C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male2, section s34.

Sample reads: 13,571. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. Y39B6A.1 Y39B6A.1 297.00 21884.71
2. F07A5.7 unc-15 128.00 9431.79 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
3. T27E9.1 ant-1.1 115.00 8473.88 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
4. RIT6P.22 109.00 8031.76
5. T15B7.3 col-143 106.00 7810.70 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
6. C06A8.3 C06A8.3 105.00 7737.02
7. T04C12.6 act-1 95.70 7051.74 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
8. F57B1.4 col-160 94.30 6948.58 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
9. W06H8.8 ttn-1 94.30 6948.58 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
10. F28H1.2 cpn-3 88.60 6528.57 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
11. Y82E9BR.3 Y82E9BR.3 83.00 6115.93 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
12. ZK721.2 unc-27 77.50 5710.66 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
13. Y47D7A.11 Y47D7A.11 76.20 5614.86
14. C34E10.6 atp-2 74.80 5511.70 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
15. F11C3.3 unc-54 73.50 5415.91 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
16. Y105E8B.1 lev-11 63.10 4649.58 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
17. Y47D7A.7 Y47D7A.7 60.50 4458.00
18. F52H3.7 lec-2 56.80 4185.36 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
19. T04C12.4 act-3 56.80 4185.36 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
20. K08D12.6 K08D12.6 53.00 3905.35
21. C34F6.2 col-178 51.80 3816.93 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
22. C36E6.3 mlc-1 49.40 3640.08 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
23. C17F4.7 C17F4.7 48.20 3551.66
24. F11H8.3 col-8 48.20 3551.66 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
25. F26F12.1 col-140 48.20 3551.66 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
26. K02F2.2 ahcy-1 48.20 3551.66 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
27. T05A1.2 col-122 48.20 3551.66 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
28. T09F5.9 clec-47 47.00 3463.24 C-type LECtin [Source:RefSeq peptide;Acc:NP_506744]
29. F11G11.11 col-20 45.80 3374.81 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
30. F52D10.3 ftt-2 45.80 3374.81 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
31. F56H9.2 F56H9.2 45.80 3374.81
32. Y77E11A.15 col-106 45.80 3374.81 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
33. T25F10.6 clik-1 43.40 3197.97 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
34. C09G5.5 col-80 41.00 3021.12 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
35. ZK1193.1 col-19 41.00 3021.12 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
36. C16H3.2 lec-9 39.90 2940.07 Galectin [Source:RefSeq peptide;Acc:NP_510844]
37. F14F7.1 col-98 39.90 2940.07 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
38. M03F4.2 act-4 39.90 2940.07 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
39. Y38H6C.1 dct-16 39.90 2940.07 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
40. Y69A2AR.18 Y69A2AR.18 39.90 2940.07
41. C55B7.4 acdh-1 38.70 2851.64 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
42. E04A4.7 cyc-2.1 38.70 2851.64 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
43. F53A9.10 tnt-2 38.70 2851.64 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
44. Y119D3B.21 Y119D3B.21 38.70 2851.64
45. C09D1.1 unc-89 36.40 2682.17 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
46. C36E6.5 mlc-2 36.40 2682.17 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
47. C53B4.5 col-119 36.40 2682.17 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
48. W05B2.5 col-93 36.40 2682.17 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
49. F49E2.5 F49E2.5 35.30 2601.11
50. F02A9.2 far-1 31.80 2343.21 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
51. W03G11.1 col-181 31.80 2343.21 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
52. Y67H2A.8 fat-1 31.80 2343.21 Omega-3 fatty acid desaturase fat-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEQ0]
53. F31E3.5 eef-1A.1 30.70 2262.16 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
54. F39B2.6 rps-26 30.70 2262.16 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
55. C24F3.6 col-124 29.60 2181.10 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
56. F09F7.2 mlc-3 29.60 2181.10 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
57. F15A2.1 col-184 29.60 2181.10 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
58. F25H2.5 ndk-1 29.60 2181.10 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
59. F56B3.1 col-103 29.60 2181.10 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
60. R05G6.7 vdac-1 29.60 2181.10 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
61. R10E11.8 vha-1 29.60 2181.10 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
62. B0213.2 nlp-27 28.50 2100.05 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
63. F26E4.6 F26E4.6 28.50 2100.05
64. H28O16.1 H28O16.1 28.50 2100.05 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
65. ZK622.3 pmt-1 28.50 2100.05 Phosphoethanolamine MethylTransferase [Source:RefSeq peptide;Acc:NP_494990]
66. C34F6.3 col-179 27.40 2018.99 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
67. F47B7.1 F47B7.1 27.40 2018.99 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
68. T21H3.3 cmd-1 27.40 2018.99 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
69. C42C1.14 rpl-34 26.30 1937.94 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
70. F01G12.5 let-2 26.30 1937.94 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
71. F37C12.4 rpl-36 26.30 1937.94 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
72. F54C9.5 rpl-5 26.30 1937.94 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
73. F56E10.4 rps-27 26.30 1937.94 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
74. K10B3.9 mai-1 26.30 1937.94 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
75. K11D9.2 sca-1 26.30 1937.94 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
76. T20G5.2 cts-1 26.30 1937.94 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
77. T21B10.2 enol-1 26.30 1937.94 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
78. W02A2.1 fat-2 26.30 1937.94 Delta(12) fatty acid desaturase fat-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EGA5]
79. F01G4.6 F01G4.6 25.20 1856.88 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
80. F02A9.3 far-2 25.20 1856.88 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
81. F08B6.4 unc-87 25.20 1856.88 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
82. F54E7.2 rps-12 25.20 1856.88 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
83. R02F2.1 R02F2.1 24.00 1768.46
84. R13A5.8 rpl-9 24.00 1768.46 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
85. T04C12.5 act-2 24.00 1768.46 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
86. T25C8.2 act-5 24.00 1768.46 ACTin [Source:RefSeq peptide;Acc:NP_499809]
87. W09C5.6 rpl-31 24.00 1768.46 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
88. Y24D9A.4 rpl-7A 24.00 1768.46 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
89. Y71H2AM.5 Y71H2AM.5 24.00 1768.46
90. Y75B12B.2 cyn-7 24.00 1768.46 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
91. C49F5.1 sams-1 23.00 1694.78 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
92. F13B10.2 rpl-3 23.00 1694.78 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
93. F25A2.1 F25A2.1 23.00 1694.78
94. F37C12.9 rps-14 23.00 1694.78 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
95. F54C1.7 pat-10 23.00 1694.78 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
96. K02B2.5 rps-25 23.00 1694.78 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
97. K09F5.3 spp-14 23.00 1694.78 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
98. R53.4 R53.4 23.00 1694.78 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
99. RIT2P.88 23.00 1694.78
100. Y47D7A.2 Y47D7A.2 23.00 1694.78
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA