C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0285.t1

Gene ID Gene Name Reads Transcripts Annotation
B0285.t1 B0285.t1 0 B0285.t1

Genes with expression patterns similar to B0285.t1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0285.t1 B0285.t1 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. F41E7.5 fipr-21 37102 5.104 0.883 - 0.805 - 0.845 0.957 0.795 0.819 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_509727]
3. W01C8.1 W01C8.1 0 5.069 0.818 - 0.809 - 0.936 0.955 0.770 0.781
4. T14F9.1 vha-15 32310 5.067 0.841 - 0.852 - 0.847 0.968 0.753 0.806 Probable V-type proton ATPase subunit H 2 [Source:UniProtKB/Swiss-Prot;Acc:Q22494]
5. C09G5.5 col-80 59933 5.029 0.886 - 0.847 - 0.888 0.953 0.694 0.761 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
6. F18E9.1 F18E9.1 0 5.02 0.867 - 0.813 - 0.864 0.967 0.681 0.828
7. F46F11.5 vha-10 61918 5.016 0.842 - 0.811 - 0.839 0.959 0.749 0.816 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
8. C01F6.6 nrfl-1 15103 5.011 0.815 - 0.850 - 0.878 0.964 0.672 0.832 NHERF (mammalian Na/H Exchange Regulatory Factor) Like [Source:RefSeq peptide;Acc:NP_741478]
9. F07C4.7 grsp-4 3454 4.955 0.880 - 0.836 - 0.727 0.962 0.740 0.810 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_504970]
10. W05B2.5 col-93 64768 4.942 0.893 - 0.832 - 0.889 0.955 0.606 0.767 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
11. W05B2.1 col-94 30273 4.941 0.896 - 0.868 - 0.871 0.951 0.623 0.732 COLlagen [Source:RefSeq peptide;Acc:NP_499410]
12. F17C8.4 ras-2 7248 4.928 0.887 - 0.783 - 0.899 0.951 0.714 0.694 R-RAS related [Source:RefSeq peptide;Acc:NP_497972]
13. C49F5.1 sams-1 101229 4.91 0.847 - 0.768 - 0.899 0.956 0.693 0.747 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
14. W05B2.6 col-92 29501 4.899 0.876 - 0.882 - 0.873 0.950 0.608 0.710 COLlagen [Source:RefSeq peptide;Acc:NP_499408]
15. R11A5.4 pck-2 55256 4.897 0.816 - 0.744 - 0.911 0.951 0.678 0.797 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
16. Y55H10A.1 vha-19 38495 4.891 0.830 - 0.775 - 0.849 0.954 0.674 0.809 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_500332]
17. C17H12.14 vha-8 74709 4.882 0.840 - 0.793 - 0.855 0.951 0.670 0.773 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
18. R03E1.2 vha-20 25289 4.868 0.857 - 0.789 - 0.839 0.958 0.674 0.751 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_510360]
19. F53G2.1 F53G2.1 0 4.862 0.896 - 0.841 - 0.692 0.959 0.632 0.842
20. T01H3.1 vha-4 57474 4.833 0.853 - 0.727 - 0.807 0.950 0.639 0.857 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_495659]
21. C53B4.5 col-119 131020 4.831 0.914 - 0.855 - 0.668 0.951 0.694 0.749 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
22. Y49A3A.4 Y49A3A.4 0 4.804 0.803 - 0.779 - 0.826 0.951 0.652 0.793
23. K03A1.5 sur-5 14762 4.797 0.854 - 0.803 - 0.808 0.953 0.633 0.746 Acetoacetyl-CoA synthetase [Source:UniProtKB/Swiss-Prot;Acc:Q21166]
24. F20B6.2 vha-12 60816 4.763 0.776 - 0.815 - 0.821 0.956 0.655 0.740 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
25. C15H9.7 flu-2 6738 4.763 0.845 - 0.671 - 0.875 0.952 0.695 0.725 Kynureninase [Source:UniProtKB/Swiss-Prot;Acc:Q18026]
26. F35H8.6 ugt-58 5917 4.76 0.664 - 0.760 - 0.857 0.954 0.763 0.762 Putative UDP-glucuronosyltransferase ugt-58 [Source:UniProtKB/Swiss-Prot;Acc:Q20086]
27. F57B1.3 col-159 28012 4.737 0.817 - 0.753 - 0.891 0.953 0.604 0.719 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
28. F27D9.6 dhs-29 1921 4.707 0.804 - 0.819 - 0.857 0.960 0.617 0.650 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_509294]
29. Y39A1A.19 fmo-3 1356 4.697 0.630 - 0.705 - 0.805 0.965 0.768 0.824 Dimethylaniline monooxygenase [Source:RefSeq peptide;Acc:NP_499356]
30. C15C6.1 C15C6.1 0 4.684 0.769 - 0.767 - 0.795 0.964 0.763 0.626
31. C35A5.4 C35A5.4 456 4.681 0.743 - 0.796 - 0.823 0.953 0.647 0.719 Major sperm protein [Source:RefSeq peptide;Acc:NP_505693]
32. T28C6.1 grsp-2 4342 4.679 0.787 - 0.666 - 0.783 0.956 0.717 0.770 Glycine Rich Secreted Protein [Source:RefSeq peptide;Acc:NP_001255334]
33. C28H8.11 tdo-2 5494 4.675 0.770 - 0.759 - 0.887 0.950 0.696 0.613 Tryptophan 2,3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q09474]
34. K07E3.1 K07E3.1 1574 4.66 0.956 - 0.792 - 0.669 0.884 0.664 0.695
35. F01F1.12 aldo-2 42507 4.623 0.694 - 0.645 - 0.854 0.955 0.720 0.755 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
36. T13C5.5 bca-1 8361 4.622 0.638 - 0.822 - 0.842 0.953 0.679 0.688 Beta carbonic anhydrase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22460]
37. Y58A7A.2 Y58A7A.2 0 4.619 0.841 - 0.824 - 0.779 0.952 0.658 0.565
38. F36A2.7 F36A2.7 44113 4.611 0.748 - 0.718 - 0.830 0.954 0.660 0.701
39. F38A3.1 col-81 56859 4.605 0.839 - 0.744 - 0.778 0.954 0.537 0.753 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
40. H38K22.5 gly-6 2664 4.579 0.761 - 0.808 - 0.802 0.972 0.669 0.567 Probable N-acetylgalactosaminyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O61394]
41. T21C12.2 hpd-1 22564 4.568 0.750 - 0.613 - 0.831 0.953 0.676 0.745 4-hydroxyphenylpyruvate dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q22633]
42. K03A1.2 lron-7 8745 4.494 0.748 - 0.701 - 0.758 0.957 0.643 0.687 eLRR (extracellular Leucine-Rich Repeat) ONly [Source:RefSeq peptide;Acc:NP_509227]
43. R07B1.4 gst-36 10340 4.331 0.694 - 0.729 - 0.786 0.950 0.504 0.668 Probable glutathione S-transferase gst-36 [Source:UniProtKB/Swiss-Prot;Acc:Q09607]
44. ZK1320.11 ZK1320.11 458 4.251 0.741 - 0.545 - 0.712 0.952 0.614 0.687
45. Y95B8A.2 Y95B8A.2 0 4.145 0.484 - 0.579 - 0.783 0.956 0.651 0.692
46. F54F3.1 nid-1 2615 4.03 0.707 - 0.724 - 0.672 0.952 0.413 0.562 NIDogen (basement membrane protein) [Source:RefSeq peptide;Acc:NP_001256465]
47. DH11.1 glna-2 878 3.901 - - 0.782 - 0.827 0.969 0.550 0.773 Putative glutaminase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19013]
48. F13H6.4 F13H6.4 0 3.834 0.563 - 0.528 - 0.694 0.964 0.462 0.623
49. Y53F4B.24 Y53F4B.24 754 3.831 0.731 - 0.719 - 0.752 0.952 - 0.677
50. F36H9.5 F36H9.5 0 3.791 0.768 - - - 0.852 0.956 0.585 0.630
51. F15D3.1 dys-1 2553 3.487 0.699 - 0.653 - - 0.956 0.672 0.507 Dystrophin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TW65]
52. Y59A8B.20 lon-8 951 3.313 0.280 - - - 0.774 0.950 0.666 0.643 LONg [Source:RefSeq peptide;Acc:NP_507520]
53. T12G3.4 T12G3.4 1451 3.242 0.522 - 0.525 - 0.760 0.956 0.479 -
54. K01D12.13 cdr-7 825 3.03 - - - - 0.798 0.961 0.845 0.426 CaDmium Responsive [Source:RefSeq peptide;Acc:NP_001294664]
55. Y46H3A.3 hsp-16.2 13089 3.027 - - - - 0.776 0.952 0.600 0.699 Heat shock protein Hsp-16.2 [Source:UniProtKB/Swiss-Prot;Acc:P06582]
56. Y47D3B.1 Y47D3B.1 0 3.018 - - - - 0.727 0.956 0.625 0.710
57. B0285.9 ckb-2 2183 2.83 0.294 - - - 0.693 0.959 0.404 0.480 Choline kinase B2 [Source:UniProtKB/Swiss-Prot;Acc:P46559]
58. F58A6.2 F58A6.2 0 2.808 - - - - 0.687 0.954 0.521 0.646
59. Y49F6B.10 col-71 653 2.737 - - - - 0.596 0.951 0.555 0.635 COLlagen [Source:RefSeq peptide;Acc:NP_494562]
60. M04B2.5 twk-25 0 0.961 - - - - - 0.961 - - TWiK family of potassium channels [Source:RefSeq peptide;Acc:NP_502170]

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA