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Results for Y48C3A.14

Gene ID Gene Name Reads Transcripts Annotation
Y48C3A.14 Y48C3A.14 1228 Y48C3A.14a, Y48C3A.14b, Y48C3A.14c, Y48C3A.14d DNA topoisomerase [Source:RefSeq peptide;Acc:NP_001254382]

Genes with expression patterns similar to Y48C3A.14

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48C3A.14 Y48C3A.14 1228 2 - 1.000 - 1.000 - - - - DNA topoisomerase [Source:RefSeq peptide;Acc:NP_001254382]
2. Y59A8B.8 Y59A8B.8 4781 1.928 - 0.964 - 0.964 - - - -
3. F08F8.3 kap-1 31437 1.922 - 0.961 - 0.961 - - - - Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
4. C56E6.3 toe-2 1945 1.92 - 0.960 - 0.960 - - - - Target Of ERK kinase MPK-1 [Source:RefSeq peptide;Acc:NP_001022042]
5. F28H1.3 aars-2 13537 1.918 - 0.959 - 0.959 - - - - Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
6. Y113G7B.24 sld-5 3037 1.916 - 0.958 - 0.958 - - - - DNA replication complex GINS protein SLD5 [Source:RefSeq peptide;Acc:NP_001256903]
7. E04D5.1 E04D5.1 17275 1.914 - 0.957 - 0.957 - - - - Eukaryotic translation initiation factor 2A [Source:UniProtKB/Swiss-Prot;Acc:Q19052]
8. Y71F9AM.4 cogc-3 2678 1.914 - 0.957 - 0.957 - - - - Conserved Oligomeric Golgi (COG) Component [Source:RefSeq peptide;Acc:NP_001021806]
9. T11G6.8 T11G6.8 8417 1.912 - 0.956 - 0.956 - - - -
10. T06D8.8 rpn-9 11282 1.912 - 0.956 - 0.956 - - - - proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
11. R12E2.3 rpn-8 11194 1.912 - 0.956 - 0.956 - - - - proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
12. B0286.4 ntl-2 14207 1.91 - 0.955 - 0.955 - - - - NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
13. ZK652.10 tag-307 3741 1.908 - 0.954 - 0.954 - - - -
14. C47D12.6 tars-1 23488 1.908 - 0.954 - 0.954 - - - - Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
15. F40G9.3 ubc-20 16785 1.908 - 0.954 - 0.954 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
16. Y87G2A.10 vps-28 3403 1.908 - 0.954 - 0.954 - - - - Vacuolar protein sorting-associated protein 28 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NA26]
17. T12F5.3 glh-4 3381 1.908 - 0.954 - 0.954 - - - - ATP-dependent RNA helicase glh-4 [Source:UniProtKB/Swiss-Prot;Acc:O76743]
18. F52A8.6 F52A8.6 5345 1.908 - 0.954 - 0.954 - - - - NF-kappa-B inhibitor-interacting Ras-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q19143]
19. R05D11.5 R05D11.5 2074 1.906 - 0.953 - 0.953 - - - -
20. R05D11.7 snrp-27 4159 1.906 - 0.953 - 0.953 - - - - Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
21. Y39A1A.13 orc-4 986 1.906 - 0.953 - 0.953 - - - - ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_499348]
22. C28C12.12 C28C12.12 5704 1.906 - 0.953 - 0.953 - - - -
23. T12D8.6 mlc-5 19567 1.904 - 0.952 - 0.952 - - - - Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
24. T19A6.1 T19A6.1 4352 1.904 - 0.952 - 0.952 - - - -
25. Y54G2A.2 atln-1 16823 1.904 - 0.952 - 0.952 - - - - ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
26. H38K22.2 dcn-1 9678 1.904 - 0.952 - 0.952 - - - - Defective in cullin neddylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3C8]
27. W02D3.2 dhod-1 3816 1.904 - 0.952 - 0.952 - - - - Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:RefSeq peptide;Acc:NP_491930]
28. Y119D3B.15 dss-1 19116 1.904 - 0.952 - 0.952 - - - - Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
29. T06D8.6 cchl-1 26292 1.904 - 0.952 - 0.952 - - - - Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
30. Y102A5A.1 cand-1 11808 1.904 - 0.952 - 0.952 - - - - Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
31. C42C1.5 tag-335 4129 1.902 - 0.951 - 0.951 - - - - Mannose-1-phosphate guanyltransferase beta [Source:UniProtKB/Swiss-Prot;Acc:A3QMC8]
32. F11A10.6 F11A10.6 8364 1.902 - 0.951 - 0.951 - - - -
33. B0205.3 rpn-10 16966 1.902 - 0.951 - 0.951 - - - - proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
34. F38A1.8 F38A1.8 5808 1.902 - 0.951 - 0.951 - - - -
35. C52E12.4 lst-6 5520 1.902 - 0.951 - 0.951 - - - - Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_495437]
36. Y48A6B.13 spat-2 21773 1.902 - 0.951 - 0.951 - - - - Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
37. Y54E10BR.5 Y54E10BR.5 10734 1.902 - 0.951 - 0.951 - - - - Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]
38. F53F4.3 tbcb-1 6442 1.902 - 0.951 - 0.951 - - - - Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
39. F20G4.1 smgl-1 1768 1.9 - 0.950 - 0.950 - - - -
40. B0348.6 ife-3 26859 1.9 - 0.950 - 0.950 - - - - Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
41. M01E5.3 M01E5.3 17209 1.9 - 0.950 - 0.950 - - - -
42. C04G2.6 dis-3 5048 1.9 - 0.950 - 0.950 - - - - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
43. F39B2.10 dnj-12 35162 1.9 - 0.950 - 0.950 - - - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
44. F21D5.7 F21D5.7 9753 1.9 - 0.950 - 0.950 - - - -
45. F48E8.5 paa-1 39773 1.9 - 0.950 - 0.950 - - - - Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA