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Experiment herm1, section s12.

Sample reads: 22,707. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 450.00 19818.09 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. F02A9.3 far-2 407.00 17924.36 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
3. T04C12.4 act-3 371.00 16338.91 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. M03F4.2 act-4 230.00 10129.24 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
5. Y82E9BR.3 Y82E9BR.3 225.00 9909.04 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
6. F07A5.7 unc-15 223.00 9820.96 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
7. T27E4.4 fip-2 216.00 9512.68 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
8. Y105E8B.1 lev-11 185.00 8147.44 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
9. F28H1.2 cpn-3 183.00 8059.36 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
10. C36E6.3 mlc-1 179.00 7883.19 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
11. F11C3.3 unc-54 173.00 7618.95 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
12. F54C1.7 pat-10 158.00 6958.35 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
13. T04C12.5 act-2 152.00 6694.11 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
14. F09F7.2 mlc-3 151.00 6650.07 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
15. C36E6.5 mlc-2 132.00 5813.31 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
16. M18.1 col-129 130.00 5725.23 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
17. R06C7.10 myo-1 130.00 5725.23 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
18. T27E9.1 ant-1.1 123.00 5416.94 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
19. F46H5.3 F46H5.3 122.00 5372.90 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
20. F52H3.7 lec-2 122.00 5372.90 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
21. F01G12.5 let-2 111.00 4888.46 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
22. T05A1.2 col-122 106.00 4668.26 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
23. T20G5.7 dod-6 106.00 4668.26 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
24. F11H8.3 col-8 103.00 4536.14 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
25. F41F3.4 col-139 95.70 4214.65 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
26. K08D12.6 K08D12.6 94.30 4152.99
27. F25H2.5 ndk-1 92.80 4086.93 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
28. H05L03.3 H05L03.3 92.80 4086.93
29. T25F10.6 clik-1 92.80 4086.93 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
30. C14F5.3 tnt-3 90.00 3963.62 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
31. K02G10.4 flp-11 90.00 3963.62 FMRFamide-like neuropeptides 11 AMRNALVRF-amide ASGGMRNALVRF-amide SPLDEEDFAPESPLQ-amide NGAPQPFVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q21156]
32. T18D3.4 myo-2 90.00 3963.62 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
33. C14B9.1 hsp-12.2 88.60 3901.96 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
34. C53C9.2 C53C9.2 88.60 3901.96
35. W03F8.1 tni-4 87.20 3840.30 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
36. ZK721.2 unc-27 83.00 3655.34 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
37. F38A3.1 col-81 81.60 3593.68 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
38. C34E10.6 atp-2 77.50 3413.12 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
39. E04A4.7 cyc-2.1 77.50 3413.12 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
40. C18A11.7 dim-1 76.20 3355.86 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
41. F08B6.4 unc-87 76.20 3355.86 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
42. Y77E11A.15 col-106 73.50 3236.95 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
43. F02A9.2 far-1 72.20 3179.70 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
44. F31E3.5 eef-1A.1 72.20 3179.70 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
45. K10B3.9 mai-1 72.20 3179.70 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
46. C50H2.12 fipr-10 69.50 3060.79 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001023726]
47. C45G9.6 C45G9.6 66.90 2946.29
48. F37C12.9 rps-14 66.90 2946.29 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
49. F57B1.4 col-160 66.90 2946.29 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
50. Y5F2A.1 ttr-16 66.90 2946.29 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
51. Y24D9A.4 rpl-7A 63.10 2778.94 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
52. C06A8.3 C06A8.3 61.80 2721.68
53. C49G7.3 C49G7.3 61.80 2721.68
54. F40F11.1 rps-11 61.80 2721.68 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
55. Y69A2AR.18 Y69A2AR.18 61.80 2721.68
56. F54E7.2 rps-12 60.50 2664.43 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
57. T22E5.5 mup-2 60.50 2664.43 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
58. C44B12.2 ost-1 59.30 2611.58 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
59. F11G11.11 col-20 59.30 2611.58 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
60. RIT1P.688 59.30 2611.58
61. W03G11.1 col-181 59.30 2611.58 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
62. W06H8.8 ttn-1 59.30 2611.58 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
63. C09D1.1 unc-89 56.80 2501.48 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
64. T15B7.4 col-142 55.50 2444.23 COLlagen [Source:RefSeq peptide;Acc:NP_504736]
65. C24F3.6 col-124 54.30 2391.38 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
66. C42C1.14 rpl-34 54.30 2391.38 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
67. F26F12.1 col-140 54.30 2391.38 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
68. H28O16.1 H28O16.1 54.30 2391.38 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
69. C44B12.5 perm-4 53.00 2334.13 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
70. F49D11.8 cpn-4 53.00 2334.13 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
71. C03G5.11 nspc-4 51.80 2281.28 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024348]
72. C03G5.2 nspc-7 51.80 2281.28 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_741862]
73. C03G5.8 nspc-1 51.80 2281.28 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024352]
74. D1007.6 rps-10 51.80 2281.28 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
75. T21H3.3 cmd-1 51.80 2281.28 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
76. B0041.4 rpl-4 50.60 2228.43 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
77. F15A2.1 col-184 50.60 2228.43 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
78. F39B2.6 rps-26 50.60 2228.43 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
79. F53A9.10 tnt-2 50.60 2228.43 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
80. F20H11.3 mdh-2 49.40 2175.59 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
81. F49E2.5 F49E2.5 49.40 2175.59
82. F52D10.3 ftt-2 49.40 2175.59 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
83. W05B2.5 col-93 49.40 2175.59 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
84. Y71F9AL.13 rpl-1 49.40 2175.59 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
85. C34F6.2 col-178 48.20 2122.74 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
86. C04F12.4 rpl-14 47.00 2069.89 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
87. C16A3.9 rps-13 47.00 2069.89 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
88. K02B2.5 rps-25 47.00 2069.89 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
89. C06B8.8 rpl-38 45.80 2017.04 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
90. F10B5.1 rpl-10 45.80 2017.04 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
91. F37C12.4 rpl-36 45.80 2017.04 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
92. F42G8.12 isp-1 45.80 2017.04 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
93. F11E6.3 F11E6.3 44.60 1964.19
94. F13B10.2 rpl-3 44.60 1964.19 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
95. F56E10.4 rps-27 44.60 1964.19 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
96. K12G11.3 sodh-1 44.60 1964.19 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
97. C50H2.10 fipr-11 43.40 1911.34 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_741606]
98. D1025.4 nspc-20 43.40 1911.34 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510417]
99. F23D12.6 fipr-3 43.40 1911.34 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_872256]
100. Y67H2A.5 Y67H2A.5 43.40 1911.34
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA