C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y57G11C.4

Gene ID Gene Name Reads Transcripts Annotation
Y57G11C.4 vti-1 1086 Y57G11C.4 VTI (Vesicle Transport through t-SNARE Interaction) homolog [Source:RefSeq peptide;Acc:NP_502781]

Genes with expression patterns similar to Y57G11C.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y57G11C.4 vti-1 1086 5 1.000 1.000 1.000 1.000 - - 1.000 - VTI (Vesicle Transport through t-SNARE Interaction) homolog [Source:RefSeq peptide;Acc:NP_502781]
2. F52F12.7 strl-1 8451 4.144 0.956 0.837 0.840 0.837 - - 0.674 - Steroidogenic acute regulatory-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O17883]
3. Y32H12A.4 szy-2 7927 4.074 0.951 0.812 0.844 0.812 - - 0.655 - Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_498147]
4. T04A8.9 dnj-18 10313 3.96 0.952 0.807 0.851 0.807 - - 0.543 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_497962]
5. ZK370.7 ugtp-1 3140 3.93 0.970 0.897 0.887 0.897 - - 0.279 - UDP-galactose translocator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q02334]
6. F40F8.9 lsm-1 5917 3.929 0.950 0.850 0.863 0.850 - - 0.416 - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
7. C18E3.2 swsn-2.2 3460 3.913 0.909 0.892 0.963 0.892 - - 0.257 - SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_491329]
8. C28D4.2 cka-1 7191 3.904 0.954 0.790 0.737 0.790 - - 0.633 - Choline Kinase A [Source:RefSeq peptide;Acc:NP_501732]
9. K08E7.1 eak-7 18960 3.875 0.955 0.859 0.849 0.859 - - 0.353 - Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
10. T12D8.6 mlc-5 19567 3.848 0.955 0.875 0.813 0.875 - - 0.330 - Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
11. M01A10.3 ostd-1 16979 3.842 0.950 0.840 0.851 0.840 - - 0.361 - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P91390]
12. F25D7.1 cup-2 14977 3.829 0.957 0.883 0.830 0.883 - - 0.276 - Derlin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93561]
13. F54C8.5 rheb-1 6358 3.825 0.950 0.847 0.897 0.847 - - 0.284 - GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
14. C38C10.2 slc-17.2 6819 3.811 0.960 0.850 0.832 0.850 - - 0.319 - Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
15. C47E12.3 C47E12.3 6376 3.781 0.958 0.803 0.832 0.803 - - 0.385 - alpha-1,2-Mannosidase [Source:RefSeq peptide;Acc:NP_501802]
16. W01A8.5 tofu-5 5678 3.776 0.953 0.844 0.830 0.844 - - 0.305 - Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
17. C36A4.5 maph-1.3 15493 3.773 0.955 0.788 0.872 0.788 - - 0.370 - Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
18. ZK742.5 lbp-4 2560 3.763 0.961 0.803 0.794 0.803 - - 0.402 - Fatty acid-binding protein homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23092]
19. Y37D8A.10 hpo-21 14222 3.759 0.954 0.820 0.742 0.820 - - 0.423 - Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWW1]
20. T21D12.3 pqbp-1.1 5755 3.757 0.958 0.840 0.895 0.840 - - 0.224 - PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
21. B0252.4 cyn-10 3765 3.749 0.952 0.880 0.857 0.880 - - 0.180 - Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
22. T10C6.4 srx-44 8454 3.732 0.951 0.837 0.896 0.837 - - 0.211 - Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
23. Y59E9AL.7 nbet-1 13073 3.719 0.951 0.850 0.835 0.850 - - 0.233 - Nematode homolog of yeast BET1 (Blocked Early in Transport) [Source:RefSeq peptide;Acc:NP_001023538]
24. Y75B8A.16 Y75B8A.16 1406 3.708 0.953 0.842 0.734 0.842 - - 0.337 -
25. Y56A3A.20 ccf-1 18463 3.705 0.950 0.815 0.841 0.815 - - 0.284 - CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
26. CD4.4 vps-37 4265 3.679 0.955 0.866 0.780 0.866 - - 0.212 - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_504474]
27. Y38A8.2 pbs-3 18117 3.678 0.950 0.817 0.865 0.817 - - 0.229 - Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
28. F16D3.4 tbcd-1 2159 3.675 0.953 0.785 0.816 0.785 - - 0.336 - TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
29. Y73F8A.34 tag-349 7966 3.674 0.955 0.872 0.877 0.872 - - 0.098 -
30. C32E8.3 tppp-1 10716 3.671 0.954 0.799 0.801 0.799 - - 0.318 - Tubulin polymerization-promoting protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P91127]
31. F44E7.2 F44E7.2 12633 3.66 0.958 0.887 0.860 0.887 - - 0.068 -
32. ZC404.3 spe-39 7397 3.637 0.956 0.909 0.888 0.909 - - -0.025 - Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
33. C02B10.2 snpn-1 5519 3.633 0.955 0.814 0.876 0.814 - - 0.174 - SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
34. F39H11.5 pbs-7 13631 3.605 0.954 0.795 0.856 0.795 - - 0.205 - Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
35. F58G11.2 rde-12 6935 3.594 0.966 0.828 0.867 0.828 - - 0.105 - DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
36. T04A8.10 sel-13 3109 3.593 0.951 0.812 0.821 0.812 - - 0.197 - Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
37. T01B7.3 rab-21 2347 3.558 0.973 0.752 0.817 0.752 - - 0.264 - RAB family [Source:RefSeq peptide;Acc:NP_495854]
38. R07E5.11 R07E5.11 1170 3.548 0.951 0.722 0.878 0.722 - - 0.275 -
39. VW02B12L.4 adbp-1 1662 3.54 0.955 0.767 0.848 0.767 - - 0.203 - ADR-2 Binding Protein [Source:RefSeq peptide;Acc:NP_496439]
40. C11D2.7 C11D2.7 1623 3.526 0.954 0.733 0.777 0.733 - - 0.329 -
41. ZK652.3 ufm-1 12647 3.515 0.960 0.810 0.778 0.810 - - 0.157 - Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
42. F34D10.2 evl-18 4675 3.501 0.952 0.898 0.867 0.898 - - -0.114 -
43. F55F10.1 F55F10.1 9760 3.485 0.953 0.673 0.835 0.673 - - 0.351 - Midasin [Source:RefSeq peptide;Acc:NP_500551]
44. Y97E10AR.7 lmtr-2 4032 3.482 0.957 0.695 0.818 0.695 - - 0.317 - Ragulator complex protein LAMTOR2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N2U6]
45. F54C9.10 arl-1 6354 3.429 0.956 0.857 0.807 0.857 - - -0.048 - ADP-ribosylation factor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20758]
46. C14B9.4 plk-1 18785 3.422 0.957 0.855 0.873 0.855 - - -0.118 - Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
47. T03F1.1 uba-5 11792 3.413 0.964 0.876 0.855 0.876 - - -0.158 - Ubiquitin-like modifier-activating enzyme 5 [Source:UniProtKB/Swiss-Prot;Acc:P91430]
48. Y39A1C.4 hex-3 1669 3.383 0.956 0.761 0.905 0.761 - - - - HEXosaminidase [Source:RefSeq peptide;Acc:NP_499390]
49. B0361.10 ykt-6 8571 3.382 0.950 0.798 0.805 0.798 - - 0.031 - YKT6 (yeast v-SNARE) homolog [Source:RefSeq peptide;Acc:NP_498605]
50. M03D4.1 zen-4 8185 3.368 0.956 0.832 0.855 0.832 - - -0.107 - Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
51. ZC308.1 gld-2 9622 3.36 0.875 0.780 0.952 0.780 - - -0.027 - Poly(A) RNA polymerase gld-2 [Source:UniProtKB/Swiss-Prot;Acc:O17087]
52. ZK652.11 cuc-1 4819 3.318 0.951 0.606 0.578 0.606 - - 0.577 - CU (copper) Chaperonin [Source:RefSeq peptide;Acc:NP_498707]
53. F30A10.6 sac-1 4596 3.309 0.952 0.826 0.810 0.826 - - -0.105 - SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
54. F44E7.5 F44E7.5 1980 3.304 0.957 0.761 0.867 0.761 - - -0.042 -
55. C07E3.6 ceh-58 490 3.299 0.574 0.955 0.815 0.955 - - - - C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_496234]
56. F57B10.8 F57B10.8 3518 3.263 0.952 0.684 0.775 0.684 - - 0.168 -
57. F41C3.5 F41C3.5 11126 3.184 0.955 0.632 0.848 0.632 - - 0.117 - Uncharacterized serine carboxypeptidase F41C3.5 [Source:UniProtKB/Swiss-Prot;Acc:P52717]
58. C38C10.4 gpr-2 1118 3.173 0.827 0.814 0.954 0.814 - - -0.236 - G-protein regulator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q03569]
59. W09C3.7 W09C3.7 3362 2.99 0.950 0.455 0.830 0.455 - - 0.300 -
60. F27E5.1 F27E5.1 2005 2.751 0.954 0.260 0.844 0.260 - - 0.433 -
61. F42H10.3 F42H10.3 3052 2.664 0.964 0.319 0.776 0.319 - - 0.286 - LIM and SH3 domain protein F42H10.3 [Source:UniProtKB/Swiss-Prot;Acc:P34416]
62. Y74C10AR.2 Y74C10AR.2 13677 2.359 0.965 - 0.804 - - - 0.590 -
63. F32H5.1 F32H5.1 2194 2.29 0.953 0.144 0.869 0.144 - - 0.180 -
64. T23G11.10 T23G11.10 0 2.265 0.953 - 0.826 - - - 0.486 -
65. T25B2.1 T25B2.1 0 2.209 0.953 - 0.851 - - - 0.405 -
66. Y106G6H.9 Y106G6H.9 0 2.197 0.950 - 0.828 - - - 0.419 -
67. F36D3.14 F36D3.14 0 2.145 0.956 - 0.880 - - - 0.309 -
68. F01G12.1 F01G12.1 0 2.106 0.952 - 0.727 - - - 0.427 -
69. Y59A8B.19 Y59A8B.19 0 2.081 0.962 - 0.853 - - - 0.266 -
70. F42A9.9 F42A9.9 0 2.042 0.967 - 0.853 - - - 0.222 -
71. R155.3 R155.3 228 2.03 0.961 - 0.715 - - - 0.354 - Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_497485]
72. C49C8.1 C49C8.1 569 1.992 0.961 - 0.836 - - - 0.195 -
73. F45C12.9 F45C12.9 0 1.99 0.950 - 0.756 - - - 0.284 -
74. ZK688.12 ZK688.12 682 1.976 0.954 - 0.811 - - - 0.211 -
75. F29B9.7 F29B9.7 0 1.963 0.952 - 0.827 - - - 0.184 -
76. C35D10.12 C35D10.12 0 1.956 0.953 - 0.786 - - - 0.217 -
77. Y53F4B.5 Y53F4B.5 0 1.947 0.954 - 0.855 - - - 0.138 -
78. Y54E2A.12 tbc-20 3126 1.912 0.955 - 0.910 - - - 0.047 - TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_497068]
79. F54D12.10 F54D12.10 0 1.885 0.962 - 0.825 - - - 0.098 -

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA