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Experiment herm3, section s2.

Sample reads: 86. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K07H8.10 K07H8.10 2.00 23255.81
2. R10E11.1 cbp-1 2.00 23255.81
3. Y18D10A.17 car-1 2.00 23255.81 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
4. Y24D9A.4 rpl-7A 2.00 23255.81 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
5. Y42H9B.3 Y42H9B.3 2.00 23255.81
6. AH6.5 mex-6 1.00 11627.91 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
7. B0244.8 egg-1 1.00 11627.91 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_498237]
8. B0273.2 puf-7 1.00 11627.91 Pumilio domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O44169]
9. C01G6.1 aqp-2 1.00 11627.91 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_495972]
10. C02B10.2 snpn-1 1.00 11627.91 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
11. C07G1.4 wsp-1 1.00 11627.91 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
12. C14B9.7 rpl-21 1.00 11627.91 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
13. C14C10.5 C14C10.5 1.00 11627.91
14. C16A3.9 rps-13 1.00 11627.91 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
15. C27B7.1 spr-2 1.00 11627.91 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
16. C29E4.8 let-754 1.00 11627.91 Adenylate kinase [Source:UniProtKB/Swiss-Prot;Acc:P34346]
17. C37C3.6 mig-6 1.00 11627.91 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
18. C42C1.14 rpl-34 1.00 11627.91 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
19. C47B2.4 pbs-2 1.00 11627.91 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
20. C47B2.5 eif-6 1.00 11627.91 Eukaryotic translation initiation factor 6 [Source:UniProtKB/Swiss-Prot;Acc:O62106]
21. C47E12.5 uba-1 1.00 11627.91 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
22. C49H3.10 xpo-3 1.00 11627.91 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
23. C53D5.6 imb-3 1.00 11627.91 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
24. C53H9.1 rpl-27 1.00 11627.91 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
25. D1007.12 rpl-24.1 1.00 11627.91 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
26. F02A9.3 far-2 1.00 11627.91 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
27. F07D10.1 rpl-11.2 1.00 11627.91 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
28. F09F7.2 mlc-3 1.00 11627.91 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
29. F09G8.3 mrps-9 1.00 11627.91 Probable 40S ribosomal protein S9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34388]
30. F10E7.2 F10E7.2 1.00 11627.91
31. F10E7.7 rpl-33 1.00 11627.91 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
32. F13B10.2 rpl-3 1.00 11627.91 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
33. F22D6.2 F22D6.2 1.00 11627.91
34. F25H2.11 tct-1 1.00 11627.91 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
35. F29F11.6 gsp-1 1.00 11627.91 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
36. F32H2.1 snpc-4 1.00 11627.91 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
37. F38A5.13 dnj-11 1.00 11627.91 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
38. F38E1.7 mom-2 1.00 11627.91
39. F39B2.6 rps-26 1.00 11627.91 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
40. F42F12.7 nspc-14 1.00 11627.91 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872249]
41. F46F2.2 kin-20 1.00 11627.91 Casein kinase I isoform delta [Source:UniProtKB/Swiss-Prot;Acc:Q20471]
42. F52D10.3 ftt-2 1.00 11627.91 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
43. F52H3.7 lec-2 1.00 11627.91 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
44. F57B1.4 col-160 1.00 11627.91 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
45. F58G6.9 F58G6.9 1.00 11627.91
46. H06I04.4 ubl-1 1.00 11627.91 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
47. H28O16.1 H28O16.1 1.00 11627.91 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
48. H38K22.2 dcn-1 1.00 11627.91 Defective in cullin neddylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3C8]
49. JC8.3 rpl-12 1.00 11627.91 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
50. K02B2.3 mcu-1 1.00 11627.91 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
51. K02F2.2 ahcy-1 1.00 11627.91 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
52. K04C2.3 K04C2.3 1.00 11627.91
53. K07C5.1 arx-2 1.00 11627.91 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
54. K08D12.3 K08D12.3 1.00 11627.91
55. K11D12.2 pqn-51 1.00 11627.91 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
56. LLC1.3 dld-1 1.00 11627.91 Dihydrolipoyl dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O17953]
57. M01E11.4 pqn-52 1.00 11627.91 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491629]
58. M28.6 lact-3 1.00 11627.91 beta-LACTamase domain containing [Source:RefSeq peptide;Acc:NP_496299]
59. PAR2.3 aak-1 1.00 11627.91 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:P45894]
60. R05F9.9 R05F9.9 1.00 11627.91
61. R10D12.13 R10D12.13 1.00 11627.91
62. R13A5.12 lpd-7 1.00 11627.91 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
63. RIT1M.985 1.00 11627.91
64. T04C12.6 act-1 1.00 11627.91 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
65. T05A1.2 col-122 1.00 11627.91 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
66. T05E11.1 rps-5 1.00 11627.91 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
67. T07A9.9 nog-1 1.00 11627.91 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
68. T09A5.2 klp-3 1.00 11627.91 Kinesin-like protein klp-3 [Source:UniProtKB/Swiss-Prot;Acc:P45962]
69. T09B4.10 chn-1 1.00 11627.91 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
70. T09F3.2 T09F3.2 1.00 11627.91 Carrier protein (C2); Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEG6]
71. T27E9.1 ant-1.1 1.00 11627.91 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
72. W05G11.6 pck-1 1.00 11627.91 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_497134]
73. Y110A2AR.1 Y110A2AR.1 1.00 11627.91 Receptor expression-enhancing protein [Source:RefSeq peptide;Acc:NP_494399]
74. Y40B1B.6 spr-5 1.00 11627.91 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
75. Y47D3A.16 rsks-1 1.00 11627.91 Ribosomal protein S6 kinase [Source:RefSeq peptide;Acc:NP_499447]
76. Y71F9AL.16 arx-1 1.00 11627.91 Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
77. Y73B6BL.32 lsm-8 1.00 11627.91 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
78. ZC404.9 gck-2 1.00 11627.91 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
79. ZC518.3 ccr-4 1.00 11627.91 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
80. ZK652.4 rpl-35 1.00 11627.91 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
81. ZK792.6 let-60 1.00 11627.91 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
82. AC3.5 AC3.5 0.00 0.00 Aminopeptidase-like protein AC3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q17405]
83. AC7.2 soc-2 0.00 0.00 Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]
84. AH10.1 acs-10 0.00 0.00 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_506502]
85. AH6.2 sfxn-1.1 0.00 0.00 Putative sideroflexin-1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09201]
86. AH6.3 AH6.3 0.00 0.00
87. AH9.2 crn-4 0.00 0.00 Cell death-related nuclease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q10905]
88. AH9.3 AH9.3 0.00 0.00
89. B0001.1 lin-24 0.00 0.00
90. B0001.2 B0001.2 0.00 0.00
91. B0001.3 B0001.3 0.00 0.00
92. B0001.4 B0001.4 0.00 0.00 Probable uridine-cytidine kinase [Source:UniProtKB/Swiss-Prot;Acc:Q17413]
93. B0001.5 B0001.5 0.00 0.00
94. B0001.6 eri-12 0.00 0.00 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_502310]
95. B0001.7 B0001.7 0.00 0.00
96. B0001.8 B0001.8 0.00 0.00
97. B0019.2 B0019.2 0.00 0.00
98. B0024.1 col-149 0.00 0.00 COLlagen [Source:RefSeq peptide;Acc:NP_505646]
99. B0024.10 B0024.10 0.00 0.00
100. B0024.11 B0024.11 0.00 0.00 Putative pseudouridine synthase B0024.11 [Source:UniProtKB/Swiss-Prot;Acc:Q17426]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA