtKB/Swiss-Prot;Acc:Q968A5]
44. ZK675.1 ptc-1 18468 7.446 0.973 0.950 0.952 0.950 0.986 0.949 0.877 0.809 Protein patched homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09614]
45. F42G9.5 alh-11 5722 7.444 0.952 0.975 0.963 0.975 0.927 0.970 0.893 0.789 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
46. Y17G7B.17 Y17G7B.17 11197 7.444 0.955 0.955 0.972 0.955 0.981 0.930 0.890 0.806
47. C16C10.7 rnf-5 7067 7.443 0.940 0.978 0.961 0.978 0.937 0.950 0.814 0.885 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
48. Y77E11A.11 clp-7 4352 7.44 0.914 0.960 0.946 0.960 0.976 0.973 0.888 0.823 CaLPain family [Source:RefSeq peptide;Acc:NP_500082]
49. C10C6.6 catp-8 8079 7.438 0.960 0.953 0.948 0.953 0.970 0.981 0.877 0.796 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
50. F29F11.6 gsp-1 27907 7.438 0.866 0.938 0.920 0.938 0.969 0.943 0.916 0.948 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
51. T12D8.6 mlc-5 19567 7.437 0.901 0.983 0.969 0.983 0.981 0.942 0.900 0.778 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
52. C17D12.1 dhhc-7 6002 7.437 0.980 0.985 0.976 0.985 0.980 0.930 0.909 0.692 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
53. F49D11.9 tag-296 7973 7.435 0.944 0.974 0.970 0.974 0.945 0.962 0.891 0.775
54. C24F3.1 tram-1 21190 7.432 0.884 0.959 0.874 0.959 0.977 0.974 0.930 0.875 Translocating chain-associated membrane protein [Source:RefSeq peptide;Acc:NP_501869]
55. C05C10.6 ufd-3 6304 7.431 0.956 0.961 0.963 0.961 0.973 0.944 0.900 0.773 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
56. C16C10.1 C16C10.1 4030 7.431 0.966 0.935 0.960 0.935 0.963 0.949 0.905 0.818 Uncharacterized mitochondrial carrier C16C10.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09461]
57. Y54E10A.3 txl-1 5426 7.43 0.822 0.971 0.963 0.971 0.971 0.981 0.900 0.851 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
58. C16C10.5 rnf-121 4043 7.429 0.961 0.977 0.940 0.977 0.960 0.947 0.842 0.825 RING finger protein 121 [Source:RefSeq peptide;Acc:NP_497832]
59. F12F6.6 sec-24.1 10754 7.428 0.884 0.928 0.934 0.928 0.976 0.976 0.900 0.902 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
60. Y71F9AM.4 cogc-3 2678 7.426 0.898 0.953 0.921 0.953 0.976 0.970 0.871 0.884 Conserved Oligomeric Golgi (COG) Component [Source:RefSeq peptide;Acc:NP_001021806]
61. F26E4.1 sur-6 16191 7.426 0.946 0.977 0.960 0.977 0.965 0.917 0.855 0.829 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
62. ZK353.7 cutc-1 5788 7.425 0.891 0.955 0.950 0.955 0.968 0.961 0.874 0.871 Copper homeostasis protein cutC homolog [Source:UniProtKB/Swiss-Prot;Acc:P34630]
63. Y55D9A.1 efa-6 10012 7.424 0.975 0.958 0.983 0.958 0.978 0.941 0.870 0.761 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
64. C17H12.1 dyci-1 9858 7.423 0.901 0.955 0.956 0.955 0.959 0.984 0.927 0.786 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
65. F40F12.5 cyld-1 10757 7.422 0.964 0.962 0.960 0.962 0.964 0.950 0.879 0.781 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
66. W09D10.4 W09D10.4 7486 7.419 0.903 0.947 0.941 0.947 0.958 0.967 0.909 0.847
67. F58G11.1 letm-1 13414 7.417 0.927 0.959 0.948 0.959 0.981 0.967 0.886 0.790 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
68. F40F9.1 xbx-6 23586 7.416 0.945 0.974 0.969 0.974 0.914 0.936 0.828 0.876 X-BoX promoter element regulated [Source:RefSeq peptide;Acc:NP_741597]
69. C47G2.5 saps-1 7555 7.416 0.928 0.963 0.971 0.963 0.980 0.935 0.864 0.812 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
70. Y116A8C.12 arf-6 3134 7.414 0.945 0.905 0.911 0.905 0.964 0.977 0.923 0.884 ADP-Ribosylation Factor related [Source:RefSeq peptide;Acc:NP_503011]
71. ZK520.4 cul-2 6732 7.414 0.949 0.941 0.968 0.941 0.946 0.963 0.873 0.833 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
72. C18E9.10 sftd-3 4611 7.414 0.855 0.947 0.940 0.947 0.966 0.956 0.914 0.889 SFT2 Domain containing protein 3 homolog [Source:RefSeq peptide;Acc:NP_495905]
73. C43G2.1 paqr-1 17585 7.413 0.900 0.979 0.965 0.979 0.964 0.970 0.837 0.819 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
74. Y17G7B.18 Y17G7B.18 3107 7.411 0.916 0.921 0.957 0.921 0.931 0.963 0.864 0.938 Probable RNA methyltransferase Y17G7B.18 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2R0]
75. ZK858.7 ZK858.7 2817 7.41 0.899 0.963 0.961 0.963 0.947 0.969 0.868 0.840
76. C26C6.5 dcp-66 9828 7.41 0.900 0.950 0.962 0.950 0.964 0.971 0.887 0.826 Deacetylase Complex Protein [Source:RefSeq peptide;Acc:NP_492111]
77. Y18D10A.13 pad-1 7180 7.407 0.934 0.898 0.949 0.898 0.979 0.975 0.863 0.911
78. C02F4.1 ced-5 9096 7.407 0.924 0.964 0.981 0.964 0.981 0.965 0.860 0.768 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
79. B0464.5 spk-1 35112 7.404 0.914 0.932 0.941 0.932 0.963 0.955 0.896 0.871 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
80. T21E12.4 dhc-1 20370 7.402 0.922 0.938 0.943 0.938 0.985 0.975 0.905 0.796 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
81. F25H2.8 ubc-25 12368 7.399 0.968 0.982 0.967 0.982 0.979 0.950 0.857 0.714 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
82. H06H21.6 ubxn-6 9202 7.399 0.942 0.953 0.969 0.953 0.961 0.961 0.881 0.779 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
83. C13B4.2 usp-14 9000 7.398 0.936 0.968 0.986 0.968 0.978 0.944 0.874 0.744 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
84. T06D8.8 rpn-9 11282 7.396 0.939 0.977 0.971 0.977 0.965 0.956 0.873 0.738 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
85. K08D12.1 pbs-1 21677 7.396 0.912 0.971 0.969 0.971 0.971 0.946 0.887 0.769 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
86. Y46G5A.12 vps-2 5685 7.394 0.909 0.938 0.974 0.938 0.975 0.966 0.878 0.816 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
87. Y46G5A.17 cpt-1 14412 7.393 0.979 0.973 0.965 0.973 0.926 0.967 0.831 0.779 Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_496721]
88. K02F2.1 dpf-3 11465 7.392 0.939 0.973 0.979 0.973 0.974 0.905 0.842 0.807 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
89. F52G2.2 rsd-2 5046 7.392 0.958 0.960 0.941 0.960 0.985 0.987 0.876 0.725
90. Y75B8A.25 Y75B8A.25 4741 7.392 0.913 0.948 0.915 0.948 0.959 0.958 0.863 0.888
91. F16D3.2 rsd-6 8211 7.391 0.979 0.971 0.955 0.971 0.981 0.914 0.884 0.736
92. ZK287.5 rbx-1 13546 7.39 0.933 0.958 0.983 0.958 0.980 0.956 0.885 0.737 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
93. Y94H6A.9 ubxn-2 7082 7.39 0.931 0.959 0.966 0.959 0.976 0.953 0.906 0.740 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
94. T20F5.2 pbs-4 8985 7.389 0.857 0.972 0.969 0.972 0.984 0.965 0.908 0.762 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
95. K05C4.1 pbs-5 17648 7.388 0.901 0.951 0.958 0.951 0.972 0.966 0.849 0.840 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
96. Y110A7A.17 mat-1 3797 7.388 0.966 0.935 0.946 0.935 0.975 0.930 0.859 0.842 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
97. Y57A10A.18 pqn-87 31844 7.387 0.904 0.949 0.955 0.949 0.960 0.943 0.824 0.903 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
98. C06A1.1 cdc-48.1 52743 7.385 0.894 0.972 0.973 0.972 0.951 0.968 0.882 0.773 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
99. Y46H3A.6 gly-7 7098 7.385 0.934 0.983 0.961 0.983 0.950 0.847 0.842 0.885 Probable N-acetylgalactosaminyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O61397]
100. M7.1 let-70 85699 7.384 0.923 0.968 0.950 0.968 0.940 0.942 0.847 0.846 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]

There are 2472 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA