C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R03E9.1

Gene ID Gene Name Reads Transcripts Annotation
R03E9.1 mdl-1 15351 R03E9.1 MAD-Like [Source:RefSeq peptide;Acc:NP_509136]

Genes with expression patterns similar to R03E9.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R03E9.1 mdl-1 15351 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MAD-Like [Source:RefSeq peptide;Acc:NP_509136]
2. Y105C5B.28 gln-3 27333 6.689 0.923 0.739 0.803 0.739 0.879 0.957 0.844 0.805 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
3. F55D10.2 rpl-25.1 95984 6.657 0.867 0.829 0.832 0.829 0.892 0.959 0.700 0.749 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
4. F14F7.1 col-98 72968 6.623 0.825 0.764 0.759 0.764 0.936 0.952 0.821 0.802 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
5. F54C9.1 iff-2 63995 6.591 0.873 0.804 0.838 0.804 0.912 0.960 0.677 0.723 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
6. F56B3.1 col-103 45613 6.544 0.812 0.743 0.735 0.743 0.910 0.963 0.818 0.820 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
7. H27C11.1 nhr-97 12476 6.491 0.762 0.784 0.714 0.784 0.916 0.956 0.746 0.829 Nuclear hormone receptor family member nhr-97 [Source:UniProtKB/Swiss-Prot;Acc:Q9BJK5]
8. F58A4.7 hlh-11 15514 6.471 0.813 0.752 0.760 0.752 0.885 0.954 0.757 0.798 Helix-loop-helix protein 11 [Source:UniProtKB/Swiss-Prot;Acc:P34474]
9. F07A5.7 unc-15 276610 6.399 0.821 0.763 0.689 0.763 0.883 0.954 0.767 0.759 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. R01E6.3 cah-4 42749 6.396 0.739 0.690 0.769 0.690 0.928 0.960 0.798 0.822 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_510265]
11. Y77E11A.15 col-106 105434 6.297 0.770 0.714 0.692 0.714 0.905 0.956 0.795 0.751 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
12. T22E5.5 mup-2 65873 6.295 0.899 0.756 0.679 0.756 0.889 0.971 0.662 0.683 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
13. T05A1.2 col-122 163233 6.279 0.748 0.706 0.707 0.706 0.924 0.957 0.796 0.735 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
14. F08B6.4 unc-87 108779 6.274 0.866 0.713 0.735 0.713 0.899 0.965 0.640 0.743 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
15. F42G4.3 zyx-1 50908 6.263 0.726 0.807 0.822 0.807 0.862 0.975 0.557 0.707 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
16. C18A11.7 dim-1 110263 6.212 0.867 0.681 0.681 0.681 0.893 0.964 0.709 0.736 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
17. F40E10.3 csq-1 18817 6.2 0.852 0.724 0.718 0.724 0.879 0.959 0.594 0.750 Calsequestrin [Source:RefSeq peptide;Acc:NP_510438]
18. T14G12.3 tag-18 22633 6.18 0.878 0.764 0.691 0.764 0.806 0.968 0.579 0.730
19. T28B4.3 ttr-6 9497 6.17 0.843 0.727 0.583 0.727 0.810 0.959 0.720 0.801 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_509110]
20. F53A9.10 tnt-2 113410 6.143 0.825 0.717 0.706 0.717 0.852 0.957 0.657 0.712 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
21. M03F4.2 act-4 354219 6.116 0.780 0.776 0.751 0.776 0.687 0.963 0.748 0.635 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
22. F52H3.7 lec-2 176297 6.112 0.803 0.801 0.753 0.801 0.779 0.953 0.515 0.707 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
23. C50F4.5 his-41 14268 6.105 0.767 0.679 0.549 0.679 0.900 0.957 0.776 0.798 Probable histone H2B 3 [Source:UniProtKB/Swiss-Prot;Acc:Q27484]
24. F54E2.3 ketn-1 28256 6.102 0.808 0.676 0.683 0.676 0.881 0.959 0.690 0.729 KETtiN (Drosophila actin-binding) homolog [Source:RefSeq peptide;Acc:NP_503758]
25. F28H1.2 cpn-3 166879 6.097 0.828 0.683 0.740 0.683 0.856 0.976 0.657 0.674 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
26. R148.6 heh-1 40904 6.089 0.897 0.656 0.636 0.656 0.873 0.962 0.667 0.742 Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
27. F52D10.3 ftt-2 101404 6.079 0.719 0.672 0.656 0.672 0.906 0.960 0.723 0.771 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
28. C03B1.12 lmp-1 23111 6.04 0.775 0.555 0.650 0.555 0.920 0.954 0.812 0.819 LAMP family protein lmp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q11117]
29. C17G1.7 cysl-1 3159 5.967 0.746 0.617 0.809 0.617 0.878 0.953 0.655 0.692 Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93244]
30. F27D9.5 pcca-1 35848 5.915 0.596 0.549 0.653 0.549 0.927 0.959 0.840 0.842 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
31. C09B8.6 hsp-25 44939 5.851 0.854 0.724 0.796 0.724 0.792 0.950 0.415 0.596 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001024374]
32. F56B6.4 gyg-1 39789 5.827 0.900 0.602 0.674 0.602 0.841 0.951 0.592 0.665 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
33. K01D12.12 cdr-6 4426 5.765 0.749 0.519 0.608 0.519 0.909 0.953 0.861 0.647 CaDmium Responsive [Source:RefSeq peptide;Acc:NP_506113]
34. Y38F1A.9 oig-2 10083 5.754 0.893 0.600 0.702 0.600 0.812 0.952 0.521 0.674 One IG domain [Source:RefSeq peptide;Acc:NP_496767]
35. F13D12.2 ldh-1 23786 5.724 0.725 0.456 0.768 0.456 0.829 0.955 0.707 0.828 L-lactate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27888]
36. ZK1067.2 ZK1067.2 3161 5.705 0.893 0.449 0.703 0.449 0.888 0.954 0.624 0.745
37. R03G5.2 sek-1 4194 5.678 0.650 0.548 0.626 0.548 0.877 0.950 0.651 0.828 Dual specificity mitogen-activated protein kinase kinase sek-1 [Source:UniProtKB/Swiss-Prot;Acc:G5EDF7]
38. H28G03.2 H28G03.2 2556 5.636 0.689 0.345 0.748 0.345 0.916 0.968 0.816 0.809
39. T21D12.4 pat-6 5640 5.633 0.782 0.560 0.659 0.560 0.778 0.965 0.586 0.743 Paralyzed arrest at two-fold protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O16785]
40. C24A3.6 twk-18 7204 5.61 0.733 0.632 0.512 0.632 0.815 0.961 0.589 0.736 TWiK family of potassium channels protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q18120]
41. F41G4.2 cas-1 10929 5.371 0.684 0.530 0.508 0.530 0.826 0.956 0.636 0.701 Adenylyl cyclase-associated protein [Source:RefSeq peptide;Acc:NP_510714]
42. C06G1.4 ain-1 10090 5.367 0.409 0.570 0.427 0.570 0.910 0.959 0.727 0.795 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_510687]
43. F49C12.14 F49C12.14 795 5.215 0.813 0.186 0.656 0.186 0.877 0.956 0.780 0.761
44. M02D8.2 M02D8.2 617 5.184 0.850 0.410 0.636 0.410 0.771 0.966 0.430 0.711
45. F46F2.2 kin-20 7883 5.111 0.487 0.503 0.425 0.503 0.770 0.965 0.664 0.794 Casein kinase I isoform delta [Source:UniProtKB/Swiss-Prot;Acc:Q20471]
46. H37A05.2 H37A05.2 0 5.079 0.841 - 0.853 - 0.843 0.968 0.738 0.836
47. W06B11.2 puf-9 3321 5.056 0.404 0.500 0.363 0.500 0.885 0.966 0.729 0.709 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_508980]
48. T28F4.6 T28F4.6 0 5.047 0.839 - 0.771 - 0.843 0.951 0.781 0.862
49. M03A8.2 atg-2 3732 5.014 - 0.603 0.606 0.603 0.898 0.953 0.547 0.804 AuTophaGy (yeast Atg homolog) [Source:RefSeq peptide;Acc:NP_509145]
50. ZK470.4 ZK470.4 0 4.975 0.873 - 0.643 - 0.920 0.955 0.801 0.783
51. Y70C5A.2 Y70C5A.2 0 4.974 0.797 - 0.705 - 0.911 0.956 0.803 0.802
52. B0379.2 B0379.2 3303 4.963 0.815 0.200 0.602 0.200 0.836 0.966 0.610 0.734
53. K10C9.4 K10C9.4 0 4.769 0.809 - 0.632 - 0.899 0.950 0.714 0.765
54. F22F4.5 F22F4.5 442 4.763 0.747 - 0.641 - 0.874 0.959 0.734 0.808
55. T01B7.1 T01B7.1 0 4.601 0.824 - 0.724 - 0.800 0.966 0.580 0.707
56. B0513.1 lin-66 11549 4.398 0.249 0.326 0.186 0.326 0.893 0.959 0.691 0.768
57. C01B12.2 gmeb-1 2053 4.298 0.291 0.328 0.420 0.328 0.768 0.958 0.418 0.787 GMEB (Glucocorticoid Modulatory Element Binding protein) transcriptional regulator homolog [Source:RefSeq peptide;Acc:NP_493634]
58. F11C3.1 F11C3.1 0 4.071 0.563 - 0.559 - 0.720 0.961 0.516 0.752
59. C24H10.3 C24H10.3 0 4.064 0.254 - 0.264 - 0.892 0.962 0.891 0.801
60. ZK154.1 ZK154.1 0 4.036 0.787 - 0.621 - 0.580 0.952 0.380 0.716
61. Y34B4A.9 Y34B4A.9 5325 3.927 0.235 0.597 0.291 0.597 0.692 0.963 - 0.552
62. F21C10.11 F21C10.11 962 3.878 0.766 - - - 0.685 0.951 0.794 0.682
63. Y47D3B.9 bed-2 2456 3.798 0.450 0.308 0.418 0.308 0.784 0.950 0.580 - BED-type zinc finger putative transcription factor [Source:RefSeq peptide;Acc:NP_499474]
64. T20B12.6 mml-1 1803 3.597 0.429 0.315 0.296 0.315 - 0.960 0.617 0.665 Protein WBSCR14 homolog [Source:UniProtKB/Swiss-Prot;Acc:P41846]
65. T27E4.8 hsp-16.1 43612 3.517 - - - - 0.918 0.954 0.804 0.841 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
66. T27E4.2 hsp-16.11 43621 3.514 - - - - 0.934 0.967 0.804 0.809 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
67. R02F2.9 R02F2.9 5534 2.438 - 0.462 - 0.462 0.562 0.952 - -

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA