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Experiment herm3, section s4.

Sample reads: 275. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F52H3.7 lec-2 16.50 60039.30 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
2. F38B2.1 ifa-1 8.11 29510.22 Intermediate filament protein ifa-1 [Source:UniProtKB/Swiss-Prot;Acc:P90901]
3. ZK270.2 frm-1 8.11 29510.22 FERM domain (protein4.1-ezrin-radixin-moesin) family [Source:RefSeq peptide;Acc:NP_493600]
4. F47B7.1 F47B7.1 5.04 18339.28 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
5. C06A8.3 C06A8.3 3.01 10952.62
6. C24H10.5 cal-5 3.01 10952.62 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
7. F11E6.3 F11E6.3 3.01 10952.62
8. K08D12.6 K08D12.6 3.01 10952.62
9. W09D6.5 W09D6.5 3.01 10952.62
10. Y82E9BR.3 Y82E9BR.3 3.01 10952.62 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
11. B0350.2 unc-44 2.00 7277.49 AO66 ankyrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECZ1]
12. C06C3.1 mel-11 2.00 7277.49 MEL-11; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEB3]
13. C23F12.2 2.00 7277.49
14. F28B12.2 egl-44 2.00 7277.49 Transcription enhancer factor-like protein egl-44 [Source:UniProtKB/Swiss-Prot;Acc:Q19849]
15. F36A2.7 F36A2.7 2.00 7277.49
16. K10B3.10 spc-1 2.00 7277.49 SPeCtrin [Source:RefSeq peptide;Acc:NP_001256999]
17. M03F4.2 act-4 2.00 7277.49 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
18. R05G6.7 vdac-1 2.00 7277.49 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
19. RIT6P.424 2.00 7277.49
20. T17H7.4 pat-12 2.00 7277.49 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_497245]
21. T28D6.3 T28D6.3 2.00 7277.49
22. W07B8.5 cpr-5 2.00 7277.49 Cathepsin B-like cysteine proteinase 5 [Source:UniProtKB/Swiss-Prot;Acc:P43509]
23. W09C5.6 rpl-31 2.00 7277.49 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
24. Y105E8A.24 2.00 7277.49
25. Y105E8B.1 lev-11 2.00 7277.49 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
26. Y53C10A.12 hsf-1 2.00 7277.49 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
27. Y57G11C.13 arl-8 2.00 7277.49 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
28. Y57G11C.16 rps-18 2.00 7277.49 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
29. ZC247.1 ZC247.1 2.00 7277.49
30. ZC410.5 ZC410.5 2.00 7277.49
31. ZK637.13 glb-1 2.00 7277.49 Globin-like protein [Source:UniProtKB/Swiss-Prot;Acc:P30627]
32. AH6.5 mex-6 1.00 3638.75 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
33. B0024.2 col-150 1.00 3638.75 COLlagen [Source:RefSeq peptide;Acc:NP_505647]
34. B0041.4 rpl-4 1.00 3638.75 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
35. B0361.5 psd-1 1.00 3638.75 Phosphatidylserine decarboxylase proenzyme Phosphatidylserine decarboxylase alpha chain Phosphatidylserine decarboxylase beta chain [Source:UniProtKB/Swiss-Prot;Acc:Q10949]
36. B0416.5 B0416.5 1.00 3638.75
37. B0513.3 rpl-29 1.00 3638.75 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
38. C03B1.12 lmp-1 1.00 3638.75 LAMP family protein lmp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q11117]
39. C03G6.19 srp-6 1.00 3638.75 SeRPin [Source:RefSeq peptide;Acc:NP_504890]
40. C06B8.8 rpl-38 1.00 3638.75 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
41. C07G2.2 atf-7 1.00 3638.75 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
42. C08F8.1 pfd-1 1.00 3638.75 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
43. C08H9.2 vgln-1 1.00 3638.75 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
44. C10G8.8 C10G8.8 1.00 3638.75
45. C12D8.16 fipr-7 1.00 3638.75 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001023652]
46. C14F11.5 hsp-43 1.00 3638.75 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001123107]
47. C16C2.4 C16C2.4 1.00 3638.75
48. C24F3.1 tram-1 1.00 3638.75 Translocating chain-associated membrane protein [Source:RefSeq peptide;Acc:NP_501869]
49. C27D11.1 egl-45 1.00 3638.75 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
50. C28C12.4 C28C12.4 1.00 3638.75
51. C30G4.7 1.00 3638.75
52. C34E10.6 atp-2 1.00 3638.75 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
53. C37C3.2 C37C3.2 1.00 3638.75 Eukaryotic translation initiation factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q22918]
54. C38C6.2 atgp-2 1.00 3638.75 Amino acid Transporter GlycoProtein subunit [Source:RefSeq peptide;Acc:NP_001254435]
55. C45G3.5 gip-2 1.00 3638.75 Gamma-tubulin Interacting Protein [Source:RefSeq peptide;Acc:NP_001021044]
56. C47B2.2 C47B2.2 1.00 3638.75
57. C51E3.7 egl-3 1.00 3638.75 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
58. C52D10.11 flp-17 1.00 3638.75 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_503051]
59. C53A5.3 hda-1 1.00 3638.75 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
60. CC4.3 smu-1 1.00 3638.75 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
61. D2030.3 D2030.3 1.00 3638.75
62. D2096.8 nap-1 1.00 3638.75 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
63. E01G4.3 E01G4.3 1.00 3638.75
64. E04A4.7 cyc-2.1 1.00 3638.75 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
65. F01F1.1 hpo-10 1.00 3638.75
66. F07A5.7 unc-15 1.00 3638.75 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
67. F09F7.2 mlc-3 1.00 3638.75 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
68. F11A1.3 daf-12 1.00 3638.75 Nuclear hormone receptor family member daf-12 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF5]
69. F11C3.3 unc-54 1.00 3638.75 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
70. F12F6.5 srgp-1 1.00 3638.75 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
71. F14F7.1 col-98 1.00 3638.75 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
72. F18H3.3 pab-2 1.00 3638.75 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_510259]
73. F20H11.3 mdh-2 1.00 3638.75 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
74. F21F3.1 pgal-1 1.00 3638.75 Probable peptidyl-alpha-hydroxyglycine alpha-amidating lyase F21F3.1 [Source:UniProtKB/Swiss-Prot;Acc:P91268]
75. F22E10.3 pgp-14 1.00 3638.75 P-GlycoProtein related [Source:RefSeq peptide;Acc:NP_510128]
76. F25H5.3 pyk-1 1.00 3638.75 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
77. F28D1.7 rps-23 1.00 3638.75 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
78. F29C4.6 tut-1 1.00 3638.75 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
79. F29C4.7 grld-1 1.00 3638.75 Glutamate Receptor Level Decreased [Source:RefSeq peptide;Acc:NP_741283]
80. F30F8.3 gras-1 1.00 3638.75 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
81. F32B6.1 nhr-4 1.00 3638.75 Nuclear hormone receptor family member nhr-4 [Source:UniProtKB/Swiss-Prot;Acc:O45436]
82. F35D11.5 F35D11.5 1.00 3638.75
83. F37C12.4 rpl-36 1.00 3638.75 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
84. F38E1.7 mom-2 1.00 3638.75
85. F39B2.10 dnj-12 1.00 3638.75 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
86. F40A3.2 F40A3.2 1.00 3638.75
87. F40F4.2 lbp-2 1.00 3638.75 Fatty acid-binding protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20224]
88. F42A8.2 sdhb-1 1.00 3638.75 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09545]
89. F44G3.6 skr-3 1.00 3638.75 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_507059]
90. F44G4.2 F44G4.2 1.00 3638.75 Probable NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20412]
91. F45H10.3 F45H10.3 1.00 3638.75
92. F46F11.11 F46F11.11 1.00 3638.75
93. F46F2.3 F46F2.3 1.00 3638.75
94. F52B10.1 nmy-1 1.00 3638.75 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_508504]
95. F53A2.7 acaa-2 1.00 3638.75 ACetyl-CoA Acyltransferase 2 homolog [Source:RefSeq peptide;Acc:NP_499752]
96. F53C11.4 F53C11.4 1.00 3638.75
97. F54B3.1 F54B3.1 1.00 3638.75
98. F54C9.5 rpl-5 1.00 3638.75 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
99. F55A11.7 F55A11.7 1.00 3638.75
100. F55A4.1 sec-22 1.00 3638.75 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_508198]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA