C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F08B4.6

Gene ID Gene Name Reads Transcripts Annotation
F08B4.6 hst-1 1872 F08B4.6 Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 Heparan sulfate N-deacetylase 1 Heparan sulfate N-sulfotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q966W3]

Genes with expression patterns similar to F08B4.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F08B4.6 hst-1 1872 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 Heparan sulfate N-deacetylase 1 Heparan sulfate N-sulfotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q966W3]
2. C33H5.19 tag-321 5783 6.371 0.959 0.953 0.942 0.953 0.864 0.921 0.779 -
3. T24D1.1 sqv-5 12569 6.368 0.967 0.947 0.898 0.947 0.901 0.868 0.840 - Chondroitin sulfate synthase sqv-5 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z1Z1]
4. F43G6.9 patr-1 23000 6.358 0.963 0.944 0.927 0.944 0.867 0.833 0.880 - Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
5. K02A11.1 gfi-2 8382 6.335 0.959 0.964 0.907 0.964 0.905 0.882 0.754 - GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_492587]
6. F11A10.6 F11A10.6 8364 6.322 0.967 0.948 0.901 0.948 0.898 0.899 0.761 -
7. T20B12.8 hmg-4 4823 6.312 0.961 0.937 0.963 0.937 0.888 0.804 0.822 - FACT complex subunit SSRP1-A [Source:UniProtKB/Swiss-Prot;Acc:P41848]
8. Y57E12AL.5 mdt-6 3828 6.311 0.931 0.955 0.934 0.955 0.904 0.781 0.851 - Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
9. Y73B6A.5 lin-45 10864 6.306 0.960 0.951 0.899 0.951 0.871 0.847 0.827 - Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
10. C01F6.1 cpna-3 5414 6.287 0.942 0.954 0.914 0.954 0.942 0.869 0.712 - CoPiNe domain protein, Atypical [Source:RefSeq peptide;Acc:NP_501584]
11. T03D8.1 num-1 8909 6.287 0.958 0.950 0.896 0.950 0.875 0.832 0.826 - Numb-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTY6]
12. Y41D4B.13 ced-2 10100 6.286 0.953 0.958 0.896 0.958 0.859 0.835 0.827 - Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
13. DY3.7 sup-17 12176 6.277 0.951 0.945 0.899 0.945 0.839 0.843 0.855 - SUPpressor [Source:RefSeq peptide;Acc:NP_492377]
14. K04G2.6 vacl-14 3424 6.275 0.951 0.947 0.931 0.947 0.878 0.905 0.716 - VAC (yeast VACuole morphology)-Like [Source:RefSeq peptide;Acc:NP_492215]
15. F53E4.1 F53E4.1 7979 6.269 0.896 0.964 0.923 0.964 0.897 0.770 0.855 -
16. Y41C4A.10 elb-1 9743 6.263 0.904 0.956 0.931 0.956 0.868 0.847 0.801 - ELongin B [Source:RefSeq peptide;Acc:NP_499517]
17. R07H5.1 prx-14 5489 6.261 0.942 0.951 0.858 0.951 0.860 0.905 0.794 - PeRoXisome assembly factor [Source:RefSeq peptide;Acc:NP_502097]
18. R10E11.3 usp-46 3909 6.26 0.944 0.962 0.871 0.962 0.875 0.902 0.744 - Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
19. ZK858.4 mel-26 15994 6.25 0.948 0.964 0.855 0.964 0.892 0.909 0.718 - Protein maternal effect lethal 26 [Source:UniProtKB/Swiss-Prot;Acc:Q94420]
20. C18E3.2 swsn-2.2 3460 6.247 0.959 0.932 0.959 0.932 0.891 0.720 0.854 - SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_491329]
21. C28H8.1 bcl-7 2283 6.245 0.948 0.951 0.891 0.951 0.837 0.864 0.803 - BCL7-like protein C28H8.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09242]
22. B0365.1 acly-2 3554 6.236 0.928 0.899 0.962 0.899 0.884 0.820 0.844 - ATP-citrate synthase [Source:RefSeq peptide;Acc:NP_506267]
23. B0334.11 ooc-3 5475 6.235 0.980 0.956 0.872 0.956 0.900 0.720 0.851 -
24. K02B2.1 pfkb-1.2 8303 6.232 0.941 0.955 0.904 0.955 0.874 0.881 0.722 - 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 6-phosphofructo-2-kinase Fructose-2,6-bisphosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q21122]
25. F36H2.2 ent-6 3952 6.231 0.896 0.973 0.894 0.973 0.835 0.855 0.805 - Equilibrative Nucleoside Transporter [Source:RefSeq peptide;Acc:NP_001251033]
26. T01B7.6 trcs-2 9792 6.231 0.955 0.946 0.904 0.946 0.910 0.768 0.802 - TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
27. T14G10.6 tsp-12 10308 6.22 0.948 0.958 0.918 0.958 0.877 0.747 0.814 - Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
28. R13H4.4 hmp-1 7668 6.213 0.975 0.923 0.879 0.923 0.810 0.860 0.843 - Alpha-catenin-like protein hmp-1 [Source:UniProtKB/Swiss-Prot;Acc:P90947]
29. Y57G11C.36 Y57G11C.36 10590 6.199 0.960 0.938 0.867 0.938 0.808 0.849 0.839 -
30. W10D9.4 nfyb-1 2584 6.198 0.899 0.957 0.888 0.957 0.896 0.801 0.800 - Nuclear transcription Factor Y, B (beta) subunit [Source:RefSeq peptide;Acc:NP_493740]
31. PAR2.4 mig-22 12357 6.194 0.953 0.907 0.920 0.907 0.884 0.857 0.766 - Chondroitin sulfate synthase mig-22 [Source:UniProtKB/Swiss-Prot;Acc:P45895]
32. F22D3.1 ceh-38 8237 6.193 0.937 0.950 0.895 0.950 0.871 0.802 0.788 - Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720]
33. Y57G11C.13 arl-8 26649 6.179 0.942 0.950 0.892 0.950 0.847 0.876 0.722 - ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
34. F26F4.4 tag-340 7760 6.172 0.963 0.925 0.883 0.925 0.873 0.833 0.770 -
35. K07G5.1 crml-1 7787 6.171 0.951 0.960 0.958 0.960 0.749 0.792 0.801 - CARMIL (Capping, ARp2/3, Myosin I Linker protein) homolog [Source:RefSeq peptide;Acc:NP_492024]
36. Y106G6H.8 Y106G6H.8 7319 6.17 0.956 0.942 0.907 0.942 0.894 0.753 0.776 -
37. Y37E11AM.3 Y37E11AM.3 2883 6.165 0.973 0.899 0.894 0.899 0.844 0.853 0.803 -
38. F56C9.11 F56C9.11 4388 6.154 0.924 0.951 0.884 0.951 0.839 0.831 0.774 -
39. C35D10.16 arx-6 8242 6.152 0.910 0.957 0.891 0.957 0.866 0.828 0.743 - Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
40. C25D7.7 rap-2 6167 6.152 0.923 0.950 0.859 0.950 0.850 0.852 0.768 - RAP homolog (vertebrate Rap GTPase family) [Source:RefSeq peptide;Acc:NP_506707]
41. C36A4.5 maph-1.3 15493 6.147 0.969 0.884 0.887 0.884 0.895 0.830 0.798 - Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
42. F18A1.2 lin-26 8503 6.147 0.944 0.950 0.849 0.950 0.887 0.866 0.701 - Transcription factor lin-26 [Source:UniProtKB/Swiss-Prot;Acc:Q27355]
43. ZK632.1 mcm-6 9164 6.146 0.955 0.959 0.975 0.959 0.889 0.606 0.803 - DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
44. K04G2.2 aho-3 15189 6.146 0.957 0.921 0.902 0.921 0.899 0.762 0.784 -
45. C56A3.5 C56A3.5 2260 6.145 0.955 0.894 0.928 0.894 0.898 0.829 0.747 -
46. R10E11.4 sqv-3 5431 6.134 0.910 0.967 0.886 0.967 0.883 0.689 0.832 - Probable galactosyltransferase sqv-3 [Source:UniProtKB/Swiss-Prot;Acc:P34548]
47. F35H8.3 zfp-2 2599 6.129 0.970 0.959 0.867 0.959 0.894 0.716 0.764 - Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
48. C08B11.3 swsn-7 11608 6.129 0.952 0.944 0.911 0.944 0.873 0.739 0.766 - SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
49. F40F11.2 mig-38 5836 6.126 0.961 0.944 0.940 0.944 0.740 0.814 0.783 -
50. C05D2.6 madf-11 2430 6.123 0.952 0.919 0.912 0.919 0.881 0.829 0.711 - MADF domain transcription factor [Source:RefSeq peptide;Acc:NP_001033347]
51. T21E3.1 egg-4 7194 6.123 0.963 0.942 0.932 0.942 0.879 0.644 0.821 - EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491269]
52. C32E8.8 ptr-2 7774 6.122 0.943 0.924 0.957 0.924 0.879 0.733 0.762 - PaTched Related family [Source:RefSeq peptide;Acc:NP_491221]
53. F25B3.6 rtfo-1 11965 6.122 0.941 0.956 0.910 0.956 0.854 0.715 0.790 - RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
54. T09A12.4 nhr-66 4746 6.117 0.927 0.950 0.889 0.950 0.879 0.802 0.720 - Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001294133]
55. T12D8.1 set-16 5542 6.114 0.964 0.916 0.925 0.916 0.891 0.746 0.756 - Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_499819]
56. Y54E10A.4 fog-1 3560 6.114 0.965 0.957 0.901 0.957 0.896 0.691 0.747 - Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001021791]
57. B0393.2 rbg-3 6701 6.112 0.962 0.921 0.883 0.921 0.929 0.729 0.767 - RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]
58. T01G9.5 mei-1 2484 6.106 0.920 0.916 0.958 0.916 0.906 0.707 0.783 - Meiotic spindle formation protein mei-1 [Source:UniProtKB/Swiss-Prot;Acc:P34808]
59. C07F11.1 tol-1 4361 6.105 0.950 0.948 0.892 0.948 0.890 0.798 0.679 - TOLl (Drosophila) family [Source:RefSeq peptide;Acc:NP_001020983]
60. B0240.4 npp-22 5510 6.105 0.941 0.950 0.927 0.950 0.878 0.717 0.742 - Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
61. W02B9.1 hmr-1 13240 6.104 0.933 0.970 0.910 0.970 0.761 0.723 0.837 - Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]
62. F54C8.2 cpar-1 4110 6.091 0.960 0.919 0.949 0.919 0.903 0.689 0.752 - Histone H3-like centromeric protein cpar-1 [Source:UniProtKB/Swiss-Prot;Acc:P34440]
63. C27A2.6 dsh-2 2481 6.089 0.962 0.949 0.904 0.949 0.791 0.734 0.800 - LOW QUALITY PROTEIN: DiSHevelled related [Source:RefSeq peptide;Acc:NP_494937]
64. C06H2.6 lmtr-3 11122 6.084 0.959 0.949 0.940 0.949 0.735 0.840 0.712 - Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
65. R53.6 psf-1 4721 6.076 0.942 0.959 0.954 0.959 0.897 0.625 0.740 - Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
66. F29D10.4 hum-1 4048 6.067 0.931 0.953 0.901 0.953 0.807 0.881 0.641 - Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_492393]
67. ZK856.1 cul-5 2894 6.065 0.933 0.954 0.814 0.954 0.794 0.850 0.766 - Cullin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q23639]
68. W03F11.6 afd-1 8609 6.064 0.908 0.954 0.894 0.954 0.718 0.828 0.808 - AFaDin (actin filament binding protein) homolog [Source:RefSeq peptide;Acc:NP_001021660]
69. ZK930.1 vps-15 2445 6.05 0.950 0.912 0.855 0.912 0.862 0.830 0.729 - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001254323]
70. C01F6.4 fem-3 2478 6.049 0.967 0.936 0.923 0.936 0.877 0.633 0.777 - Sex-determination protein fem-3 [Source:UniProtKB/Swiss-Prot;Acc:P34691]
71. F54C8.5 rheb-1 6358 6.048 0.921 0.954 0.939 0.954 0.807 0.690 0.783 - GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
72. R06F6.1 cdl-1 14167 6.03 0.957 0.941 0.901 0.941 0.891 0.630 0.769 - Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
73. F47D12.4 hmg-1.2 13779 6.024 0.887 0.950 0.847 0.950 0.792 0.845 0.753 - High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
74. ZK353.1 cyy-1 5745 6.024 0.931 0.955 0.829 0.955 0.839 0.701 0.814 - Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
75. F26H9.6 rab-5 23942 6.021 0.935 0.950 0.921 0.950 0.740 0.843 0.682 - RAB family [Source:RefSeq peptide;Acc:NP_492481]
76. T14G10.3 ttr-53 7558 6.017 0.948 0.951 0.862 0.951 0.819 0.767 0.719 - TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_501856]
77. C33H5.15 sgo-1 3674 6.017 0.963 0.948 0.891 0.948 0.838 0.634 0.795 - Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
78. C32A3.3 rilp-1 7213 6.012 0.969 0.954 0.910 0.954 0.751 0.774 0.700 - RILP (Rab7-Interacting Lysosomal Protein) homolog [Source:RefSeq peptide;Acc:NP_741113]
79. F58G11.5 tag-65 3259 6.012 0.894 0.930 0.951 0.930 0.783 0.718 0.806 - SR-related CTD associated factor 6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED97]
80. H21P03.3 sms-1 7737 6.01 0.945 0.952 0.862 0.952 0.762 0.790 0.747 - Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
81. W02D3.9 unc-37 4395 6.004 0.956 0.966 0.948 0.966 0.815 0.658 0.695 - Transcription factor unc-37 [Source:UniProtKB/Swiss-Prot;Acc:O02482]
82. F40F9.7 drap-1 10298 5.995 0.952 0.954 0.877 0.954 0.724 0.776 0.758 - DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
83. F39B2.1 hinf-1 10002 5.99 0.947 0.956 0.887 0.956 0.846 0.716 0.682 - HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
84. R12E2.10 egg-5 9154 5.989 0.966 0.944 0.926 0.944 0.885 0.574 0.750 - EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491316]
85. D2092.2 ppfr-2 3944 5.985 0.956 0.933 0.915 0.933 0.859 0.672 0.717 - Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_491907]
86. F54F2.2 zfp-1 14753 5.982 0.961 0.913 0.880 0.913 0.821 0.752 0.742 - Uncharacterized protein F54F2.2, isoform a [Source:UniProtKB/Swiss-Prot;Acc:P34447]
87. ZK593.4 rbr-2 10600 5.978 0.912 0.951 0.947 0.951 0.824 0.627 0.766 - Lysine-specific demethylase rbr-2 [Source:UniProtKB/Swiss-Prot;Acc:Q23541]
88. T07C12.14 suds-3 3352 5.977 0.954 0.863 0.932 0.863 0.886 0.677 0.802 -
89. C14B1.4 wdr-5.1 4424 5.977 0.951 0.918 0.842 0.918 0.846 0.714 0.788 - WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
90. R09B3.4 ubc-12 7667 5.976 0.872 0.955 0.964 0.955 0.725 0.719 0.786 - NEDD8-conjugating enzyme ubc-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVK5]
91. C56C10.13 dnj-8 5329 5.972 0.929 0.956 0.944 0.956 0.741 0.690 0.756 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001040753]
92. R74.5 asd-1 6481 5.968 0.968 0.926 0.931 0.926 0.743 0.741 0.733 - RNA-binding protein ASD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEW7]
93. K07A1.2 dut-1 5203 5.966 0.919 0.946 0.951 0.946 0.780 0.605 0.819 - DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
94. T11F8.3 rme-2 9288 5.965 0.950 0.922 0.950 0.922 0.826 0.627 0.768 - Receptor Mediated Endocytosis [Source:RefSeq peptide;Acc:NP_001293685]
95. C10C6.1 kin-4 13566 5.962 0.967 0.935 0.915 0.935 0.795 0.658 0.757 - KIN-4 protein; Protein KINase [Source:UniProtKB/TrEMBL;Acc:G5EFA4]
96. C18E3.8 hop-1 1881 5.962 0.925 0.953 0.892 0.953 0.864 0.609 0.766 - Presenilin hop-1 [Source:UniProtKB/Swiss-Prot;Acc:O02100]
97. Y45F10C.3 fbxa-215 4016 5.959 0.962 0.945 0.904 0.945 0.845 0.591 0.767 - F-box A protein [Source:RefSeq peptide;Acc:NP_502641]
98. F29C12.3 rict-1 5292 5.959 0.933 0.957 0.917 0.957 0.808 0.682 0.705 -
99. F48E8.7 skpt-1 2308 5.959 0.948 0.906 0.950 0.906 0.845 0.627 0.777 - SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
100. Y49E10.14 pie-1 7902 5.959 0.952 0.943 0.916 0.943 0.907 0.562 0.736 - Pharynx and intestine in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94131]

There are 271 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA