C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R05D3.2

Gene ID Gene Name Reads Transcripts Annotation
R05D3.2 R05D3.2 5060 R05D3.2 LIMR family protein R05D3.2 [Source:UniProtKB/Swiss-Prot;Acc:P34535]

Genes with expression patterns similar to R05D3.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R05D3.2 R05D3.2 5060 2 - 1.000 - 1.000 - - - - LIMR family protein R05D3.2 [Source:UniProtKB/Swiss-Prot;Acc:P34535]
2. Y71F9AL.18 parp-1 3736 1.97 - 0.985 - 0.985 - - - - Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
3. R06F6.8 R06F6.8 3035 1.966 - 0.983 - 0.983 - - - - Guanine nucleotide exchange factor subunit R06F6.8 [Source:UniProtKB/Swiss-Prot;Acc:Q09417]
4. Y54E10A.5 dnc-6 4442 1.964 - 0.982 - 0.982 - - - - Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]
5. C27F2.10 C27F2.10 4214 1.964 - 0.982 - 0.982 - - - - PCI domain-containing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95QU0]
6. W09G3.6 W09G3.6 4437 1.964 - 0.982 - 0.982 - - - -
7. T09A5.8 cec-3 5813 1.964 - 0.982 - 0.982 - - - - Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
8. ZK20.3 rad-23 35070 1.964 - 0.982 - 0.982 - - - -
9. B0393.6 B0393.6 5169 1.962 - 0.981 - 0.981 - - - -
10. Y49E10.6 his-72 32293 1.96 - 0.980 - 0.980 - - - - Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
11. ZK858.1 gld-4 14162 1.96 - 0.980 - 0.980 - - - - Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
12. Y102E9.2 Y102E9.2 15286 1.96 - 0.980 - 0.980 - - - - tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q23232]
13. F32H2.4 thoc-3 3861 1.96 - 0.980 - 0.980 - - - - THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
14. F10C5.2 F10C5.2 5602 1.96 - 0.980 - 0.980 - - - -
15. C18G1.5 hil-4 21692 1.96 - 0.980 - 0.980 - - - - Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
16. EEED8.1 tofu-6 3962 1.958 - 0.979 - 0.979 - - - - Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
17. R01H2.6 ubc-18 13394 1.958 - 0.979 - 0.979 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
18. F16A11.2 rtcb-1 2276 1.958 - 0.979 - 0.979 - - - - tRNA-splicing ligase RtcB homolog [Source:UniProtKB/Swiss-Prot;Acc:P90838]
19. R12E2.2 suco-1 10408 1.956 - 0.978 - 0.978 - - - - SUn (SUN) domain Containing Ossification factor homolog [Source:RefSeq peptide;Acc:NP_491321]
20. F18A1.5 rpa-1 3109 1.956 - 0.978 - 0.978 - - - - Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
21. Y47G6A.2 inx-22 3576 1.956 - 0.978 - 0.978 - - - - Innexin [Source:RefSeq peptide;Acc:NP_491186]
22. C26E6.7 eri-9 8069 1.956 - 0.978 - 0.978 - - - - Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
23. C47E12.5 uba-1 36184 1.954 - 0.977 - 0.977 - - - - UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
24. Y69A2AR.2 ric-8 4224 1.954 - 0.977 - 0.977 - - - - Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
25. R12C12.2 ran-5 14517 1.954 - 0.977 - 0.977 - - - - associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
26. F21D5.2 otub-3 8469 1.954 - 0.977 - 0.977 - - - - OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
27. T26A5.7 set-1 6948 1.954 - 0.977 - 0.977 - - - - Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
28. F54D5.2 F54D5.2 2566 1.954 - 0.977 - 0.977 - - - -
29. F54E7.3 par-3 8773 1.954 - 0.977 - 0.977 - - - - Partitioning defective protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q17353]
30. K10B2.5 ani-2 11397 1.954 - 0.977 - 0.977 - - - - Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
31. F59G1.3 vps-35 9577 1.954 - 0.977 - 0.977 - - - - Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
32. R02F2.4 R02F2.4 2756 1.954 - 0.977 - 0.977 - - - -
33. F22D6.2 F22D6.2 38710 1.954 - 0.977 - 0.977 - - - -
34. W03G1.6 pig-1 5015 1.952 - 0.976 - 0.976 - - - - Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
35. T24D1.5 har-2 2882 1.952 - 0.976 - 0.976 - - - -
36. Y39G10AR.2 zwl-1 3666 1.952 - 0.976 - 0.976 - - - - Protein zwilch homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95XP9]
37. M04F3.1 rpa-2 4944 1.952 - 0.976 - 0.976 - - - - Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
38. Y63D3A.8 Y63D3A.8 9808 1.952 - 0.976 - 0.976 - - - -
39. T14G10.6 tsp-12 10308 1.952 - 0.976 - 0.976 - - - - Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
40. Y39G10AR.13 icp-1 3445 1.952 - 0.976 - 0.976 - - - - InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
41. K01C8.5 gei-14 2094 1.952 - 0.976 - 0.976 - - - - GEX Interacting protein [Source:RefSeq peptide;Acc:NP_495745]
42. C14B1.2 C14B1.2 8352 1.952 - 0.976 - 0.976 - - - -
43. K08D12.1 pbs-1 21677 1.95 - 0.975 - 0.975 - - - - Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
44. C09G4.3 cks-1 17852 1.95 - 0.975 - 0.975 - - - - Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
45. F59A3.4 F59A3.4 11625 1.95 - 0.975 - 0.975 - - - -
46. C13F10.7 C13F10.7 6641 1.95 - 0.975 - 0.975 - - - -
47. F18A1.6 alfa-1 2325 1.95 - 0.975 - 0.975 - - - - ALS/FTD Associated gene homolog [Source:RefSeq peptide;Acc:NP_495604]
48. T23G7.5 pir-1 2816 1.95 - 0.975 - 0.975 - - - - Phosphatase Interacting with RNA/RNP [Source:RefSeq peptide;Acc:NP_495959]
49. T22C1.1 T22C1.1 7329 1.95 - 0.975 - 0.975 - - - -
50. F26F4.7 nhl-2 13541 1.95 - 0.975 - 0.975 - - - - NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
51. C27A2.3 ify-1 13926 1.95 - 0.975 - 0.975 - - - - Interactor of FizzY protein [Source:RefSeq peptide;Acc:NP_494931]
52. F43G9.9 cpn-1 14505 1.948 - 0.974 - 0.974 - - - - CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
53. C03D6.4 npp-14 4889 1.948 - 0.974 - 0.974 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
54. Y57E12AL.1 Y57E12AL.1 13760 1.948 - 0.974 - 0.974 - - - -
55. W03D2.4 pcn-1 20288 1.948 - 0.974 - 0.974 - - - - Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
56. Y63D3A.4 tdpt-1 2906 1.948 - 0.974 - 0.974 - - - - 5'-tyrosyl-DNA phosphodiesterase [Source:UniProtKB/Swiss-Prot;Acc:Q9XWG3]
57. F20G4.3 nmy-2 27210 1.948 - 0.974 - 0.974 - - - - Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
58. M7.1 let-70 85699 1.948 - 0.974 - 0.974 - - - - Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
59. F52C9.7 mog-3 9880 1.948 - 0.974 - 0.974 - - - - Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
60. Y37A1B.2 lst-4 11343 1.948 - 0.974 - 0.974 - - - - Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
61. R08C7.3 htz-1 32725 1.948 - 0.974 - 0.974 - - - - Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
62. F56C9.3 F56C9.3 7447 1.948 - 0.974 - 0.974 - - - -
63. T26A5.9 dlc-1 59038 1.948 - 0.974 - 0.974 - - - - Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
64. T01B7.4 cyn-11 2088 1.948 - 0.974 - 0.974 - - - - Peptidyl-prolyl cis-trans isomerase 11 [Source:UniProtKB/Swiss-Prot;Acc:P52018]
65. F55C12.5 F55C12.5 8825 1.948 - 0.974 - 0.974 - - - -
66. Y46G5A.12 vps-2 5685 1.948 - 0.974 - 0.974 - - - - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
67. F37A4.8 isw-1 9337 1.948 - 0.974 - 0.974 - - - - Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
68. F44C4.4 gon-14 3947 1.948 - 0.974 - 0.974 - - - -
69. Y49A3A.1 cept-2 8916 1.948 - 0.974 - 0.974 - - - - Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
70. D1037.4 rab-8 14097 1.948 - 0.974 - 0.974 - - - - RAB family [Source:RefSeq peptide;Acc:NP_491199]
71. K08F4.1 K08F4.1 1085 1.948 - 0.974 - 0.974 - - - -
72. T07C4.3 T07C4.3 18064 1.946 - 0.973 - 0.973 - - - -
73. Y62E10A.12 lsm-3 4322 1.946 - 0.973 - 0.973 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
74. Y110A2AR.1 Y110A2AR.1 6664 1.946 - 0.973 - 0.973 - - - - Receptor expression-enhancing protein [Source:RefSeq peptide;Acc:NP_494399]
75. C12D8.1 C12D8.1 4255 1.946 - 0.973 - 0.973 - - - -
76. Y41C4A.10 elb-1 9743 1.946 - 0.973 - 0.973 - - - - ELongin B [Source:RefSeq peptide;Acc:NP_499517]
77. H26D21.2 msh-2 2115 1.946 - 0.973 - 0.973 - - - - MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
78. C06A1.1 cdc-48.1 52743 1.946 - 0.973 - 0.973 - - - - Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
79. T04A8.14 emb-5 11746 1.946 - 0.973 - 0.973 - - - - Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
80. C05D2.10 C05D2.10 2467 1.946 - 0.973 - 0.973 - - - -
81. F12F6.7 F12F6.7 5217 1.946 - 0.973 - 0.973 - - - - Probable DNA polymerase delta small subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19366]
82. F48E8.7 skpt-1 2308 1.946 - 0.973 - 0.973 - - - - SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
83. Y18D10A.20 pfn-1 33871 1.946 - 0.973 - 0.973 - - - - Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
84. T27A3.2 usp-5 11388 1.946 - 0.973 - 0.973 - - - - Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
85. C05D11.7 atgl-1 4096 1.946 - 0.973 - 0.973 - - - - Adipose TriGlyceride Lipase [Source:RefSeq peptide;Acc:NP_741196]
86. C42C1.8 C42C1.8 2751 1.946 - 0.973 - 0.973 - - - -
87. Y47G6A.20 rnp-6 5542 1.946 - 0.973 - 0.973 - - - - RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
88. Y54F10AL.2 smg-6 7150 1.946 - 0.973 - 0.973 - - - - Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_497566]
89. K07A12.2 egg-6 18331 1.946 - 0.973 - 0.973 - - - - Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
90. T05B11.3 clic-1 19766 1.946 - 0.973 - 0.973 - - - - Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
91. F54D5.14 smc-6 10569 1.946 - 0.973 - 0.973 - - - - SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_496476]
92. F57C2.6 spat-1 5615 1.946 - 0.973 - 0.973 - - - - Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
93. B0361.2 B0361.2 2707 1.946 - 0.973 - 0.973 - - - - CWF19-like protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q10946]
94. W01A11.1 W01A11.1 12142 1.944 - 0.972 - 0.972 - - - -
95. W08D2.5 catp-6 7281 1.944 - 0.972 - 0.972 - - - - Probable cation-transporting ATPase W08D2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q27533]
96. K07A1.12 lin-53 15817 1.944 - 0.972 - 0.972 - - - - Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
97. W01B6.9 ndc-80 4670 1.944 - 0.972 - 0.972 - - - - Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
98. F59G1.5 ptp-2 7879 1.944 - 0.972 - 0.972 - - - - Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
99. Y46G5A.17 cpt-1 14412 1.944 - 0.972 - 0.972 - - - - Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_496721]
100. F45E12.3 cul-4 3393 1.944 - 0.972 - 0.972 - - - - Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]

There are 947 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA