C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R53.5

Gene ID Gene Name Reads Transcripts Annotation
R53.5 R53.5 5395 R53.5

Genes with expression patterns similar to R53.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R53.5 R53.5 5395 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. T03D3.5 T03D3.5 2636 7.679 0.981 0.913 0.972 0.913 0.983 0.986 0.956 0.975
3. F27C1.7 atp-3 123967 7.66 0.980 0.911 0.957 0.911 0.972 0.989 0.967 0.973 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
4. Y37D8A.14 cco-2 79181 7.65 0.990 0.914 0.981 0.914 0.975 0.991 0.913 0.972 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
5. C53A5.1 ril-1 71564 7.64 0.988 0.895 0.969 0.895 0.984 0.987 0.938 0.984 RNAi-Induced Longevity [Source:RefSeq peptide;Acc:NP_506598]
6. T05H4.13 alh-4 60430 7.64 0.989 0.893 0.972 0.893 0.976 0.993 0.950 0.974 Aldehyde dehydrogenase [Source:RefSeq peptide;Acc:NP_741553]
7. F56D2.1 ucr-1 38050 7.626 0.973 0.912 0.969 0.912 0.945 0.985 0.961 0.969 Cytochrome b-c1 complex subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P98080]
8. K04G7.4 nuo-4 26042 7.61 0.967 0.929 0.971 0.929 0.950 0.989 0.937 0.938 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_741215]
9. C06H2.1 atp-5 67526 7.597 0.985 0.895 0.959 0.895 0.984 0.978 0.943 0.958 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_505829]
10. F54D8.2 tag-174 52859 7.575 0.963 0.892 0.981 0.892 0.967 0.975 0.934 0.971 Probable cytochrome c oxidase subunit 6A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20779]
11. C16A3.6 C16A3.6 11397 7.574 0.979 0.891 0.978 0.891 0.944 0.972 0.940 0.979
12. C54G4.8 cyc-1 42516 7.557 0.973 0.882 0.954 0.882 0.978 0.981 0.936 0.971 CYtochrome C [Source:RefSeq peptide;Acc:NP_492207]
13. R05G6.7 vdac-1 202445 7.548 0.975 0.914 0.965 0.914 0.966 0.954 0.905 0.955 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
14. T20G5.2 cts-1 122740 7.546 0.982 0.897 0.966 0.897 0.950 0.948 0.949 0.957 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
15. R04F11.3 R04F11.3 10000 7.54 0.986 0.852 0.961 0.852 0.968 0.985 0.966 0.970
16. F33A8.5 sdhd-1 35107 7.538 0.975 0.895 0.963 0.895 0.971 0.982 0.909 0.948 Putative succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O62215]
17. F42G8.12 isp-1 85063 7.527 0.965 0.897 0.966 0.897 0.982 0.985 0.876 0.959 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
18. F43G9.1 idha-1 35495 7.502 0.963 0.893 0.958 0.893 0.949 0.991 0.904 0.951 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93714]
19. F26E4.9 cco-1 39100 7.499 0.981 0.869 0.965 0.869 0.973 0.976 0.914 0.952 Cytochrome C Oxidase [Source:RefSeq peptide;Acc:NP_492601]
20. C16C10.11 har-1 65692 7.496 0.987 0.903 0.963 0.903 0.955 0.961 0.904 0.920 Hemiasterlin resistant protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09254]
21. Y45G12B.1 nuo-5 30790 7.492 0.952 0.915 0.949 0.915 0.950 0.990 0.885 0.936 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_503733]
22. F45H10.3 F45H10.3 21187 7.489 0.982 0.881 0.971 0.881 0.941 0.969 0.914 0.950
23. Y57G11C.12 nuo-3 34963 7.485 0.957 0.910 0.931 0.910 0.964 0.983 0.885 0.945 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_502790]
24. F42G9.1 F42G9.1 16349 7.485 0.961 0.882 0.957 0.882 0.958 0.987 0.903 0.955 Probable protein phosphatase 2C F42G9.1 [Source:UniProtKB/Swiss-Prot;Acc:P49595]
25. ZK973.10 lpd-5 11309 7.481 0.980 0.927 0.925 0.927 0.957 0.954 0.876 0.935 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491359]
26. W10D5.2 nduf-7 21374 7.481 0.952 0.914 0.929 0.914 0.935 0.964 0.899 0.974 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94360]
27. F36A2.9 F36A2.9 9829 7.473 0.987 0.875 0.947 0.875 0.961 0.961 0.892 0.975
28. B0546.1 mai-2 28256 7.468 0.986 0.904 0.953 0.904 0.946 0.975 0.855 0.945 ATPase inhibitor mai-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44441]
29. W02F12.5 dlst-1 55841 7.466 0.964 0.930 0.952 0.930 0.933 0.965 0.853 0.939 DihydroLipoamide S-SuccinylTransferase [Source:RefSeq peptide;Acc:NP_504700]
30. C34E10.6 atp-2 203881 7.463 0.962 0.880 0.971 0.880 0.975 0.914 0.918 0.963 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
31. F22D6.4 nduf-6 10303 7.453 0.970 0.891 0.958 0.891 0.959 0.974 0.883 0.927 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19724]
32. F42A8.2 sdhb-1 44720 7.448 0.975 0.895 0.949 0.895 0.964 0.966 0.877 0.927 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09545]
33. LLC1.3 dld-1 54027 7.443 0.953 0.921 0.958 0.921 0.956 0.929 0.833 0.972 Dihydrolipoyl dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O17953]
34. F33A8.3 cey-1 94306 7.441 0.942 0.917 0.942 0.917 0.965 0.951 0.870 0.937 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
35. F53F4.11 F53F4.11 6048 7.441 0.980 0.902 0.969 0.902 0.952 0.972 0.868 0.896
36. ZK829.4 gdh-1 63617 7.425 0.980 0.874 0.961 0.874 0.939 0.975 0.928 0.894 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
37. F23B12.5 dlat-1 15659 7.423 0.971 0.879 0.944 0.879 0.918 0.970 0.900 0.962 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19749]
38. Y34D9A.6 glrx-10 12368 7.41 0.963 0.925 0.914 0.925 0.930 0.939 0.856 0.958 GLutaRedoXin [Source:RefSeq peptide;Acc:NP_490812]
39. Y54E10BL.5 nduf-5 18790 7.402 0.982 0.885 0.914 0.885 0.946 0.983 0.928 0.879 NADH Ubiquinone oxidoreductase Fe-S protein [Source:RefSeq peptide;Acc:NP_491085]
40. Y63D3A.8 Y63D3A.8 9808 7.4 0.975 0.857 0.954 0.857 0.962 0.981 0.848 0.966
41. Y75B12B.5 cyn-3 34388 7.393 0.953 0.949 0.950 0.949 0.900 0.910 0.868 0.914 Peptidyl-prolyl cis-trans isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:P52011]
42. T05H10.5 ufd-2 30044 7.391 0.925 0.904 0.914 0.904 0.928 0.972 0.917 0.927 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
43. ZK970.4 vha-9 43596 7.377 0.968 0.900 0.963 0.900 0.900 0.919 0.869 0.958 Probable V-type proton ATPase subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q23680]
44. C09H10.3 nuo-1 20380 7.368 0.979 0.891 0.961 0.891 0.941 0.969 0.810 0.926 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_496376]
45. Y67D2.3 cisd-3.2 13419 7.358 0.972 0.912 0.943 0.912 0.929 0.955 0.868 0.867 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497419]
46. W01A8.4 nuo-6 10948 7.351 0.969 0.879 0.935 0.879 0.921 0.947 0.886 0.935 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_492001]
47. T21C9.5 lpd-9 13226 7.339 0.965 0.841 0.958 0.841 0.926 0.981 0.884 0.943 LiPid Depleted [Source:RefSeq peptide;Acc:NP_001256229]
48. C15F1.7 sod-1 36504 7.321 0.977 0.922 0.932 0.922 0.884 0.918 0.850 0.916 Superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34697]
49. Y51H4A.3 rho-1 32656 7.319 0.931 0.928 0.857 0.928 0.946 0.955 0.830 0.944 Ras-like GTP-binding protein rhoA [Source:UniProtKB/Swiss-Prot;Acc:Q22038]
50. T10E9.7 nuo-2 15230 7.305 0.956 0.928 0.928 0.928 0.934 0.944 0.810 0.877 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_491881]
51. Y71H2AM.5 Y71H2AM.5 82252 7.304 0.953 0.871 0.934 0.871 0.946 0.940 0.842 0.947
52. C33A12.3 C33A12.3 8034 7.301 0.964 0.868 0.936 0.868 0.910 0.950 0.880 0.925
53. F20H11.3 mdh-2 116657 7.299 0.969 0.869 0.927 0.869 0.969 0.937 0.854 0.905 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
54. F29C4.2 F29C4.2 58079 7.298 0.986 0.790 0.980 0.790 0.963 0.969 0.892 0.928
55. C04C3.3 pdhb-1 30950 7.287 0.956 0.872 0.916 0.872 0.920 0.931 0.888 0.932 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44451]
56. F01G10.1 tkt-1 37942 7.269 0.962 0.865 0.967 0.865 0.908 0.915 0.883 0.904 TransKeTolase homolog [Source:RefSeq peptide;Acc:NP_501878]
57. F27D4.4 F27D4.4 19502 7.263 0.966 0.894 0.949 0.894 0.920 0.898 0.826 0.916 Zinc finger CCCH domain-containing protein 15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93618]
58. C01G8.5 erm-1 32200 7.255 0.967 0.910 0.964 0.910 0.934 0.904 0.805 0.861 Ezrin/Radixin/Moesin [Source:RefSeq peptide;Acc:NP_491559]
59. Y17G7B.7 tpi-1 19678 7.25 0.963 0.867 0.937 0.867 0.879 0.931 0.872 0.934 Triosephosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q10657]
60. Y67H2A.7 Y67H2A.7 1900 7.247 0.987 0.768 0.955 0.768 0.969 0.966 0.901 0.933
61. C38C3.5 unc-60 39186 7.242 0.979 0.898 0.921 0.898 0.893 0.926 0.796 0.931 Actin-depolymerizing factor 2, isoform c [Source:UniProtKB/Swiss-Prot;Acc:Q07749]
62. W02D3.1 cytb-5.2 12965 7.24 0.942 0.856 0.946 0.856 0.923 0.961 0.826 0.930 YTochrome B [Source:RefSeq peptide;Acc:NP_491931]
63. F53F10.4 unc-108 41213 7.214 0.932 0.878 0.861 0.878 0.931 0.939 0.844 0.951 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
64. E04A4.7 cyc-2.1 233997 7.206 0.939 0.922 0.968 0.922 0.818 0.853 0.863 0.921 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
65. F55H2.2 vha-14 37918 7.203 0.980 0.860 0.935 0.860 0.906 0.917 0.823 0.922 V-type proton ATPase subunit D [Source:UniProtKB/Swiss-Prot;Acc:P34462]
66. F46A9.5 skr-1 31598 7.201 0.910 0.883 0.865 0.883 0.952 0.962 0.784 0.962 Skp1-related protein [Source:UniProtKB/Swiss-Prot;Acc:G5ECU1]
67. T02G5.8 kat-1 14385 7.198 0.970 0.829 0.924 0.829 0.947 0.941 0.842 0.916 Acetyl-CoA acetyltransferase homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22100]
68. F57C9.1 F57C9.1 1926 7.191 0.975 0.718 0.954 0.718 0.956 0.987 0.913 0.970 Putative pyridoxal kinase [Source:UniProtKB/Swiss-Prot;Acc:O01824]
69. Y71H2AM.6 Y71H2AM.6 623 7.186 0.986 0.715 0.979 0.715 0.934 0.972 0.916 0.969
70. B0336.2 arf-1.2 45317 7.175 0.976 0.922 0.931 0.922 0.916 0.909 0.779 0.820 ADP-ribosylation factor 1-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q10943]
71. M117.2 par-5 64868 7.175 0.953 0.933 0.929 0.933 0.936 0.883 0.788 0.820 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
72. C35B1.1 ubc-1 13805 7.174 0.893 0.826 0.852 0.826 0.957 0.974 0.915 0.931 Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P52478]
73. ZK809.5 ZK809.5 5228 7.169 0.958 0.842 0.958 0.842 0.904 0.915 0.827 0.923
74. ZK484.3 ZK484.3 9359 7.157 0.979 0.830 0.932 0.830 0.902 0.889 0.864 0.931
75. M7.1 let-70 85699 7.152 0.899 0.879 0.887 0.879 0.952 0.939 0.839 0.878 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
76. K11D9.2 sca-1 71133 7.148 0.927 0.897 0.894 0.897 0.955 0.894 0.813 0.871 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
77. F54H12.1 aco-2 11093 7.143 0.860 0.866 0.846 0.866 0.970 0.937 0.860 0.938 Probable aconitate hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34455]
78. C15F1.6 art-1 15767 7.141 0.952 0.872 0.935 0.872 0.895 0.886 0.814 0.915 Probable very-long-chain enoyl-CoA reductase art-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5Y2]
79. T04C12.5 act-2 157046 7.124 0.966 0.868 0.920 0.868 0.929 0.822 0.827 0.924 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
80. C47E12.4 pyp-1 16545 7.123 0.982 0.900 0.937 0.900 0.903 0.893 0.761 0.847 Probable inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18680]
81. B0491.6 B0491.6 1193 7.122 0.974 0.744 0.942 0.744 0.938 0.979 0.893 0.908
82. Y39A1C.3 cey-4 50694 7.119 0.959 0.940 0.943 0.940 0.866 0.859 0.789 0.823 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
83. T23H2.5 rab-10 31382 7.116 0.905 0.889 0.803 0.889 0.963 0.947 0.794 0.926 RAB family [Source:RefSeq peptide;Acc:NP_491857]
84. K07G5.6 fecl-1 7061 7.11 0.919 0.878 0.890 0.878 0.928 0.956 0.851 0.810 FErroChelatase-Like [Source:RefSeq peptide;Acc:NP_492023]
85. F49C12.13 vha-17 47854 7.097 0.956 0.854 0.948 0.854 0.862 0.877 0.813 0.933 V-type proton ATPase subunit e [Source:UniProtKB/Swiss-Prot;Acc:Q20591]
86. C56C10.3 vps-32.1 24107 7.095 0.895 0.883 0.819 0.883 0.939 0.867 0.857 0.952 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
87. F01G4.2 ard-1 20279 7.084 0.946 0.927 0.963 0.927 0.868 0.839 0.753 0.861 Alcohol/Ribitol Dehydrogenase family [Source:RefSeq peptide;Acc:NP_001293993]
88. T03F1.3 pgk-1 25964 7.084 0.873 0.831 0.870 0.831 0.940 0.952 0.875 0.912 Probable phosphoglycerate kinase [Source:UniProtKB/Swiss-Prot;Acc:P91427]
89. F36H9.3 dhs-13 21659 7.082 0.940 0.885 0.857 0.885 0.956 0.943 0.838 0.778 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
90. F56H11.4 elo-1 34626 7.076 0.968 0.855 0.884 0.855 0.916 0.891 0.803 0.904 Elongation of very long chain fatty acids protein [Source:RefSeq peptide;Acc:NP_001263767]
91. C24A11.9 coq-1 11564 7.072 0.953 0.801 0.939 0.801 0.899 0.899 0.847 0.933 COenzyme Q (ubiquinone) biosynthesis [Source:RefSeq peptide;Acc:NP_491588]
92. K07A12.3 asg-1 17070 7.063 0.942 0.950 0.924 0.950 0.887 0.864 0.763 0.783 Probable ATP synthase subunit g 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90921]
93. T07C4.5 ttr-15 76808 7.062 0.889 0.832 0.940 0.832 0.946 0.877 0.791 0.955 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
94. F54D8.3 alh-1 20926 7.052 0.957 0.911 0.925 0.911 0.935 0.935 0.846 0.632 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_498081]
95. F32D1.2 hpo-18 33234 7.046 0.977 0.883 0.905 0.883 0.941 0.834 0.760 0.863
96. F56H1.7 oxy-5 12425 7.045 0.955 0.863 0.905 0.863 0.905 0.907 0.777 0.870
97. C50F4.13 his-35 15877 7.045 0.952 0.823 0.922 0.823 0.916 0.879 0.818 0.912 Histone H2A [Source:RefSeq peptide;Acc:NP_505463]
98. Y56A3A.32 wah-1 13994 7.044 0.972 0.799 0.928 0.799 0.948 0.948 0.749 0.901 Worm AIF (apoptosis inducing factor) Homolog [Source:RefSeq peptide;Acc:NP_499564]
99. F54A3.6 F54A3.6 2565 7.038 0.934 0.795 0.884 0.795 0.963 0.931 0.808 0.928
100. W08G11.4 pptr-1 18411 7.036 0.881 0.877 0.839 0.877 0.953 0.924 0.768 0.917 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_507133]

There are 102 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA