C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T27A3.1

Gene ID Gene Name Reads Transcripts Annotation
T27A3.1 trak-1 7779 T27A3.1a.1, T27A3.1a.2, T27A3.1b, T27A3.1c.1, T27A3.1c.2, T27A3.1d, T27A3.1e TRAK1 and TRAK2 related [Source:RefSeq peptide;Acc:NP_740861]

Genes with expression patterns similar to T27A3.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T27A3.1 trak-1 7779 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAK1 and TRAK2 related [Source:RefSeq peptide;Acc:NP_740861]
2. C14F11.1 got-2.2 16386 6.679 0.762 0.848 0.782 0.848 0.773 0.970 0.813 0.883 Aspartate aminotransferase [Source:RefSeq peptide;Acc:NP_741810]
3. F47B10.1 suca-1 22753 6.633 0.562 0.895 0.754 0.895 0.829 0.959 0.870 0.869 Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53588]
4. F46E10.10 mdh-1 38551 6.622 0.665 0.909 0.758 0.909 0.857 0.971 0.706 0.847 Malate dehydrogenase [Source:RefSeq peptide;Acc:NP_504656]
5. C03G5.1 sdha-1 32426 6.597 0.570 0.882 0.670 0.882 0.858 0.986 0.896 0.853 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09508]
6. R160.7 lst-2 3570 6.584 0.675 0.828 0.900 0.828 0.777 0.950 0.821 0.805 Lateral signaling target protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZD0]
7. K11D9.2 sca-1 71133 6.583 0.618 0.855 0.843 0.855 0.882 0.965 0.681 0.884 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
8. T01C8.1 aak-2 5650 6.507 0.562 0.841 0.836 0.841 0.789 0.956 0.832 0.850 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZQ4]
9. C32D5.9 lgg-1 49139 6.505 0.562 0.806 0.868 0.806 0.816 0.978 0.797 0.872
10. C05G5.4 sucl-1 31709 6.502 0.568 0.826 0.734 0.826 0.869 0.979 0.862 0.838 Probable succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53596]
11. K07A3.1 fbp-1 13261 6.501 0.528 0.927 0.822 0.927 0.826 0.967 0.678 0.826 Fructose-1,6-BiPhosphatase [Source:RefSeq peptide;Acc:NP_491004]
12. C35C5.4 mig-2 3260 6.478 0.600 0.892 0.837 0.892 0.724 0.973 0.827 0.733 Rac-like GTPase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV3]
13. F46F2.2 kin-20 7883 6.446 0.585 0.833 0.918 0.833 0.791 0.953 0.761 0.772 Casein kinase I isoform delta [Source:UniProtKB/Swiss-Prot;Acc:Q20471]
14. F08B6.2 gpc-2 29938 6.414 0.567 0.814 0.796 0.814 0.824 0.966 0.766 0.867 G Protein, Gamma subunit [Source:RefSeq peptide;Acc:NP_491935]
15. T14G11.3 immt-1 12837 6.414 0.543 0.835 0.700 0.835 0.821 0.976 0.822 0.882 Inner Membrane of MiTochondria protein homolog [Source:RefSeq peptide;Acc:NP_508475]
16. C44B7.10 acer-1 36460 6.354 0.589 0.822 0.857 0.822 0.802 0.953 0.668 0.841 ACEtyl-CoA Regulator [Source:RefSeq peptide;Acc:NP_495409]
17. ZK1058.1 mmcm-1 15851 6.342 0.577 0.828 0.805 0.828 0.825 0.961 0.686 0.832 Probable methylmalonyl-CoA mutase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q23381]
18. R02E12.2 mop-25.1 8263 6.34 0.597 0.836 0.734 0.836 0.794 0.964 0.725 0.854 MO25 (MOuse embryo scaffolding Protein) homolog [Source:RefSeq peptide;Acc:NP_001024819]
19. F02E8.1 asb-2 46847 6.337 0.558 0.778 0.748 0.778 0.830 0.955 0.815 0.875 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_508770]
20. K09A9.5 gas-1 21971 6.313 0.529 0.838 0.676 0.838 0.797 0.966 0.810 0.859 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873]
21. Y71G12A.3 tub-2 4497 6.303 0.597 0.784 0.863 0.784 0.795 0.957 0.683 0.840 TUBby-related [Source:RefSeq peptide;Acc:NP_001293352]
22. F41G4.2 cas-1 10929 6.297 0.515 0.819 0.697 0.819 0.790 0.955 0.828 0.874 Adenylyl cyclase-associated protein [Source:RefSeq peptide;Acc:NP_510714]
23. Y17G7B.7 tpi-1 19678 6.289 0.547 0.866 0.736 0.866 0.779 0.950 0.713 0.832 Triosephosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q10657]
24. H27C11.1 nhr-97 12476 6.279 0.510 0.797 0.740 0.797 0.819 0.965 0.810 0.841 Nuclear hormone receptor family member nhr-97 [Source:UniProtKB/Swiss-Prot;Acc:Q9BJK5]
25. K02G10.8 dnj-14 5398 6.249 0.390 0.852 0.892 0.852 0.651 0.956 0.812 0.844 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001257014]
26. C45E5.6 nhr-46 4653 6.245 0.473 0.821 0.951 0.821 0.730 0.936 0.801 0.712 Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001293738]
27. ZK632.10 ZK632.10 28231 6.234 0.624 0.726 0.889 0.726 0.825 0.958 0.640 0.846 UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
28. B0513.1 lin-66 11549 6.233 0.560 0.786 0.847 0.786 0.659 0.958 0.758 0.879
29. W01A11.3 unc-83 5196 6.225 0.700 0.764 0.810 0.764 0.729 0.956 0.802 0.700 Nuclear migration protein unc-83 [Source:UniProtKB/Swiss-Prot;Acc:Q23064]
30. C44B12.2 ost-1 94127 6.217 0.486 0.728 0.715 0.728 0.831 0.961 0.874 0.894 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
31. F53H10.2 saeg-1 16346 6.173 0.452 0.800 0.755 0.800 0.803 0.952 0.809 0.802 Suppressor of Activated EGL-4 [Source:RefSeq peptide;Acc:NP_505769]
32. T14E8.1 svh-2 5666 6.151 0.600 0.696 0.798 0.696 0.766 0.958 0.845 0.792 Tyrosine-protein kinase receptor svh-2 [Source:UniProtKB/Swiss-Prot;Acc:H2KZU7]
33. F58A4.7 hlh-11 15514 6.148 0.599 0.742 0.559 0.742 0.777 0.973 0.879 0.877 Helix-loop-helix protein 11 [Source:UniProtKB/Swiss-Prot;Acc:P34474]
34. Y71G12B.11 tln-1 7529 6.106 0.580 0.698 0.681 0.698 0.830 0.954 0.800 0.865 TaLiN [Source:RefSeq peptide;Acc:NP_001293439]
35. K04H4.1 emb-9 32527 6.104 0.526 0.699 0.688 0.699 0.840 0.960 0.818 0.874 Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]
36. F13D12.4 alh-8 106503 6.086 0.525 0.785 0.596 0.785 0.824 0.957 0.824 0.790 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
37. M02F4.8 aqp-7 53179 6.083 0.475 0.782 0.558 0.782 0.821 0.968 0.784 0.913 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_508515]
38. C46G7.4 pqn-22 11560 6.047 0.554 0.706 0.614 0.706 0.846 0.957 0.753 0.911 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_500907]
39. F27D9.5 pcca-1 35848 6.047 0.518 0.866 0.599 0.866 0.800 0.950 0.676 0.772 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
40. C17E4.9 nkb-1 32762 6.038 0.559 0.767 0.749 0.767 0.775 0.956 0.607 0.858 Sodium/potassium-transporting ATPase subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93235]
41. T12F5.4 lin-59 5187 5.987 0.430 0.777 0.824 0.777 0.691 0.950 0.746 0.792 Probable histone-lysine N-methyltransferase lin-59 [Source:UniProtKB/Swiss-Prot;Acc:O44757]
42. VW06B3R.1 ucr-2.1 23178 5.962 0.516 0.752 0.574 0.752 0.798 0.960 0.756 0.854 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_510012]
43. T05A10.1 sma-9 3815 5.95 0.688 0.641 0.806 0.641 0.682 0.951 0.793 0.748 SMAll [Source:RefSeq peptide;Acc:NP_741897]
44. F32A11.1 F32A11.1 20166 5.948 0.500 0.737 0.580 0.737 0.787 0.957 0.834 0.816
45. H28G03.2 H28G03.2 2556 5.864 0.535 0.718 0.599 0.718 0.734 0.957 0.728 0.875
46. C53B7.4 asg-2 33363 5.86 0.464 0.671 0.649 0.671 0.777 0.964 0.789 0.875 Probable ATP synthase subunit g 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q18803]
47. Y39G10AR.15 Y39G10AR.15 1487 5.84 0.399 0.622 0.686 0.622 0.814 0.952 0.884 0.861
48. M03F4.2 act-4 354219 5.785 0.549 0.657 0.660 0.657 0.535 0.967 0.912 0.848 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
49. F54C1.7 pat-10 205614 5.776 0.442 0.579 0.700 0.579 0.798 0.959 0.878 0.841 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
50. F40E10.3 csq-1 18817 5.766 0.498 0.640 0.618 0.640 0.755 0.950 0.803 0.862 Calsequestrin [Source:RefSeq peptide;Acc:NP_510438]
51. M03F4.7 calu-1 11150 5.757 0.452 0.829 0.554 0.829 0.738 0.955 0.763 0.637 CALUmenin (calcium-binding protein) homolog [Source:RefSeq peptide;Acc:NP_001024806]
52. K10B3.9 mai-1 161647 5.682 0.402 0.648 0.468 0.648 0.845 0.959 0.852 0.860 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
53. C14H10.2 C14H10.2 983 5.682 0.473 0.619 0.480 0.619 0.816 0.960 0.842 0.873
54. F35B3.5 ptrn-1 4690 5.624 0.591 0.594 0.768 0.594 0.724 0.953 0.737 0.663 PaTRoNin (microtubule-binding protein) homolog [Source:RefSeq peptide;Acc:NP_510751]
55. F14F4.3 mrp-5 7798 5.545 0.452 0.822 0.564 0.822 0.695 0.951 0.634 0.605
56. T11B7.4 alp-1 14867 5.528 0.525 0.540 0.474 0.540 0.796 0.966 0.787 0.900 ALP/Enigma encoding [Source:RefSeq peptide;Acc:NP_501534]
57. F54E2.3 ketn-1 28256 5.473 0.413 0.616 0.493 0.616 0.754 0.956 0.801 0.824 KETtiN (Drosophila actin-binding) homolog [Source:RefSeq peptide;Acc:NP_503758]
58. C09B8.6 hsp-25 44939 5.399 0.393 0.634 0.544 0.634 0.767 0.961 0.662 0.804 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001024374]
59. F42G4.3 zyx-1 50908 5.397 0.418 0.521 0.501 0.521 0.802 0.952 0.805 0.877 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
60. T05D4.1 aldo-1 66031 5.36 0.448 0.492 0.531 0.492 0.785 0.964 0.775 0.873 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
61. F56B6.4 gyg-1 39789 5.335 0.477 0.409 0.619 0.409 0.795 0.961 0.800 0.865 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
62. Y73F8A.6 ccg-1 16283 5.242 0.413 0.548 0.393 0.548 0.729 0.950 0.776 0.885 Conserved Cysteine/Glycine domain protein [Source:RefSeq peptide;Acc:NP_502842]
63. K03E6.6 pfn-3 9595 5.222 0.389 0.438 0.580 0.438 0.798 0.964 0.724 0.891 Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q21193]
64. C24H10.5 cal-5 38866 4.881 0.368 0.410 0.344 0.410 0.719 0.952 0.800 0.878 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
65. T22F3.7 T22F3.7 0 4.812 0.656 - 0.747 - 0.843 0.958 0.823 0.785
66. C17G1.7 cysl-1 3159 4.77 0.281 0.509 0.395 0.509 0.747 0.961 0.745 0.623 Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93244]
67. K02D10.2 K02D10.2 74 4.692 0.471 - 0.878 - 0.799 0.979 0.746 0.819
68. T04A11.3 igdb-1 3470 4.614 0.637 - 0.760 - 0.703 0.960 0.698 0.856 Ig-like and fibronectin type-III domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O18016]
69. T03G11.3 T03G11.3 98 4.553 0.474 - 0.758 - 0.787 0.958 0.719 0.857 Zinc finger C2HC domain-containing protein T03G11.3 [Source:UniProtKB/Swiss-Prot;Acc:Q22122]
70. M02D8.2 M02D8.2 617 4.546 0.443 0.098 0.608 0.098 0.789 0.956 0.689 0.865
71. F29C4.4 F29C4.4 0 4.535 0.558 - 0.657 - 0.805 0.959 0.685 0.871
72. H37A05.2 H37A05.2 0 4.341 0.489 - 0.367 - 0.837 0.966 0.817 0.865
73. Y110A2AL.8 ptc-3 2982 4.28 - 0.259 0.413 0.259 0.778 0.971 0.857 0.743 PaTChed family [Source:RefSeq peptide;Acc:NP_494384]
74. F26A3.5 F26A3.5 921 4.252 0.418 - 0.596 - 0.734 0.956 0.813 0.735
75. C34B2.9 C34B2.9 0 4.235 0.558 - 0.961 - 0.784 0.858 0.394 0.680
76. C48E7.6 C48E7.6 0 4.141 0.392 - 0.333 - 0.822 0.956 0.767 0.871
77. K09H9.7 K09H9.7 15593 4.111 - 0.661 - 0.661 0.675 0.954 0.592 0.568
78. Y94H6A.6 ubc-8 3142 4.066 - - 0.795 - 0.724 0.956 0.751 0.840 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_500245]
79. C11E4.t1 C11E4.t1 0 4.045 0.344 - 0.387 - 0.806 0.965 0.703 0.840
80. K09G1.2 K09G1.2 1161 4.031 0.453 - 0.286 - 0.770 0.962 0.688 0.872
81. T04C12.3 T04C12.3 9583 4.008 0.348 -0.082 0.449 -0.082 0.756 0.963 0.809 0.847
82. T22E7.1 lron-8 1811 3.967 0.550 - 0.246 - 0.667 0.964 0.723 0.817 eLRR (extracellular Leucine-Rich Repeat) ONly [Source:RefSeq peptide;Acc:NP_491676]
83. K11D12.8 K11D12.8 357 3.788 - - 0.496 - 0.682 0.959 0.762 0.889
84. Y105C5B.7 Y105C5B.7 0 3.733 0.310 - 0.218 - 0.662 0.952 0.742 0.849
85. F20G2.3 F20G2.3 0 3.704 0.347 - 0.368 - 0.622 0.952 0.715 0.700
86. C45B2.5 gln-1 1065 3.639 - 0.681 - 0.681 0.653 0.958 0.666 - GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_509012]
87. T22C8.8 vab-9 821 3.052 - - 0.511 - - 0.968 0.672 0.901 Cell junction protein VAB-9; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED30]

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA