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Experiment male2, section s30.

Sample reads: 247,685. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 1420.00 5733.13 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. C53B4.5 col-119 1240.00 5006.39 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
3. K08D12.6 K08D12.6 1240.00 5006.39
4. T04C12.4 act-3 1240.00 5006.39 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
5. F54D12.9 F54D12.9 1140.00 4602.65
6. F25E5.7 F25E5.7 1060.00 4279.66
7. Y105E8B.1 lev-11 1060.00 4279.66 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
8. F02A9.2 far-1 1010.00 4077.79 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
9. F11G11.11 col-20 959.00 3871.88 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
10. R03H10.5 R03H10.5 959.00 3871.88
11. F11C3.3 unc-54 920.00 3714.42 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
12. F26F12.1 col-140 920.00 3714.42 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
13. M03F4.2 act-4 920.00 3714.42 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
14. T27E9.1 ant-1.1 920.00 3714.42 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
15. C24F3.6 col-124 885.00 3573.11 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
16. C34F6.2 col-178 885.00 3573.11 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
17. K02F2.2 ahcy-1 885.00 3573.11 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
18. F02A9.3 far-2 855.00 3451.99 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
19. T28D6.2 tba-7 855.00 3451.99 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_499463]
20. Y39B6A.1 Y39B6A.1 855.00 3451.99
21. F34D6.7 F34D6.7 828.00 3342.98
22. Y39B6A.20 asp-1 804.00 3246.08 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
23. F20G2.4 nas-24 782.00 3157.26 Zinc metalloproteinase nas-24 [Source:UniProtKB/Swiss-Prot;Acc:Q93542]
24. F34D6.9 F34D6.9 782.00 3157.26
25. ZK1193.1 col-19 782.00 3157.26 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
26. C06E2.9 C06E2.9 761.00 3072.47
27. F25A2.1 F25A2.1 743.00 2999.80
28. M176.10 M176.10 743.00 2999.80
29. Y82E9BR.3 Y82E9BR.3 743.00 2999.80 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
30. F07A5.7 unc-15 725.00 2927.13 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
31. F34D6.8 F34D6.8 725.00 2927.13
32. C35E7.7 C35E7.7 708.00 2858.49
33. F26D2.16 F26D2.16 708.00 2858.49
34. F21F8.7 asp-6 693.00 2797.93 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
35. K10B3.9 mai-1 693.00 2797.93 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
36. Y18D10A.2 Y18D10A.2 678.00 2737.37
37. Y38A10A.5 crt-1 664.00 2680.84 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
38. T04C12.5 act-2 651.00 2628.36 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
39. F54C1.7 pat-10 639.00 2579.91 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
40. F11H8.3 col-8 616.00 2487.05 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
41. F09F7.2 mlc-3 605.00 2442.64 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
42. C15H9.6 hsp-3 594.00 2398.22 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
43. C34F6.3 col-179 594.00 2398.22 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
44. F35C5.6 clec-63 594.00 2398.22 C-type LECtin [Source:RefSeq peptide;Acc:NP_496743]
45. T26A8.3 T26A8.3 594.00 2398.22
46. F44C4.3 cpr-4 565.00 2281.14 Cathepsin B-like cysteine proteinase 4 [Source:UniProtKB/Swiss-Prot;Acc:P43508]
47. T25F10.6 clik-1 548.00 2212.50 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
48. C36E6.3 mlc-1 539.00 2176.17 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
49. E04A4.7 cyc-2.1 539.00 2176.17 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
50. F21F8.3 asp-5 539.00 2176.17 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505135]
51. C05B5.11 C05B5.11 516.00 2083.31
52. RIT1P.688 516.00 2083.31
53. F42C5.8 rps-8 494.00 1994.48 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
54. F31E3.5 eef-1A.1 487.00 1966.22 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
55. R10E11.8 vha-1 481.00 1942.00 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
56. T05A1.2 col-122 481.00 1942.00 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
57. Y71F9AL.13 rpl-1 481.00 1942.00 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
58. B0041.4 rpl-4 468.00 1889.51 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
59. C34E10.6 atp-2 468.00 1889.51 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
60. F08B6.4 unc-87 468.00 1889.51 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
61. F54E7.2 rps-12 462.00 1865.29 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
62. F01G4.6 F01G4.6 456.00 1841.06 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
63. F25H2.5 ndk-1 456.00 1841.06 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
64. F43C11.2 F43C11.2 456.00 1841.06
65. C04F12.4 rpl-14 450.00 1816.84 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
66. C17F4.7 C17F4.7 450.00 1816.84
67. C42C1.14 rpl-34 450.00 1816.84 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
68. K09F5.3 spp-14 450.00 1816.84 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
69. R05G6.7 vdac-1 444.00 1792.61 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
70. W02D7.12 W02D7.12 444.00 1792.61
71. F40F11.1 rps-11 433.00 1748.20 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
72. H28O16.1 H28O16.1 433.00 1748.20 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
73. RIT3M.794 433.00 1748.20
74. H06O01.1 pdi-3 428.00 1728.01
75. C06B8.8 rpl-38 422.00 1703.79 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
76. F07D10.1 rpl-11.2 412.00 1663.41 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
77. F13B10.2 rpl-3 407.00 1643.23 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
78. W09C5.6 rpl-31 402.00 1623.04 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
79. T27E4.8 hsp-16.1 398.00 1606.89 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
80. F57B1.4 col-160 393.00 1586.70 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
81. K02B2.5 rps-25 393.00 1586.70 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
82. R11A5.4 pck-2 393.00 1586.70 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
83. C07A12.4 pdi-2 384.00 1550.37 Protein disulfide-isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17770]
84. F33E2.7 F33E2.7 384.00 1550.37
85. RIT4P.833 384.00 1550.37
86. W03G11.1 col-181 379.00 1530.18 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
87. Y25C1A.2 Y25C1A.2 379.00 1530.18
88. T03E6.7 cpl-1 375.00 1514.03 CathePsin L family [Source:RefSeq peptide;Acc:NP_001256718]
89. F14F7.1 col-98 371.00 1497.88 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
90. F53A9.10 tnt-2 371.00 1497.88 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
91. T09F5.9 clec-47 371.00 1497.88 C-type LECtin [Source:RefSeq peptide;Acc:NP_506744]
92. ZK721.2 unc-27 371.00 1497.88 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
93. F10E7.7 rpl-33 366.00 1477.69 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
94. T07C4.5 ttr-15 366.00 1477.69 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
95. Y94H6A.10 Y94H6A.10 366.00 1477.69
96. C06A8.3 C06A8.3 362.00 1461.54
97. F57F5.1 F57F5.1 358.00 1445.39
98. D1007.6 rps-10 354.00 1429.24 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
99. F36A2.6 rps-15 354.00 1429.24 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
100. F56E10.4 rps-27 354.00 1429.24 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA