C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male2, section s18.

Sample reads: 35,891. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F11G11.11 col-20 362.00 10086.82 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
2. F11H8.3 col-8 354.00 9863.91 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
3. F26F12.1 col-140 324.00 9027.98 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
4. K08D12.6 K08D12.6 291.00 8108.47
5. T27E9.1 ant-1.1 253.00 7049.63 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
6. F57B1.4 col-160 251.00 6993.90 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
7. K02F2.2 ahcy-1 248.00 6910.31 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
8. T05A1.2 col-122 248.00 6910.31 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
9. C34F6.2 col-178 235.00 6548.07 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
10. C24F3.6 col-124 230.00 6408.75 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
11. C34E10.6 atp-2 228.00 6353.02 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
12. C53B4.5 col-119 223.00 6213.70 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
13. ZK1193.1 col-19 209.00 5823.61 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
14. Y82E9BR.3 Y82E9BR.3 202.00 5628.56 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
15. W03G11.1 col-181 187.00 5210.59 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
16. C34F6.3 col-179 173.00 4820.50 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
17. T04C12.6 act-1 167.00 4653.31 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
18. T15B7.3 col-143 165.00 4597.58 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
19. RIT1P.688 158.00 4402.53
20. Y77E11A.15 col-106 149.00 4151.76 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
21. F02A9.3 far-2 147.00 4096.03 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
22. C06A8.3 C06A8.3 145.00 4040.30
23. F14F7.1 col-98 140.00 3900.98 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
24. R10E11.8 vha-1 127.00 3538.75 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
25. H28O16.1 H28O16.1 123.00 3427.29 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
26. ZK721.2 unc-27 122.00 3399.43 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
27. F02A9.2 far-1 120.00 3343.70 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
28. F11C7.5 osm-11 120.00 3343.70
29. E04A4.7 cyc-2.1 115.00 3204.38 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
30. K10B3.9 mai-1 114.00 3176.51 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
31. F15A2.1 col-184 112.00 3120.78 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
32. F44C4.3 cpr-4 109.00 3037.19 Cathepsin B-like cysteine proteinase 4 [Source:UniProtKB/Swiss-Prot;Acc:P43508]
33. C09G5.5 col-80 108.00 3009.33 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
34. F37C12.9 rps-14 105.00 2925.73 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
35. RIT6P.22 102.00 2842.14
36. Y39B6A.20 asp-1 102.00 2842.14 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
37. F07A5.7 unc-15 100.00 2786.41 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
38. F11C3.3 unc-54 98.60 2747.40 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
39. Y49A3A.3 Y49A3A.3 94.30 2627.59
40. F54E7.2 rps-12 92.80 2585.79 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
41. F56B3.1 col-103 92.80 2585.79 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
42. K02B2.5 rps-25 92.80 2585.79 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
43. Y38H6C.1 dct-16 92.80 2585.79 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
44. C49F5.1 sams-1 91.40 2546.78 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
45. T04C12.4 act-3 91.40 2546.78 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
46. F36A2.6 rps-15 90.00 2507.77 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
47. M18.1 col-129 90.00 2507.77 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
48. R05G6.7 vdac-1 90.00 2507.77 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
49. Y19D10A.9 clec-209 90.00 2507.77 C-type LECtin [Source:RefSeq peptide;Acc:NP_503650]
50. T25C8.2 act-5 88.60 2468.76 ACTin [Source:RefSeq peptide;Acc:NP_499809]
51. W07B8.5 cpr-5 88.60 2468.76 Cathepsin B-like cysteine proteinase 5 [Source:UniProtKB/Swiss-Prot;Acc:P43509]
52. C04F12.4 rpl-14 87.20 2429.75 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
53. F21F8.7 asp-6 87.20 2429.75 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
54. Y105E8B.1 lev-11 84.40 2351.73 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
55. B0041.4 rpl-4 81.60 2273.71 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
56. F56H9.2 F56H9.2 80.20 2234.70
57. Y71F9AL.13 rpl-1 80.20 2234.70 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
58. Y24D9A.4 rpl-7A 78.90 2198.48 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
59. B0513.3 rpl-29 77.50 2159.47 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
60. F28D1.7 rps-23 77.50 2159.47 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
61. F39B2.6 rps-26 77.50 2159.47 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
62. F42C5.8 rps-8 76.20 2123.25 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
63. W05B2.5 col-93 76.20 2123.25 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
64. Y71A12B.1 rps-6 74.80 2084.24 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
65. Y75B12B.2 cyn-7 74.80 2084.24 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
66. F41F3.4 col-139 73.50 2048.01 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
67. F01G4.6 F01G4.6 72.20 2011.79 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
68. F37C12.4 rpl-36 72.20 2011.79 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
69. F56E10.4 rps-27 72.20 2011.79 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
70. F13D12.6 F13D12.6 70.80 1972.78 Uncharacterized serine carboxypeptidase F13S12.6 [Source:UniProtKB/Swiss-Prot;Acc:P52715]
71. F31E3.5 eef-1A.1 70.80 1972.78 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
72. W09C5.6 rpl-31 70.80 1972.78 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
73. D1007.6 rps-10 69.50 1936.56 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
74. F20B6.2 vha-12 69.50 1936.56 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
75. ZK622.3 pmt-1 69.50 1936.56 Phosphoethanolamine MethylTransferase [Source:RefSeq peptide;Acc:NP_494990]
76. F19B2.5 F19B2.5 68.20 1900.33
77. R02F2.1 R02F2.1 68.20 1900.33
78. R13A5.8 rpl-9 68.20 1900.33 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
79. W09C5.8 W09C5.8 68.20 1900.33
80. F28H1.2 cpn-3 66.90 1864.11 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
81. R11A5.4 pck-2 66.90 1864.11 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
82. F07D10.1 rpl-11.2 65.60 1827.89 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_508413]
83. W06H8.8 ttn-1 65.60 1827.89 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
84. W07G4.4 lap-2 64.40 1794.45 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
85. Y69A2AR.18 Y69A2AR.18 64.40 1794.45
86. C06B8.8 rpl-38 63.10 1758.23 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
87. C09H10.2 rpl-41 63.10 1758.23 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
88. F25H2.5 ndk-1 63.10 1758.23 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
89. VC5.3 npa-1 63.10 1758.23 Nematode Polyprotein Allergen related [Source:RefSeq peptide;Acc:NP_504795]
90. Y79H2A.1 brp-1 63.10 1758.23 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
91. C42C1.14 rpl-34 61.80 1722.00 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
92. F52D10.3 ftt-2 61.80 1722.00 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
93. C14B9.7 rpl-21 60.50 1685.78 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
94. F13B10.2 rpl-3 60.50 1685.78 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
95. F25A2.1 F25A2.1 59.30 1652.34
96. F28C6.7 rpl-26 59.30 1652.34 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
97. F46H5.3 F46H5.3 59.30 1652.34 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
98. T07A9.14 T07A9.14 59.30 1652.34
99. T25F10.6 clik-1 59.30 1652.34 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
100. ZC434.2 rps-7 59.30 1652.34 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA