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Experiment male4, region R4.

Sample reads: 46,100. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T27E9.1 ant-1.1 457.57 9926.11 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
2. F02A9.3 far-2 394.63 8560.62 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
3. T04C12.6 act-1 394.63 8560.62 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. T27E4.4 fip-2 382.52 8298.02 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
5. F11H8.3 col-8 368.00 7982.91 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
6. Y82E9BR.3 Y82E9BR.3 351.05 7615.27 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
7. F26F12.1 col-140 346.21 7510.23 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
8. K08D12.6 K08D12.6 319.57 6932.52
9. T05A1.2 col-122 297.79 6459.85 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
10. T04C12.4 act-3 295.36 6407.33 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
11. C24F3.6 col-124 285.68 6197.26 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
12. W06H8.8 ttn-1 285.68 6197.26 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
13. F09F7.2 mlc-3 271.15 5882.14 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
14. C34F6.3 col-179 254.21 5514.51 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
15. M03F4.2 act-4 254.21 5514.51 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
16. C53B4.5 col-119 238.71 5178.38 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
17. F54C1.7 pat-10 235.32 5104.86 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
18. C14B9.1 hsp-12.2 224.67 4873.77 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
19. C34F6.2 col-178 214.50 4653.19 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
20. T20G5.7 dod-6 214.50 4653.19 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
21. E04A4.7 cyc-2.1 211.11 4579.67 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
22. F11G11.11 col-20 211.11 4579.67 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
23. C36E6.5 mlc-2 200.94 4359.09 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
24. F11C3.3 unc-54 200.94 4359.09 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
25. Y77E11A.15 col-106 197.56 4285.56 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
26. Y105E8B.1 lev-11 184.48 4001.96 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
27. F07A5.7 unc-15 181.09 3928.43 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
28. C36E6.3 mlc-1 177.94 3860.16 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
29. F46H5.3 F46H5.3 161.97 3513.53 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
30. F28H1.2 cpn-3 158.82 3445.25 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
31. T15B7.3 col-143 152.77 3313.96 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
32. W03G11.1 col-181 152.77 3313.96 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
33. F20A1.1 F20A1.1 149.62 3245.68
34. R06C7.10 myo-1 146.47 3177.41 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
35. K02F2.2 ahcy-1 143.57 3114.38 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
36. K02F3.3 far-8 143.57 3114.38 Fatty Acid/Retinol binding protein [Source:RefSeq peptide;Acc:NP_497273]
37. F01G4.6 F01G4.6 140.42 3046.11 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
38. T02B11.3 T02B11.3 134.37 2914.81
39. C34E10.6 atp-2 131.46 2851.79 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
40. W03F8.1 tni-4 125.41 2720.49 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
41. C06A8.3 C06A8.3 122.50 2657.47
42. F25H2.5 ndk-1 122.50 2657.47 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
43. Y69A2AR.18 Y69A2AR.18 122.50 2657.47
44. F15A2.1 col-184 116.69 2531.42 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
45. F57B1.4 col-160 116.69 2531.42 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
46. T18D3.4 myo-2 116.69 2531.42 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
47. C14F5.3 tnt-3 113.79 2468.40 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
48. K12G11.3 sodh-1 113.79 2468.40 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
49. F02A9.2 far-1 110.88 2405.37 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
50. F14F7.1 col-98 110.88 2405.37 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
51. F15A4.6 F15A4.6 110.88 2405.37
52. K10B3.9 mai-1 110.88 2405.37 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
53. RIT6P.22 110.88 2405.37
54. T20G5.2 cts-1 110.88 2405.37 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
55. W03G11.1b 110.88 2405.37
56. F56B3.1 col-103 105.07 2279.33 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
57. Y105C5B.5 Y105C5B.5 105.07 2279.33
58. F42F12.1 nspc-9 102.17 2216.31 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510070]
59. H28O16.1 H28O16.1 102.17 2216.31 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
60. R10E11.8 vha-1 102.17 2216.31 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
61. F31E3.5 eef-1A.1 99.26 2153.28 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
62. F37C12.4 rpl-36 99.26 2153.28 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
63. D1025.4 nspc-20 96.60 2095.51 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510417]
64. F01G12.5 let-2 96.60 2095.51 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
65. F08B6.4 unc-87 96.60 2095.51 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
66. F52H3.7 lec-2 96.60 2095.51 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
67. T04C12.5 act-2 96.60 2095.51 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
68. T25F10.6 clik-1 96.60 2095.51 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
69. C54D10.3 C54D10.3 93.69 2032.49
70. C42C1.14 rpl-34 91.03 1974.72 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
71. F42C5.8 rps-8 91.03 1974.72 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
72. F53F4.13 F53F4.13 91.03 1974.72
73. F56E10.4 rps-27 91.03 1974.72 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
74. RIT2P.88 91.03 1974.72
75. ZK1193.1 col-19 91.03 1974.72 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
76. ZK829.4 gdh-1 91.03 1974.72 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
77. F27C1.7 atp-3 88.13 1911.70 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
78. F40F11.1 rps-11 88.13 1911.70 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
79. Y71F9AL.13 rpl-1 88.13 1911.70 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
80. Y71H2AM.5 Y71H2AM.5 88.13 1911.70
81. C49G7.3 C49G7.3 85.46 1853.92
82. K02B2.5 rps-25 85.46 1853.92 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
83. R05G6.7 vdac-1 85.46 1853.92 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
84. R53.4 R53.4 85.46 1853.92 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
85. RIT1P.688 85.46 1853.92
86. ZK973.6 anc-1 85.46 1853.92 Nuclear anchorage protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4M4]
87. C09D1.1 unc-89 82.56 1790.90 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
88. F13B10.2 rpl-3 82.56 1790.90 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
89. F26D10.3 hsp-1 82.56 1790.90 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
90. W05B2.5 col-93 82.56 1790.90 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
91. Y5F2A.1 ttr-16 82.56 1790.90 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
92. RIT6P.424 79.89 1733.13
93. F15E11.1 pud-2.1 76.99 1670.11 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503640]
94. Y37D8A.14 cco-2 76.99 1670.11 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
95. B0041.4 rpl-4 74.33 1612.34 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
96. C49F5.1 sams-1 74.33 1612.34 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
97. D1007.6 rps-10 74.33 1612.34 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
98. F37C12.9 rps-14 74.33 1612.34 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
99. C45B2.1 C45B2.1 71.66 1554.57
100. C45G9.6 C45G9.6 71.66 1554.57
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA