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Experiment herm2, region R2.

Sample reads: 67,826. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 882.10 13005.43
2. F11C3.3 unc-54 808.11 11914.45 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
3. T04C12.6 act-1 643.32 9484.93 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. M03F4.2 act-4 594.71 8768.16 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
5. F02A9.3 far-2 559.56 8250.01 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
6. C06A8.3 C06A8.3 549.61 8103.21
7. F07A5.7 unc-15 541.50 7983.75 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
8. T04C12.4 act-3 539.26 7950.64 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
9. W06H8.8 ttn-1 473.46 6980.56 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
10. F52H3.7 lec-2 451.50 6656.72 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
11. T27E9.1 ant-1.1 430.51 6347.27 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
12. F11H8.3 col-8 379.75 5598.84 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
13. F09F7.2 mlc-3 379.06 5588.77 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
14. F57B1.4 col-160 376.62 5552.78 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
15. Y82E9BR.3 Y82E9BR.3 370.57 5463.55 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
16. T05A1.2 col-122 370.28 5459.23 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
17. Y105E8B.1 lev-11 352.31 5194.40 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
18. M18.1 col-129 341.97 5041.84 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
19. C34E10.6 atp-2 334.64 4933.89 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
20. C36E6.3 mlc-1 329.28 4854.73 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
21. R05G6.7 vdac-1 318.54 4696.41 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
22. F28H1.2 cpn-3 315.32 4648.91 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
23. T25F10.6 clik-1 314.93 4643.15 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
24. C24F3.6 col-124 294.13 4336.58 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
25. C18A11.7 dim-1 283.49 4179.70 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
26. C34F6.2 col-178 281.44 4149.48 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
27. K02F2.2 ahcy-1 278.02 4099.10 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
28. F11G11.11 col-20 268.56 3959.63 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
29. Y69A2AR.18 Y69A2AR.18 259.09 3819.88
30. K10B3.9 mai-1 255.08 3760.87 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
31. F01G12.5 let-2 249.03 3671.63 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
32. W03G11.1 col-181 231.65 3415.44 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
33. F08B6.4 unc-87 229.41 3382.33 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
34. F11E6.3 F11E6.3 224.53 3310.37
35. F53A9.10 tnt-2 216.13 3186.59 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
36. F46H5.3 F46H5.3 208.99 3081.23 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
37. Y77E11A.15 col-106 208.07 3067.70 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
38. E04A4.7 cyc-2.1 207.93 3065.69 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
39. RIT6P.22 195.83 2887.22
40. F26F12.1 col-140 191.38 2821.59 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
41. ZK721.2 unc-27 190.95 2815.25 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
42. F47B7.1 F47B7.1 187.63 2766.32 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
43. Y73B6BL.24 acp-6 186.46 2749.05 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
44. F20H11.3 mdh-2 179.92 2652.61 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
45. RIT1P.688 179.43 2645.42
46. C45B2.1 C45B2.1 176.71 2605.40
47. F15A2.1 col-184 174.76 2576.62 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
48. F14F7.1 col-98 172.79 2547.55 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
49. T28D6.3 T28D6.3 172.79 2547.55
50. C49F5.1 sams-1 168.10 2478.46 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
51. R06C7.10 myo-1 167.95 2476.16 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
52. F13D12.4 alh-8 162.44 2394.98 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
53. Y79H2A.1 brp-1 161.21 2376.84 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
54. F31E3.5 eef-1A.1 156.30 2304.45 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
55. F27C1.7 atp-3 150.38 2217.08 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
56. F25H2.5 ndk-1 149.42 2202.98 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
57. T04C12.5 act-2 148.58 2190.60 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
58. F54C1.7 pat-10 148.46 2188.87 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
59. F49E2.5 F49E2.5 147.70 2177.65
60. F52D10.3 ftt-2 146.82 2164.69 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
61. C53B4.5 col-119 146.43 2158.94 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
62. F54E7.2 rps-12 144.97 2137.35 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
63. R10E11.8 vha-1 144.67 2133.03 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
64. C44B12.2 ost-1 144.54 2131.01 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
65. T20B3.2 tni-3 144.52 2130.73 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
66. F38A3.1 col-81 143.54 2116.33 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
67. C36E6.5 mlc-2 142.66 2103.38 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
68. H28O16.1 H28O16.1 140.96 2078.34 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
69. F41F3.4 col-139 140.77 2075.46 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
70. T18D3.4 myo-2 140.57 2072.58 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
71. Y75B12B.2 cyn-7 140.18 2066.82 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
72. T15B7.4 col-142 138.64 2044.08 COLlagen [Source:RefSeq peptide;Acc:NP_504736]
73. F01G4.6 F01G4.6 136.96 2019.32 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
74. C09D1.1 unc-89 136.08 2006.37 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
75. T15B7.3 col-143 130.87 1929.51 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
76. Y66H1B.3 128.18 1889.79
77. F02A9.2 far-1 127.88 1885.47 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
78. Y67H2A.5 Y67H2A.5 126.07 1858.70
79. T21H3.3 cmd-1 125.64 1852.37 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
80. F36A2.6 rps-15 124.66 1837.97 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
81. F33A8.3 cey-1 123.39 1819.26 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
82. F10G2.1 F10G2.1 123.30 1817.82 UPF0376 protein F10G2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q22957]
83. Y49A3A.3 Y49A3A.3 123.30 1817.82
84. C34F6.3 col-179 123.01 1813.65 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
85. Y106G6H.2 pab-1 120.66 1778.96 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
86. T05D4.1 aldo-1 119.20 1757.52 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
87. B0041.4 rpl-4 118.61 1748.74 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
88. W05B2.5 col-93 117.28 1729.16 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
89. C24H10.5 cal-5 117.15 1727.29 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
90. W03G11.1b 117.15 1727.29
91. C12D12.2 glt-1 117.15 1727.15 Excitatory amino acid transporter [Source:UniProtKB/Swiss-Prot;Acc:Q10901]
92. C09G5.5 col-80 116.56 1718.51 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
93. T20G5.2 cts-1 116.25 1713.91 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
94. Y5F2A.1 ttr-16 116.21 1713.33 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
95. T21B10.2 enol-1 113.32 1670.73 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
96. F13B10.2 rpl-3 112.46 1658.06 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
97. F56E10.4 rps-27 111.40 1642.37 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
98. F26E4.6 F26E4.6 110.33 1626.69
99. R07H5.8 R07H5.8 109.41 1613.16
100. R01E6.3 cah-4 108.42 1598.48 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA