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Experiment herm4, region R3.

Sample reads: 105,033. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.4 act-3 1465.35 13951.41 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. T04C12.6 act-1 1312.65 12497.58 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. T20G5.7 dod-6 1063.29 10123.44 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
4. M03F4.2 act-4 958.22 9123.10 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
5. F09F7.2 mlc-3 787.31 7495.88 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
6. F11C3.3 unc-54 746.69 7109.08 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
7. T27E9.1 ant-1.1 666.83 6348.82 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
8. F07A5.7 unc-15 612.20 5828.65 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
9. Y105E8B.1 lev-11 586.98 5588.57 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
10. C36E6.3 mlc-1 577.18 5495.20 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
11. F02A9.3 far-2 570.17 5428.51 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
12. Y82E9BR.3 Y82E9BR.3 563.17 5361.82 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
13. T25F10.6 clik-1 509.93 4854.98 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
14. K08D12.6 K08D12.6 505.73 4814.97
15. T04C12.5 act-2 490.32 4668.25 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
16. R06C7.10 myo-1 485.00 4617.57 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
17. F42F12.9 nspc-10 446.05 4246.78 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872250]
18. W06H8.8 ttn-1 445.49 4241.44 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
19. H05L03.3 H05L03.3 435.40 4145.41
20. K12G11.3 sodh-1 430.64 4100.06 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
21. C18A11.7 dim-1 425.88 4054.71 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
22. C34E10.6 atp-2 406.26 3867.98 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
23. T18D3.4 myo-2 403.60 3842.64 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
24. F42F12.7 nspc-14 402.22 3829.43 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872249]
25. F42F12.8 nspc-15 400.94 3817.30 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510074]
26. F52H3.7 lec-2 395.06 3761.28 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
27. K10B3.9 mai-1 378.25 3601.22 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
28. W03F8.1 tni-4 371.52 3537.20 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
29. F42F12.10 nspc-12 371.44 3536.40 Nematode Specific Peptide family, group C [Source:UniProtKB/TrEMBL;Acc:G5EC48]
30. C14B9.1 hsp-12.2 363.68 3462.51 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
31. F46H5.3 F46H5.3 349.67 3329.13 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
32. F42F12.1 nspc-9 346.87 3302.46 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510070]
33. F54C1.7 pat-10 340.42 3241.10 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
34. F28H1.2 cpn-3 318.01 3027.70 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
35. D1025.4 nspc-20 309.66 2948.20 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510417]
36. C03G5.11 nspc-4 286.35 2726.26 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024348]
37. F31E3.5 eef-1A.1 282.84 2692.92 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
38. F13D12.4 alh-8 282.42 2688.91 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
39. F25H2.5 ndk-1 280.60 2671.57 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
40. E04A4.7 cyc-2.1 279.06 2656.90 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
41. F01G12.5 let-2 278.78 2654.23 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
42. Y69A2AR.18 Y69A2AR.18 277.38 2640.90
43. F01G4.6 F01G4.6 274.86 2616.89 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
44. M18.1 col-129 273.04 2599.55 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
45. C49G7.3 C49G7.3 271.78 2587.55
46. R05G6.7 vdac-1 270.24 2572.87 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
47. T20G5.2 cts-1 267.29 2544.86 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
48. F08B6.4 unc-87 266.73 2539.53 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
49. F52D10.3 ftt-2 266.45 2536.86 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
50. T27E4.4 fip-2 263.37 2507.52 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
51. F15A4.6 F15A4.6 251.32 2392.81
52. C53C9.2 C53C9.2 251.04 2390.15
53. C44B12.2 ost-1 248.24 2363.47 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
54. T20G5.8 T20G5.8 246.70 2348.80
55. F56B6.4 gyg-1 246.28 2344.80 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
56. F11E6.3 F11E6.3 242.36 2307.45
57. F57B1.4 col-160 241.66 2300.78 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
58. T05A1.2 col-122 241.24 2296.78 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
59. F53A9.10 tnt-2 236.89 2255.43 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
60. R10E11.8 vha-1 235.35 2240.76 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
61. T22E5.5 mup-2 228.77 2178.07 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
62. B0041.4 rpl-4 228.35 2174.07 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
63. F11H8.3 col-8 227.09 2162.07 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
64. C03G5.2 nspc-7 225.60 2147.93 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_741862]
65. F20H11.3 mdh-2 223.03 2123.39 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
66. C36E6.5 mlc-2 222.32 2116.72 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
67. C03G5.8 nspc-1 217.16 2067.50 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024352]
68. ZC15.8 pqn-94 217.14 2067.37 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
69. K02F2.2 ahcy-1 212.66 2024.69 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
70. C06A8.3 C06A8.3 211.96 2018.02
71. F42C5.8 rps-8 209.02 1990.01 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
72. Y24D9A.4 rpl-7A 203.97 1941.99 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
73. C24F3.6 col-124 203.27 1935.32 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
74. F54E7.2 rps-12 202.29 1925.99 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
75. C14F5.3 tnt-3 200.89 1912.65 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
76. F27C1.7 atp-3 200.89 1912.65 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
77. F42F12.6 nspc-13 197.54 1880.77 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510073]
78. ZK721.2 unc-27 196.41 1869.97 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
79. C51E3.7 egl-3 193.33 1840.63 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
80. Y67H2A.5 Y67H2A.5 193.33 1840.63
81. F55D10.2 rpl-25.1 189.68 1805.95 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
82. F01D4.4 egl-21 188.84 1797.94
83. F11G11.11 col-20 184.78 1759.26 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
84. T05B4.3 phat-4 184.78 1759.26 PHAryngeal gland Toxin-related [Source:RefSeq peptide;Acc:NP_504152]
85. Y105E8A.16 rps-20 183.52 1747.26 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
86. H28O16.1 H28O16.1 178.48 1699.24 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
87. D1025.9 nspc-19 177.92 1693.91 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024512]
88. C34F6.2 col-178 176.51 1680.57 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
89. F49D11.8 cpn-4 176.51 1680.57 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
90. F38A3.1 col-81 174.27 1659.23 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
91. F26F12.1 col-140 171.61 1633.89 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
92. H06O01.1 pdi-3 171.33 1631.22
93. RIT1P.688 170.91 1627.22
94. ZK829.4 gdh-1 170.63 1624.55 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
95. Y77E11A.15 col-106 169.93 1617.88 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
96. ZC116.1 ZC116.1 168.39 1603.21
97. F10C1.2 ifb-1 166.99 1589.87 Intermediate filament protein ifb-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19289]
98. C03G5.10 nspc-3 166.76 1587.74 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024347]
99. F13B10.2 rpl-3 165.03 1571.20 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
100. T21H3.3 cmd-1 162.93 1551.19 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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