C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male4, section s2.

Sample reads: 144. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T27E9.1 ant-1.1 3.01 20901.33 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
2. B0393.4 B0393.4 2.00 13887.92
3. F09F7.2 mlc-3 2.00 13887.92 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
4. F11C3.3 unc-54 2.00 13887.92 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
5. F13G3.4 dylt-1 2.00 13887.92 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
6. F54C1.7 pat-10 2.00 13887.92 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
7. R05G6.7 vdac-1 2.00 13887.92 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
8. Y49A3A.3 Y49A3A.3 2.00 13887.92
9. Y71F9AL.13 rpl-1 2.00 13887.92 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
10. B0041.4 rpl-4 1.00 6943.96 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
11. B0213.2 nlp-27 1.00 6943.96 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
12. C01H6.5 nhr-23 1.00 6943.96 Nuclear hormone receptor family member nhr-23 [Source:UniProtKB/Swiss-Prot;Acc:P41828]
13. C06A8.3 C06A8.3 1.00 6943.96
14. C06E7.3 sams-4 1.00 6943.96 Probable S-adenosylmethionine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:P50306]
15. C09G4.2 pkg-2 1.00 6943.96 Protein Kinase, cGMP-dependent [Source:RefSeq peptide;Acc:NP_741469]
16. C14F5.1 dct-1 1.00 6943.96 NIP3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09969]
17. C15B12.7 cdf-1 1.00 6943.96 Cation diffusion facilitator family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95QW4]
18. C16A11.3 C16A11.3 1.00 6943.96
19. C16C10.11 har-1 1.00 6943.96 Hemiasterlin resistant protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09254]
20. C16C10.7 rnf-5 1.00 6943.96 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
21. C17H12.14 vha-8 1.00 6943.96 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
22. C18A11.7 dim-1 1.00 6943.96 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
23. C18A3.5 tiar-1 1.00 6943.96 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
24. C18F10.7 C18F10.7 1.00 6943.96
25. C25H3.8 C25H3.8 1.00 6943.96
26. C39F7.4 rab-1 1.00 6943.96 RAB family [Source:RefSeq peptide;Acc:NP_503397]
27. C44B12.3 C44B12.3 1.00 6943.96
28. C47E12.5 uba-1 1.00 6943.96 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
29. C47E8.11 C47E8.11 1.00 6943.96
30. C52E12.1 C52E12.1 1.00 6943.96
31. C53B4.5 col-119 1.00 6943.96 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
32. C55B7.4 acdh-1 1.00 6943.96 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
33. C56C10.3 vps-32.1 1.00 6943.96 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
34. D2013.7 eif-3.F 1.00 6943.96 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
35. E03H12.10 ssp-9 1.00 6943.96 Sperm-specific class P protein 9/11 [Source:UniProtKB/Swiss-Prot;Acc:Q23058]
36. E04A4.7 cyc-2.1 1.00 6943.96 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
37. F01G12.5 let-2 1.00 6943.96 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
38. F07A5.7 unc-15 1.00 6943.96 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
39. F08F1.3 F08F1.3 1.00 6943.96
40. F08H9.2 F08H9.2 1.00 6943.96
41. F09E5.15 prdx-2 1.00 6943.96 PeRoxireDoXin [Source:RefSeq peptide;Acc:NP_872052]
42. F13B10.2 rpl-3 1.00 6943.96 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
43. F15B10.1 nstp-2 1.00 6943.96 Nucleotide Sugar TransPorter family [Source:RefSeq peptide;Acc:NP_001040936]
44. F15C11.2 ubql-1 1.00 6943.96 UBiQuiLin [Source:RefSeq peptide;Acc:NP_740884]
45. F15E11.1 pud-2.1 1.00 6943.96 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503640]
46. F17C11.11 F17C11.11 1.00 6943.96
47. F18E2.3 scc-3 1.00 6943.96 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
48. F18E3.12 F18E3.12 1.00 6943.96
49. F19B2.5 F19B2.5 1.00 6943.96
50. F20G2.4 nas-24 1.00 6943.96 Zinc metalloproteinase nas-24 [Source:UniProtKB/Swiss-Prot;Acc:Q93542]
51. F22D6.6 ekl-1 1.00 6943.96
52. F25B5.6 F25B5.6 1.00 6943.96 Putative folylpolyglutamate synthase [Source:UniProtKB/Swiss-Prot;Acc:Q09509]
53. F27C1.7 atp-3 1.00 6943.96 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
54. F28H1.2 cpn-3 1.00 6943.96 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
55. F29B9.8 F29B9.8 1.00 6943.96
56. F36A4.7 ama-1 1.00 6943.96 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
57. F37C12.11 rps-21 1.00 6943.96 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
58. F41H10.11 sand-1 1.00 6943.96 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
59. F42C5.8 rps-8 1.00 6943.96 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
60. F42G4.3 zyx-1 1.00 6943.96 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
61. F47B7.1 F47B7.1 1.00 6943.96 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
62. F49F1.9 F49F1.9 1.00 6943.96 Galectin [Source:RefSeq peptide;Acc:NP_500490]
63. F52D10.3 ftt-2 1.00 6943.96 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
64. F52E1.14 F52E1.14 1.00 6943.96
65. F52G3.1 F52G3.1 1.00 6943.96
66. F53G12.10 rpl-7 1.00 6943.96 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
67. F53G2.7 mnat-1 1.00 6943.96 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
68. F54D5.8 dnj-13 1.00 6943.96 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_496468]
69. F54E7.2 rps-12 1.00 6943.96 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
70. F55D10.2 rpl-25.1 1.00 6943.96 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
71. F59B2.12 F59B2.12 1.00 6943.96
72. H27C11.1 nhr-97 1.00 6943.96 Nuclear hormone receptor family member nhr-97 [Source:UniProtKB/Swiss-Prot;Acc:Q9BJK5]
73. K01C8.9 nst-1 1.00 6943.96 Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
74. K02A4.1 bcat-1 1.00 6943.96 Branched-chain-amino-acid aminotransferase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P54688]
75. K03E6.5 unc-1 1.00 6943.96 Stomatin-like protein UNC-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED08]
76. K04F10.3 K04F10.3 1.00 6943.96 Endoplasmic reticulum-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:O44769]
77. K07F5.1 msp-81 1.00 6943.96 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
78. K07F5.11 ssq-1 1.00 6943.96 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_501768]
79. K09D9.2 cyp-35A3 1.00 6943.96 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_504121]
80. K11G12.1 nas-11 1.00 6943.96 Zinc metalloproteinase nas-11 [Source:UniProtKB/Swiss-Prot;Acc:Q21432]
81. M03F4.2 act-4 1.00 6943.96 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
82. R01B10.5 jamp-1 1.00 6943.96 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
83. R01E6.3 cah-4 1.00 6943.96 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
84. R05F9.12 aagr-2 1.00 6943.96 Acid Alpha Glucosidase Relate [Source:RefSeq peptide;Acc:NP_494897]
85. R07E4.6 kin-2 1.00 6943.96 cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
86. R10E11.8 vha-1 1.00 6943.96 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
87. R11A5.4 pck-2 1.00 6943.96 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
88. R13A1.3 R13A1.3 1.00 6943.96
89. R13A5.8 rpl-9 1.00 6943.96 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
90. R13H9.2 msp-57 1.00 6943.96 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
91. R151.3 rpl-6 1.00 6943.96 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
92. R166.5 mnk-1 1.00 6943.96 MAP kinase iNtegrating Kinase (MNK) homolog [Source:RefSeq peptide;Acc:NP_496272]
93. RIT1P.48 1.00 6943.96
94. T01H8.1 rskn-1 1.00 6943.96 Putative ribosomal protein S6 kinase alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21734]
95. T04C12.6 act-1 1.00 6943.96 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
96. T05H4.13 alh-4 1.00 6943.96 Aldehyde dehydrogenase [Source:RefSeq peptide;Acc:NP_741553]
97. T09A5.2 klp-3 1.00 6943.96 Kinesin-like protein klp-3 [Source:UniProtKB/Swiss-Prot;Acc:P45962]
98. T09B4.1 pigv-1 1.00 6943.96 GPI mannosyltransferase pigv-1 [Source:UniProtKB/Swiss-Prot;Acc:O02164]
99. T19D2.2 T19D2.2 1.00 6943.96 Putative prenylated protein tyrosine phosphatase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG43]
100. T21B10.2 enol-1 1.00 6943.96 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA