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Experiment herm3, section s11.

Sample reads: 76,180. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 725.00 9517.25
2. F42F12.7 nspc-14 639.00 8388.31 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872249]
3. H05L03.3 H05L03.3 584.00 7666.31
4. F42F12.9 nspc-10 556.00 7298.75 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872250]
5. F42F12.10 nspc-12 508.00 6668.64 Nematode Specific Peptide family, group C [Source:UniProtKB/TrEMBL;Acc:G5EC48]
6. T04C12.4 act-3 487.00 6392.97 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
7. T04C12.6 act-1 468.00 6143.55 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
8. F02A9.3 far-2 456.00 5986.02 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
9. T27E9.1 ant-1.1 456.00 5986.02 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
10. T27E4.4 fip-2 450.00 5907.26 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
11. F42F12.8 nspc-15 428.00 5618.46 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510074]
12. C03G5.11 nspc-4 407.00 5342.79 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024348]
13. F11C3.3 unc-54 402.00 5277.15 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
14. F09F7.2 mlc-3 398.00 5224.64 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
15. M03F4.2 act-4 393.00 5159.01 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
16. F42F12.1 nspc-9 366.00 4804.57 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510070]
17. D1025.4 nspc-20 362.00 4752.06 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510417]
18. C03G5.2 nspc-7 358.00 4699.55 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_741862]
19. C03G5.8 nspc-1 350.00 4594.53 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024352]
20. M18.1 col-129 350.00 4594.53 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
21. C49F5.1 sams-1 335.00 4397.63 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
22. F07A5.7 unc-15 321.00 4213.84 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
23. F11E6.3 F11E6.3 321.00 4213.84
24. Y82E9BR.3 Y82E9BR.3 321.00 4213.84 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
25. C36E6.3 mlc-1 314.00 4121.95 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
26. K10B3.9 mai-1 300.00 3938.17 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
27. F57B1.4 col-160 294.00 3859.41 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
28. K02F2.2 ahcy-1 294.00 3859.41 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
29. C06A8.3 C06A8.3 270.00 3544.36
30. F11G11.11 col-20 270.00 3544.36 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
31. F42F12.6 nspc-13 270.00 3544.36 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510073]
32. C03G5.10 nspc-3 259.00 3399.96 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024347]
33. F25H2.5 ndk-1 259.00 3399.96 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
34. F26F12.1 col-140 259.00 3399.96 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
35. C24F3.6 col-124 256.00 3360.57 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
36. T05A1.2 col-122 251.00 3294.94 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
37. F13D12.4 alh-8 248.00 3255.56 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
38. C54D10.3 C54D10.3 245.00 3216.17
39. R10E11.8 vha-1 243.00 3189.92 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
40. H06O01.1 pdi-3 230.00 3019.27
41. Y105E8B.1 lev-11 230.00 3019.27 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
42. C18A11.7 dim-1 225.00 2953.63 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
43. F31E3.5 eef-1A.1 225.00 2953.63 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
44. T25F10.6 clik-1 225.00 2953.63 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
45. F46H5.3 F46H5.3 216.00 2835.48 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
46. F42C5.8 rps-8 211.00 2769.85 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
47. F38A3.1 col-81 207.00 2717.34 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
48. F13B10.2 rpl-3 202.00 2651.70 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
49. F54E7.2 rps-12 200.00 2625.45 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
50. RIT6P.22 198.00 2599.19
51. R05G6.7 vdac-1 196.00 2572.94 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
52. C34F6.2 col-178 194.00 2546.69 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
53. E04A4.7 cyc-2.1 194.00 2546.69 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
54. F28H1.2 cpn-3 191.00 2507.30 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
55. F52H3.7 lec-2 191.00 2507.30 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
56. W03G11.1 col-181 191.00 2507.30 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
57. F01G4.6 F01G4.6 185.00 2428.54 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
58. ZK1193.1 col-19 185.00 2428.54 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
59. D1025.6 nspc-16 179.00 2349.78 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510416]
60. F41F3.4 col-139 175.00 2297.27 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
61. F54C1.7 pat-10 173.00 2271.01 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
62. F11H8.3 col-8 169.00 2218.50 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
63. T05A8.3 T05A8.3 169.00 2218.50
64. C34E10.6 atp-2 167.00 2192.25 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
65. F01G12.5 let-2 165.00 2166.00 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
66. F23B2.5 flp-1 165.00 2166.00 FMRFamide-like neuropeptides 1 PNFMRY-amide AGSDPNFLRF-amide SQPNFLRF-amide ASGDPNFLRF-amide SDPNFLRF-amide AAADPNFLRF-amide SADPNFLRF-amide PNFLRF-amide [Source:UniProtKB/Swiss-Prot;Acc:P41855]
67. W05B2.5 col-93 163.00 2139.74 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
68. T20G5.2 cts-1 162.00 2126.61 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
69. C09G5.5 col-80 158.00 2074.10 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
70. C15H9.11 C15H9.11 158.00 2074.10
71. T07C4.5 ttr-15 158.00 2074.10 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
72. Y77E11A.15 col-106 158.00 2074.10 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
73. C53B4.5 col-119 156.00 2047.85 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
74. Y49A3A.3 Y49A3A.3 156.00 2047.85
75. D1025.9 nspc-19 154.00 2021.60 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024512]
76. T04C12.5 act-2 154.00 2021.60 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
77. F55D10.2 rpl-25.1 152.00 1995.34 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
78. Y105E8A.16 rps-20 151.00 1982.21 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
79. ZC15.8 pqn-94 151.00 1982.21 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
80. F10C1.7 ifb-2 149.00 1955.96 Intermediate filament protein ifb-2 [Source:UniProtKB/Swiss-Prot;Acc:Q19286]
81. F52D10.3 ftt-2 147.00 1929.70 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
82. Y69A2AR.18 Y69A2AR.18 147.00 1929.70
83. C45B2.1 C45B2.1 145.00 1903.45
84. F40F11.1 rps-11 145.00 1903.45 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
85. C03G5.9 nspc-2 143.00 1877.20 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024353]
86. C04F12.4 rpl-14 142.00 1864.07 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
87. Y24D9A.4 rpl-7A 142.00 1864.07 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
88. C44B12.2 ost-1 140.00 1837.81 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
89. Y38A10A.5 crt-1 140.00 1837.81 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
90. C03G5.13 nspc-6 138.00 1811.56 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024353]
91. F27C1.7 atp-3 137.00 1798.43 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
92. Y71F9AL.13 rpl-1 137.00 1798.43 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
93. B0041.4 rpl-4 135.00 1772.18 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
94. F33A8.3 cey-1 135.00 1772.18 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
95. RIT1P.688 135.00 1772.18
96. F15A2.1 col-184 133.00 1745.92 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
97. F56B6.4 gyg-1 132.00 1732.80 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
98. R07B1.10 lec-8 132.00 1732.80 Probable galaptin lec-8 [Source:UniProtKB/Swiss-Prot;Acc:Q09610]
99. K02G10.4 flp-11 130.00 1706.54 FMRFamide-like neuropeptides 11 AMRNALVRF-amide ASGGMRNALVRF-amide SPLDEEDFAPESPLQ-amide NGAPQPFVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q21156]
100. T05G5.6 ech-6 130.00 1706.54 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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